FFCP PHASE1:Hg19::chr4:38806758..38806794,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:38806758..38806794,-
|short_description=p4@TLR1
|description=CAGE_peak_4_at_TLR1_5end
|association_with_transcript=-221bp_to_ENST00000515861_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7096 | |EntrezGene=7096 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11847 | |HGNC=11847 | ||
|TSSclassifier=strong | |||
|UniProt=D6RA99 | |UniProt=D6RA99 | ||
|association_with_transcript=-221bp_to_ENST00000515861_5end | |||
|cluster_id=chr4:38806758..38806794,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_4_at_TLR1_5end | |||
|id=chr4:38806758..38806794,- | |||
|ontology_enrichment_celltype=CL:0002057!1.20e-13!42;CL:0000860!3.07e-12!45;CL:0000738!3.26e-12!140;CL:0002009!3.44e-12!65;CL:0002087!2.93e-11!119;CL:0000557!3.42e-11!71;CL:0002031!4.70e-11!124;CL:0002194!8.04e-11!63;CL:0000576!8.04e-11!63;CL:0000040!8.04e-11!63;CL:0000559!8.04e-11!63;CL:0000766!8.21e-11!76;CL:0000839!1.18e-09!70;CL:0000988!5.05e-09!182;CL:0002032!9.62e-09!165;CL:0000837!9.62e-09!165;CL:0000037!2.29e-08!172;CL:0000566!2.29e-08!172;CL:0000763!4.13e-07!112;CL:0000049!4.13e-07!112 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;5.49e-08;3!UBERON:0003057;5.49e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;6.94e-07;1!DOID:0050177;6.94e-07;1!DOID:0050427;6.94e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,6.96e-07,1;DOID:0050177,6.96e-07,1;DOID:0050427,6.96e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.45e-41!115;UBERON:0001049!1.16e-18!57;UBERON:0005068!1.16e-18!57;UBERON:0006241!1.16e-18!57;UBERON:0007135!1.16e-18!57;UBERON:0002390!1.31e-18!102;UBERON:0003061!1.31e-18!102;UBERON:0002193!1.85e-17!112;UBERON:0002616!1.01e-13!59;UBERON:0002780!3.86e-13!41;UBERON:0001890!3.86e-13!41;UBERON:0006240!3.86e-13!41;UBERON:0003080!1.16e-12!42;UBERON:0001017!1.41e-12!82;UBERON:0002020!1.81e-12!34;UBERON:0003528!1.81e-12!34;UBERON:0001893!2.43e-12!34;UBERON:0000955!3.37e-12!69;UBERON:0006238!3.37e-12!69;UBERON:0002791!1.46e-11!33;UBERON:0005743!1.62e-11!86;UBERON:0003075!9.81e-11!86;UBERON:0007284!9.81e-11!86;UBERON:0000178!1.45e-10!15;UBERON:0000179!1.45e-10!15;UBERON:0000463!1.45e-10!15;UBERON:0001869!1.59e-10!32;UBERON:0002346!1.72e-10!90;UBERON:0002420!6.52e-10!9;UBERON:0007245!6.52e-10!9;UBERON:0010009!6.52e-10!9;UBERON:0010011!6.52e-10!9;UBERON:0000454!6.52e-10!9;UBERON:0002371!7.45e-10!80;UBERON:0002308!9.60e-10!9;UBERON:0000125!9.60e-10!9;UBERON:0000073!1.72e-09!94;UBERON:0001016!1.72e-09!94;UBERON:0002405!9.75e-09!115;UBERON:0001474!1.49e-08!86;UBERON:0009663!1.50e-07!7;UBERON:0003076!1.96e-07!15;UBERON:0003057!1.96e-07!15;UBERON:0000349!2.47e-07!5;UBERON:0002619!2.57e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.15e-16;15!UBERON:0000179;2.15e-16;15!UBERON:0000463;2.15e-16;15!UBERON:0002390;9.11e-14;32!UBERON:0002240;5.49e-08;3!UBERON:0005174;5.49e-08;3!UBERON:0001137;5.49e-08;3!UBERON:0002106;1.11e-07;3!UBERON:0002193;1.82e-07;42!UBERON:0009663;3.30e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.32e-16,15;UBERON:0000179,2.32e-16,15;UBERON:0000463,2.32e-16,15;UBERON:0007023,7.25e-12,114;UBERON:0002390,2.07e-11,98;UBERON:0003061,2.07e-11,98;UBERON:0001049,2.10e-10,56;UBERON:0005068,2.10e-10,56;UBERON:0006241,2.10e-10,56;UBERON:0007135,2.10e-10,56;UBERON:0002193,4.98e-10,108;UBERON:0002780,3.48e-08,41;UBERON:0001890,3.48e-08,41;UBERON:0003080,3.48e-08,41;UBERON:0006240,3.48e-08,41;UBERON:0002240,5.04e-08,3;UBERON:0005174,5.04e-08,3;UBERON:0001137,5.04e-08,3;UBERON:0002106,8.48e-08,3;UBERON:0004854,8.48e-08,3;UBERON:0009034,8.48e-08,3;UBERON:0002095,8.48e-08,3;UBERON:0004782,8.48e-08,3;UBERON:0003281,8.48e-08,3;UBERON:0009664,8.48e-08,3;UBERON:0002296,8.48e-08,3;UBERON:0005602,8.48e-08,3;UBERON:0001179,8.48e-08,3;UBERON:0006293,8.48e-08,3;UBERON:0001017,1.06e-07,81;UBERON:0000073,1.59e-07,53;UBERON:0002616,1.59e-07,53;UBERON:0009663,3.49e-07,7 | |||
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| ||
|short_description=p4@TLR1 | |||
}} | }} |
Latest revision as of 16:16, 17 September 2015
Short description: | p4@TLR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TLR1_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | -221bp_to_ENST00000515861_5end |
EntrezGene: | TLR1 |
HGNC: | 11847 |
UniProt: | D6RA99 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 2.32e-16 | 15 |
haemolymphatic fluid | 2.32e-16 | 15 |
organism substance | 2.32e-16 | 15 |
adult organism | 7.25e-12 | 114 |
hematopoietic system | 2.07e-11 | 98 |
blood island | 2.07e-11 | 98 |
neural tube | 2.10e-10 | 56 |
neural rod | 2.10e-10 | 56 |
future spinal cord | 2.10e-10 | 56 |
neural keel | 2.10e-10 | 56 |
hemolymphoid system | 4.98e-10 | 108 |
regional part of forebrain | 3.48e-08 | 41 |
forebrain | 3.48e-08 | 41 |
anterior neural tube | 3.48e-08 | 41 |
future forebrain | 3.48e-08 | 41 |
spinal cord | 5.04e-08 | 3 |
dorsal region element | 5.04e-08 | 3 |
dorsum | 5.04e-08 | 3 |
spleen | 8.48e-08 | 3 |
gastrointestinal system mesentery | 8.48e-08 | 3 |
stomach region | 8.48e-08 | 3 |
mesentery | 8.48e-08 | 3 |
gastrointestinal system serosa | 8.48e-08 | 3 |
mesentery of stomach | 8.48e-08 | 3 |
gut mesentery | 8.48e-08 | 3 |
dorsal mesentery | 8.48e-08 | 3 |
dorsal mesogastrium | 8.48e-08 | 3 |
peritoneal cavity | 8.48e-08 | 3 |
spleen primordium | 8.48e-08 | 3 |
central nervous system | 1.06e-07 | 81 |
regional part of nervous system | 1.59e-07 | 53 |
regional part of brain | 1.59e-07 | 53 |
telencephalic nucleus | 3.49e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 6.96e-07 | 1 |
monogenic disease | 6.96e-07 | 1 |
xeroderma pigmentosum | 6.96e-07 | 1 |