FFCP PHASE1:Hg19::chr5:122181128..122181143,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:122181128..122181143,+
|short_description=p2@SNX24
|description=CAGE_peak_2_at_SNX24_5end
|association_with_transcript=0bp_to_ENST00000261369_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=28966 | |EntrezGene=28966 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21533 | |HGNC=21533 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y343 | |UniProt=Q9Y343 | ||
|association_with_transcript=0bp_to_ENST00000261369_5end | |||
|cluster_id=chr5:122181128..122181143,+ | |||
|description=CAGE_peak_2_at_SNX24_5end | |||
|id=chr5:122181128..122181143,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!1.90e-10!173;UBERON:0006601!1.90e-10!173;UBERON:0000073!5.61e-10!94;UBERON:0001016!5.61e-10!94;UBERON:0004121!7.04e-10!169;UBERON:0002346!9.72e-10!90;UBERON:0007023!9.80e-10!115;UBERON:0003075!3.84e-09!86;UBERON:0007284!3.84e-09!86;UBERON:0005743!5.09e-08!86;UBERON:0001049!6.94e-08!57;UBERON:0005068!6.94e-08!57;UBERON:0006241!6.94e-08!57;UBERON:0007135!6.94e-08!57;UBERON:0001017!2.51e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.36e-10,86;UBERON:0004121,9.04e-10,171;UBERON:0000924,9.04e-10,171;UBERON:0006601,9.04e-10,171;UBERON:0010371,1.25e-09,104;UBERON:0003075,1.53e-09,82;UBERON:0007284,1.53e-09,82;UBERON:0007023,3.95e-09,114;UBERON:0001016,5.01e-09,89;UBERON:0001049,1.22e-08,56;UBERON:0005068,1.22e-08,56;UBERON:0006241,1.22e-08,56;UBERON:0007135,1.22e-08,56;UBERON:0003056,6.67e-08,61;UBERON:0000073,1.20e-07,53;UBERON:0002616,1.20e-07,53;UBERON:0010314,2.15e-07,132;UBERON:0001017,3.30e-07,81 | |||
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| ||
|short_description=p2@SNX24 | |||
}} | }} |
Latest revision as of 23:58, 19 September 2015
Short description: | p2@SNX24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SNX24_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000261369_5end |
EntrezGene: | SNX24 |
HGNC: | 21533 |
UniProt: | Q9Y343 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 3.36e-10 | 86 |
ectoderm-derived structure | 9.04e-10 | 171 |
ectoderm | 9.04e-10 | 171 |
presumptive ectoderm | 9.04e-10 | 171 |
ecto-epithelium | 1.25e-09 | 104 |
neural plate | 1.53e-09 | 82 |
presumptive neural plate | 1.53e-09 | 82 |
adult organism | 3.95e-09 | 114 |
nervous system | 5.01e-09 | 89 |
neural tube | 1.22e-08 | 56 |
neural rod | 1.22e-08 | 56 |
future spinal cord | 1.22e-08 | 56 |
neural keel | 1.22e-08 | 56 |
pre-chordal neural plate | 6.67e-08 | 61 |
regional part of nervous system | 1.20e-07 | 53 |
regional part of brain | 1.20e-07 | 53 |
structure with developmental contribution from neural crest | 2.15e-07 | 132 |
central nervous system | 3.30e-07 | 81 |