FFCP PHASE1:Hg19::chr5:155211666..155211669,+: Difference between revisions
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|id=chr5:155211666..155211669,+
|short_description=p@chr5:155211666..155211669,+
|description=CAGE_peak_at_chr5:155211666..155211669,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:155211666..155211669,+ | |||
|description=CAGE_peak_at_chr5:155211666..155211669,+ | |||
|id=chr5:155211666..155211669,+ | |||
|ontology_enrichment_celltype=CL:0000623!1.03e-08!3;CL:0000825!1.03e-08!3;CL:0000540!3.65e-07!6;CL:0000031!3.65e-07!6;CL:0000404!3.65e-07!6 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.71e-66;1!UBERON:0003056;2.93e-23;3!UBERON:0006238;2.40e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;1.03e-17;4!DOID:1325;9.89e-11;7!DOID:3904;9.89e-11;7!DOID:3905;1.21e-08;9!DOID:3093;7.70e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.03e-17,4;DOID:1325,9.89e-11,7;DOID:3904,9.89e-11,7;DOID:3905,1.21e-08,9;DOID:3093,7.48e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0002346!2.14e-16!90;UBERON:0001893!3.08e-16!34;UBERON:0001869!1.77e-15!32;UBERON:0000073!6.32e-15!94;UBERON:0001016!6.32e-15!94;UBERON:0003075!7.55e-15!86;UBERON:0007284!7.55e-15!86;UBERON:0002791!7.89e-15!33;UBERON:0001049!1.00e-14!57;UBERON:0005068!1.00e-14!57;UBERON:0006241!1.00e-14!57;UBERON:0007135!1.00e-14!57;UBERON:0002780!1.40e-14!41;UBERON:0001890!1.40e-14!41;UBERON:0006240!1.40e-14!41;UBERON:0001017!2.22e-14!82;UBERON:0002020!2.39e-14!34;UBERON:0003528!2.39e-14!34;UBERON:0003080!3.93e-14!42;UBERON:0007023!1.54e-13!115;UBERON:0002619!1.82e-13!22;UBERON:0005743!2.09e-13!86;UBERON:0002616!1.66e-12!59;UBERON:0001950!2.03e-12!20;UBERON:0000956!1.39e-11!25;UBERON:0000203!1.39e-11!25;UBERON:0000955!4.69e-11!69;UBERON:0006238!4.69e-11!69;UBERON:0003056!6.20e-11!61;UBERON:0000924!1.54e-09!173;UBERON:0006601!1.54e-09!173;UBERON:0003978!9.56e-09!3;UBERON:0009751!9.56e-09!3;UBERON:0000946!9.56e-09!3;UBERON:0002523!9.56e-09!3;UBERON:0005983!9.56e-09!3;UBERON:0002165!9.56e-09!3;UBERON:0002062!9.56e-09!3;UBERON:0007280!9.56e-09!3;UBERON:0000349!1.18e-08!5;UBERON:0004121!1.67e-08!169;UBERON:0001871!2.50e-08!7;UBERON:0002420!8.93e-07!9;UBERON:0007245!8.93e-07!9;UBERON:0010009!8.93e-07!9;UBERON:0010011!8.93e-07!9;UBERON:0000454!8.93e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.50e-14;5!UBERON:0005388;1.50e-14;5!UBERON:0001802;1.50e-14;5!UBERON:0002331;5.93e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,2.19e-12,6;UBERON:0005388,2.19e-12,6;UBERON:0001802,2.19e-12,6;UBERON:0002331,6.13e-08,10;UBERON:0000358,6.13e-08,10;UBERON:0000307,6.13e-08,10;UBERON:0000091,6.13e-08,10;UBERON:0000087,6.13e-08,10;UBERON:0007010,6.13e-08,10;UBERON:0007806,6.13e-08,10;UBERON:0008780,6.13e-08,10;UBERON:0005728,6.13e-08,10 | |||
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| ||
|short_description=p@chr5:155211666..155211669,+ | |||
}} | }} |
Latest revision as of 12:12, 30 July 2015
Short description: | p@chr5:155211666..155211669, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:155211666..155211669, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retina | 2.19e-12 | 6 |
photoreceptor array | 2.19e-12 | 6 |
posterior segment of eyeball | 2.19e-12 | 6 |
umbilical cord | 6.13e-08 | 10 |
blastocyst | 6.13e-08 | 10 |
blastula | 6.13e-08 | 10 |
bilaminar disc | 6.13e-08 | 10 |
inner cell mass | 6.13e-08 | 10 |
cleaving embryo | 6.13e-08 | 10 |
connecting stalk | 6.13e-08 | 10 |
inner cell mass derived epiblast | 6.13e-08 | 10 |
extraembryonic mesoderm | 6.13e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.03e-17 | 4 |
bronchus cancer | 9.89e-11 | 7 |
bronchogenic carcinoma | 9.89e-11 | 7 |
lung carcinoma | 1.21e-08 | 9 |
nervous system cancer | 7.48e-07 | 11 |