FFCP PHASE1:Hg19::chr5:176894537..176894587,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:176894537..176894587,-
|short_description=p3@DBN1
|description=CAGE_peak_3_at_DBN1_5end
|association_with_transcript=11bp_to_ENST00000471767_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1627 | |EntrezGene=1627 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2695 | |HGNC=2695 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_ENST00000471767_5end | |||
|cluster_id=chr5:176894537..176894587,- | |||
|description=CAGE_peak_3_at_DBN1_5end | |||
|id=chr5:176894537..176894587,- | |||
|ontology_enrichment_celltype=CL:0002321!1.82e-23!248;CL:0000220!7.11e-23!246;CL:0000055!7.54e-22!180;CL:0000222!2.83e-19!119;CL:0000393!3.56e-12!60;CL:0000211!3.56e-12!60;CL:0000183!8.31e-12!59;CL:0000213!3.38e-10!57;CL:0000215!3.38e-10!57;CL:0000680!3.95e-10!57;CL:0000056!3.95e-10!57;CL:0000355!3.95e-10!57;CL:0000187!4.40e-10!54;CL:0000057!9.02e-10!75;CL:0000192!4.24e-09!42;CL:0000514!4.24e-09!42;CL:0000359!2.54e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000192;1.82e-07;43!CL:0000359;1.94e-07;32!CL:0000393;2.92e-07;61!CL:0000211;2.92e-07;61!CL:0000213;3.72e-07;58!CL:0000215;3.72e-07;58!CL:0000071;5.52e-07;18!CL:0000115;9.10e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.16e-22,250;CL:0000222,3.85e-21,121;CL:0000393,2.44e-13,61;CL:0000211,2.44e-13,61;CL:0000213,1.97e-11,58;CL:0000215,1.97e-11,58;CL:0000187,5.05e-11,55;CL:0000680,6.25e-11,58;CL:0000056,6.25e-11,58;CL:0000355,6.25e-11,58;CL:0000192,1.01e-09,43;CL:0000514,1.01e-09,43;CL:0000057,3.05e-09,76;CL:0000115,7.04e-08,36;CL:0000359,1.49e-07,32;CL:0000071,3.42e-07,18;CL:0002546,3.42e-07,18;CL:0002078,8.29e-07,45 | |||
|ontology_enrichment_development_v019=CL:0000514;1.82e-07;43!CL:0002546;5.52e-07;18!CL:0000222;8.16e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.45e-14!312;UBERON:0002049!7.16e-14!79;UBERON:0007798!7.16e-14!79;UBERON:0000483!8.02e-14!309;UBERON:0003914!1.15e-13!118;UBERON:0001981!4.94e-13!60;UBERON:0007500!4.94e-13!60;UBERON:0004537!4.94e-13!60;UBERON:0006965!4.94e-13!60;UBERON:0001637!4.44e-12!42;UBERON:0003509!4.44e-12!42;UBERON:0004572!4.44e-12!42;UBERON:0004872!6.13e-12!84;UBERON:0000055!9.05e-12!69;UBERON:0004290!3.42e-11!70;UBERON:0000475!3.65e-11!365;UBERON:0000486!4.54e-11!82;UBERON:0005256!1.18e-10!143;UBERON:0001134!5.63e-10!61;UBERON:0002036!5.63e-10!61;UBERON:0003082!5.63e-10!61;UBERON:0000490!6.45e-10!138;UBERON:0002385!7.17e-10!63;UBERON:0001015!7.17e-10!63;UBERON:0000383!7.17e-10!63;UBERON:0000914!9.95e-10!83;UBERON:0002329!9.95e-10!83;UBERON:0003077!9.95e-10!83;UBERON:0003059!9.95e-10!83;UBERON:0007282!9.95e-10!83;UBERON:0009618!9.95e-10!83;UBERON:0007285!9.95e-10!83;UBERON:0004535!1.21e-09!110;UBERON:0004573!2.20e-09!33;UBERON:0004571!2.20e-09!33;UBERON:0001009!2.39e-09!113;UBERON:0002100!4.77e-09!216;UBERON:0000468!8.23e-09!659;UBERON:0000025!1.16e-08!194;UBERON:0004111!1.26e-07!241;UBERON:0006914!6.26e-07!25;UBERON:0000477!6.67e-07!286;UBERON:0000487!6.82e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.22e-10;42!UBERON:0003509;6.22e-10;42!UBERON:0004572;6.22e-10;42!UBERON:0004573;2.11e-09;33!UBERON:0004571;2.11e-09;33!UBERON:0003914;5.05e-09;74!UBERON:0007500;4.16e-08;56!UBERON:0001981;4.16e-08;56!UBERON:0004537;4.16e-08;56!UBERON:0006914;2.66e-07;25!UBERON:0000487;3.49e-07;22!UBERON:0004638;5.52e-07;18!UBERON:0001986;5.52e-07;18!UBERON:0004852;5.52e-07;18 | |||
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| ||
|short_description=p3@DBN1 | |||
}} | }} |
Latest revision as of 06:39, 17 September 2015
Short description: | p3@DBN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DBN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_ENST00000471767_5end |
EntrezGene: | DBN1 |
HGNC: | 2695 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.16e-22 | 250 |
mesodermal cell | 3.85e-21 | 121 |
electrically responsive cell | 2.44e-13 | 61 |
electrically active cell | 2.44e-13 | 61 |
lining cell | 1.97e-11 | 58 |
barrier cell | 1.97e-11 | 58 |
muscle cell | 5.05e-11 | 55 |
muscle precursor cell | 6.25e-11 | 58 |
myoblast | 6.25e-11 | 58 |
multi-potent skeletal muscle stem cell | 6.25e-11 | 58 |
smooth muscle cell | 1.01e-09 | 43 |
smooth muscle myoblast | 1.01e-09 | 43 |
fibroblast | 3.05e-09 | 76 |
endothelial cell | 7.04e-08 | 36 |
vascular associated smooth muscle cell | 1.49e-07 | 32 |
blood vessel endothelial cell | 3.42e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.42e-07 | 18 |
meso-epithelial cell | 8.29e-07 | 45 |