FFCP PHASE1:Hg19::chr5:42993353..42993378,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:42993353..42993378,-
|short_description=p3@uc003jnb.1
|description=CAGE_peak_3_at_uc003jnb.1_5end
|association_with_transcript=56bp_to_uc003jnb.1_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=56bp_to_uc003jnb.1_5end | |||
|cluster_id=chr5:42993353..42993378,- | |||
|coexpression_cluster_id=C4502 | |||
|description=CAGE_peak_3_at_uc003jnb.1_5end | |||
|id=chr5:42993353..42993378,- | |||
|ontology_enrichment_celltype=CL:0000766!1.58e-19!76;CL:0002057!3.36e-19!42;CL:0000860!9.52e-19!45;CL:0000557!1.55e-18!71;CL:0000738!4.51e-18!140;CL:0002320!5.11e-17!365;CL:0002009!7.47e-17!65;CL:0000048!1.19e-16!430;CL:0002194!1.54e-16!63;CL:0000576!1.54e-16!63;CL:0000040!1.54e-16!63;CL:0000559!1.54e-16!63;CL:0000839!1.59e-16!70;CL:0002031!1.71e-16!124;CL:0002087!3.05e-16!119;CL:0000134!4.49e-16!358;CL:0000988!4.94e-16!182;CL:0000037!8.86e-16!172;CL:0000566!8.86e-16!172;CL:0000723!1.78e-15!436;CL:0000034!3.22e-15!444;CL:0002032!4.99e-15!165;CL:0000837!4.99e-15!165;CL:0000763!4.51e-14!112;CL:0000049!4.51e-14!112;CL:0000115!3.48e-13!35;CL:0002371!1.09e-12!591;CL:0002139!1.37e-12!24;CL:0000219!1.67e-11!390;CL:0002078!3.14e-10!44;CL:0000071!7.35e-10!18;CL:0002546!7.35e-10!18;CL:0000144!7.10e-08!625;CL:0000003!7.65e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.82e-26;33!CL:0002057;3.82e-26;33!CL:0002139;6.58e-19;24!CL:0000473;1.95e-17;39!CL:0000234;1.95e-17;39!CL:0000576;6.51e-17;48!CL:0000115;4.34e-16;36!CL:0000071;1.87e-14;18!CL:0000766;4.93e-12;69!CL:0002078;9.19e-10;45!CL:1000413;7.40e-09;9!CL:0002087;2.53e-08;104!CL:0000763;6.92e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.95e-25,42;CL:0002057,1.95e-25,42;CL:0000738,5.23e-24,136;CL:0000766,5.40e-23,72;CL:0000473,4.76e-22,48;CL:0000234,4.76e-22,48;CL:0002087,7.40e-21,115;CL:0002031,9.44e-21,120;CL:0000037,1.89e-20,168;CL:0000557,5.79e-20,67;CL:0002139,1.19e-19,24;CL:0000115,2.46e-19,36;CL:0002032,3.95e-19,161;CL:0000837,3.95e-19,161;CL:0000988,6.99e-19,177;CL:0002009,1.36e-18,61;CL:0002194,1.42e-18,59;CL:0000576,1.42e-18,59;CL:0000040,1.42e-18,59;CL:0000559,1.42e-18,59;CL:0000839,1.96e-18,66;CL:0000763,1.53e-15,108;CL:0000049,1.53e-15,108;CL:0000071,4.58e-15,18;CL:0002546,4.58e-15,18;CL:0002078,1.32e-14,45;CL:0002320,8.30e-12,361;CL:0000134,2.27e-11,354;CL:1000413,2.88e-09,9;CL:0000048,5.35e-09,427;CL:0000219,6.06e-09,386;CL:0000034,1.66e-08,441;CL:0000723,1.94e-08,433;CL:0000213,2.14e-08,58;CL:0000215,2.14e-08,58;CL:0002543,8.82e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.05e-18;42!CL:0002546;1.87e-14;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.08e-23!112;UBERON:0002390!2.58e-21!102;UBERON:0003061!2.58e-21!102;UBERON:0002371!3.30e-20!80;UBERON:0001474!2.60e-19!86;UBERON:0003081!3.68e-18!216;UBERON:0002405!9.88e-18!115;UBERON:0004765!1.69e-17!101;UBERON:0001434!1.69e-17!101;UBERON:0002384!1.26e-16!375;UBERON:0002204!1.05e-13!167;UBERON:0001986!7.35e-10!18;UBERON:0004638!7.35e-10!18;UBERON:0004852!7.35e-10!18;UBERON:0000926!2.79e-08!448;UBERON:0004120!2.79e-08!448;UBERON:0006603!2.79e-08!448;UBERON:0000487!1.15e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.87e-14;18!UBERON:0001986;1.87e-14;18!UBERON:0004852;1.87e-14;18!UBERON:0000487;1.19e-12;22!UBERON:0006914;2.00e-10;25!UBERON:0003915;7.40e-09;9!UBERON:0004700;7.40e-09;9!UBERON:0001917;7.40e-09;9!UBERON:0000490;4.97e-07;33 | |||
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| ||
|short_description=p3@uc003jnb.1 | |||
}} | }} |
Latest revision as of 14:56, 30 July 2015
Short description: | p3@uc003jnb.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_uc003jnb.1_5end |
Coexpression cluster: | C4502_CD14_large_alveolar_embryonic_clear_acute_bronchogenic |
Association with transcript: | 56bp_to_uc003jnb.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immune system | 2.81e-25 | 93 |
hemolymphoid system | 1.79e-24 | 108 |
bone marrow | 7.30e-22 | 76 |
hematopoietic system | 2.61e-21 | 98 |
blood island | 2.61e-21 | 98 |
bone element | 2.75e-20 | 82 |
skeletal element | 1.61e-19 | 90 |
skeletal system | 1.16e-16 | 100 |
lateral plate mesoderm | 1.38e-16 | 203 |
blood vessel endothelium | 4.58e-15 | 18 |
endothelium | 4.58e-15 | 18 |
cardiovascular system endothelium | 4.58e-15 | 18 |
simple squamous epithelium | 3.63e-13 | 22 |
connective tissue | 1.80e-11 | 371 |
squamous epithelium | 7.35e-11 | 25 |
endothelial tube | 2.88e-09 | 9 |
arterial system endothelium | 2.88e-09 | 9 |
endothelium of artery | 2.88e-09 | 9 |
mesoderm | 2.61e-08 | 315 |
mesoderm-derived structure | 2.61e-08 | 315 |
presumptive mesoderm | 2.61e-08 | 315 |
musculoskeletal system | 1.41e-07 | 167 |