FFCP PHASE1:Hg19::chr5:95158375..95158485,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:95158375..95158485,-
|short_description=p1@GLRX
|description=CAGE_peak_1_at_GLRX_5end
|association_with_transcript=0bp_to_ENST00000379979,ENST00000505427,E...") |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2745 | |EntrezGene=2745 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4330 | |HGNC=4330 | ||
|TSSclassifier=strong | |||
|UniProt=P35754 | |UniProt=P35754 | ||
|association_with_transcript=0bp_to_ENST00000379979,ENST00000505427,ENST00000508780,ENST00000512469_5end | |||
|cluster_id=chr5:95158375..95158485,- | |||
|description=CAGE_peak_1_at_GLRX_5end | |||
|id=chr5:95158375..95158485,- | |||
|ontology_enrichment_celltype=CL:0000048!2.44e-33!430;CL:0000723!2.01e-30!436;CL:0000034!6.10e-29!444;CL:0002320!3.18e-25!365;CL:0000134!8.77e-25!358;CL:0000219!9.53e-17!390;CL:0002009!1.74e-16!65;CL:0000766!1.22e-15!76;CL:0002194!1.73e-15!63;CL:0000576!1.73e-15!63;CL:0000040!1.73e-15!63;CL:0000559!1.73e-15!63;CL:0000839!9.81e-15!70;CL:0000557!2.18e-14!71;CL:0002371!2.33e-14!591;CL:0002057!5.31e-14!42;CL:0000860!1.62e-12!45;CL:0000738!5.12e-11!140;CL:0002031!6.20e-11!124;CL:0000144!9.90e-11!625;CL:0002087!1.70e-10!119;CL:0000763!3.13e-08!112;CL:0000049!3.13e-08!112;CL:0000003!4.94e-08!722;CL:0000680!2.15e-07!57;CL:0000056!2.15e-07!57;CL:0000355!2.15e-07!57;CL:0000037!3.16e-07!172;CL:0000566!3.16e-07!172;CL:0000192!3.43e-07!42;CL:0000514!3.43e-07!42;CL:0002032!7.61e-07!165;CL:0000837!7.61e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.07e-10;39!CL:0000234;1.07e-10;39!CL:0000860;4.08e-10;33!CL:0002057;4.08e-10;33!CL:0000576;6.28e-09;48!CL:0000766;1.24e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.85e-34,427;CL:0000723,2.63e-31,433;CL:0000034,8.57e-30,441;CL:0002320,4.54e-26,361;CL:0000134,1.25e-25,354;CL:0002009,1.43e-17,61;CL:0000219,2.25e-17,386;CL:0000473,1.33e-16,48;CL:0000234,1.33e-16,48;CL:0002194,1.52e-16,59;CL:0000576,1.52e-16,59;CL:0000040,1.52e-16,59;CL:0000559,1.52e-16,59;CL:0000766,1.60e-16,72;CL:0000839,1.23e-15,66;CL:0000557,2.87e-15,67;CL:0000860,5.31e-14,42;CL:0002057,5.31e-14,42;CL:0000738,2.34e-11,136;CL:0002031,2.58e-11,120;CL:0002087,7.07e-11,115;CL:0000763,1.52e-08,108;CL:0000049,1.52e-08,108;CL:0000037,2.07e-07,168;CL:0000680,2.42e-07,58;CL:0000056,2.42e-07,58;CL:0000355,2.42e-07,58;CL:0000192,4.09e-07,43;CL:0000514,4.09e-07,43;CL:0002032,5.01e-07,161;CL:0000837,5.01e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;3.54e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!8.48e-24!375;UBERON:0002204!9.15e-23!167;UBERON:0002390!2.51e-17!102;UBERON:0003061!2.51e-17!102;UBERON:0002371!2.55e-16!80;UBERON:0002193!3.44e-16!112;UBERON:0002405!8.54e-15!115;UBERON:0003081!2.58e-14!216;UBERON:0004765!3.46e-14!101;UBERON:0001434!3.46e-14!101;UBERON:0001474!1.45e-13!86;UBERON:0000926!2.32e-08!448;UBERON:0004120!2.32e-08!448;UBERON:0006603!2.32e-08!448;UBERON:0001134!2.30e-07!61;UBERON:0002036!2.30e-07!61;UBERON:0003082!2.30e-07!61;UBERON:0002385!2.49e-07!63;UBERON:0001015!2.49e-07!63;UBERON:0000383!2.49e-07!63 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.33e-24,371;UBERON:0002204,7.57e-24,167;UBERON:0002390,4.65e-18,98;UBERON:0003061,4.65e-18,98;UBERON:0002371,3.33e-17,76;UBERON:0002193,8.14e-17,108;UBERON:0001434,2.73e-15,100;UBERON:0000926,3.17e-15,315;UBERON:0004120,3.17e-15,315;UBERON:0006603,3.17e-15,315;UBERON:0002405,6.55e-15,93;UBERON:0004765,7.21e-15,90;UBERON:0001474,2.96e-14,82;UBERON:0003081,4.01e-14,203;UBERON:0001134,2.56e-07,62;UBERON:0002036,2.56e-07,62;UBERON:0003082,2.56e-07,62;UBERON:0002385,2.75e-07,64;UBERON:0001015,2.75e-07,64;UBERON:0000383,2.75e-07,64 | |||
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| ||
|short_description=p1@GLRX | |||
}} | }} |
Latest revision as of 08:01, 19 September 2015
Short description: | p1@GLRX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GLRX_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000379979, ENST00000505427, ENST00000508780, ENST00000512469_5end |
EntrezGene: | GLRX |
HGNC: | 4330 |
UniProt: | P35754 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.33e-24 | 371 |
musculoskeletal system | 7.57e-24 | 167 |
hematopoietic system | 4.65e-18 | 98 |
blood island | 4.65e-18 | 98 |
bone marrow | 3.33e-17 | 76 |
hemolymphoid system | 8.14e-17 | 108 |
skeletal system | 2.73e-15 | 100 |
mesoderm | 3.17e-15 | 315 |
mesoderm-derived structure | 3.17e-15 | 315 |
presumptive mesoderm | 3.17e-15 | 315 |
immune system | 6.55e-15 | 93 |
skeletal element | 7.21e-15 | 90 |
bone element | 2.96e-14 | 82 |
lateral plate mesoderm | 4.01e-14 | 203 |
skeletal muscle tissue | 2.56e-07 | 62 |
striated muscle tissue | 2.56e-07 | 62 |
myotome | 2.56e-07 | 62 |
muscle tissue | 2.75e-07 | 64 |
musculature | 2.75e-07 | 64 |
musculature of body | 2.75e-07 | 64 |