FFCP PHASE1:Hg19::chr6:151127384..151127385,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:151127384..151127385,+
|short_description=p@chr6:151127384..151127385,+
|description=CAGE_peak_at_chr6:151127384..151127385,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:151127384..151127385,+ | |||
|description=CAGE_peak_at_chr6:151127384..151127385,+ | |||
|id=chr6:151127384..151127385,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002605;2.12e-10;3!CL:0000945;6.50e-09;24!CL:0000236;3.35e-08;13!CL:0000128;2.26e-07;7!CL:0000126;2.26e-07;7!CL:0000127;2.26e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.72e-10,3;CL:0000945,5.57e-09,24;CL:0000826,5.57e-09,24;CL:0000128,1.48e-07,7;CL:0000126,1.48e-07,7;CL:0000127,1.48e-07,7;CL:0002453,1.48e-07,7;CL:0000236,1.67e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0006965;9.96e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;8.73e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,6.10e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.32e-23!115;UBERON:0001049!2.16e-14!57;UBERON:0005068!2.16e-14!57;UBERON:0006241!2.16e-14!57;UBERON:0007135!2.16e-14!57;UBERON:0002020!2.12e-12!34;UBERON:0003528!2.12e-12!34;UBERON:0001893!6.02e-12!34;UBERON:0002791!1.37e-11!33;UBERON:0003075!2.07e-11!86;UBERON:0007284!2.07e-11!86;UBERON:0002780!2.66e-11!41;UBERON:0001890!2.66e-11!41;UBERON:0006240!2.66e-11!41;UBERON:0002616!3.19e-11!59;UBERON:0002346!3.73e-11!90;UBERON:0000956!6.59e-11!25;UBERON:0000203!6.59e-11!25;UBERON:0001869!8.50e-11!32;UBERON:0003080!8.85e-11!42;UBERON:0001017!9.91e-11!82;UBERON:0005743!4.47e-10!86;UBERON:0000955!2.49e-09!69;UBERON:0006238!2.49e-09!69;UBERON:0001950!6.92e-09!20;UBERON:0002619!1.30e-08!22;UBERON:0000073!2.26e-08!94;UBERON:0001016!2.26e-08!94;UBERON:0003056!7.43e-08!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.75e-08;49!UBERON:0000956;5.71e-08;25!UBERON:0000203;5.71e-08;25!UBERON:0003528;9.83e-08;34!UBERON:0002020;9.83e-08;34!UBERON:0001897;3.10e-07;2!UBERON:0010225;3.10e-07;2!UBERON:0002148;9.96e-07;2!UBERON:0006331;9.96e-07;2!UBERON:0009662;9.96e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,1.49e-10,82;UBERON:0007284,1.49e-10,82;UBERON:0002346,7.77e-10,86;UBERON:0001049,1.46e-09,56;UBERON:0005068,1.46e-09,56;UBERON:0006241,1.46e-09,56;UBERON:0007135,1.46e-09,56;UBERON:0010371,2.90e-08,104;UBERON:0003528,3.27e-08,34;UBERON:0002020,3.27e-08,34;UBERON:0000956,6.42e-08,25;UBERON:0000203,6.42e-08,25;UBERON:0000073,1.09e-07,53;UBERON:0002616,1.09e-07,53;UBERON:0001017,2.94e-07,81;UBERON:0001016,4.96e-07,89;UBERON:0001897,5.51e-07,2;UBERON:0010225,5.51e-07,2;UBERON:0002148,7.22e-07,2;UBERON:0006331,7.22e-07,2;UBERON:0009662,7.22e-07,2 | |||
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| ||
|short_description=p@chr6:151127384..151127385,+ | |||
}} | }} |
Latest revision as of 20:55, 30 July 2015
Short description: | p@chr6:151127384..151127385, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:151127384..151127385, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.72e-10 | 3 |
lymphocyte of B lineage | 5.57e-09 | 24 |
pro-B cell | 5.57e-09 | 24 |
oligodendrocyte | 1.48e-07 | 7 |
macroglial cell | 1.48e-07 | 7 |
astrocyte | 1.48e-07 | 7 |
oligodendrocyte precursor cell | 1.48e-07 | 7 |
B cell | 1.67e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
neural plate | 1.49e-10 | 82 |
presumptive neural plate | 1.49e-10 | 82 |
neurectoderm | 7.77e-10 | 86 |
neural tube | 1.46e-09 | 56 |
neural rod | 1.46e-09 | 56 |
future spinal cord | 1.46e-09 | 56 |
neural keel | 1.46e-09 | 56 |
ecto-epithelium | 2.90e-08 | 104 |
brain grey matter | 3.27e-08 | 34 |
gray matter | 3.27e-08 | 34 |
cerebral cortex | 6.42e-08 | 25 |
pallium | 6.42e-08 | 25 |
regional part of nervous system | 1.09e-07 | 53 |
regional part of brain | 1.09e-07 | 53 |
central nervous system | 2.94e-07 | 81 |
nervous system | 4.96e-07 | 89 |
dorsal plus ventral thalamus | 5.51e-07 | 2 |
thalamic complex | 5.51e-07 | 2 |
locus ceruleus | 7.22e-07 | 2 |
brainstem nucleus | 7.22e-07 | 2 |
hindbrain nucleus | 7.22e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 6.10e-08 | 10 |