FFCP PHASE1:Hg19::chr6:155538081..155538084,+: Difference between revisions
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|id=chr6:155538081..155538084,+
|short_description=p23@TIAM2
|description=CAGE_peak_23_at_TIAM2_5end
|association_with_transcript=-12bp_to_NM_001010927,uc003qqh.2_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26230 | |EntrezGene=26230 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11806 | |HGNC=11806 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IVF5 | |UniProt=Q8IVF5 | ||
|association_with_transcript=-12bp_to_NM_001010927,uc003qqh.2_5end | |||
|cluster_id=chr6:155538081..155538084,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_23_at_TIAM2_5end | |||
|id=chr6:155538081..155538084,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p23@TIAM2 | |||
}} | }} |
Latest revision as of 09:07, 16 September 2015
Short description: | p23@TIAM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_TIAM2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -12bp_to_NM_001010927, uc003qqh.2_5end |
EntrezGene: | TIAM2 |
HGNC: | 11806 |
UniProt: | Q8IVF5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
middle frontal gyrus | 7.05e-34 | 2 |
neocortex | 3.84e-29 | 20 |
regional part of cerebral cortex | 1.01e-26 | 22 |
cerebral cortex | 8.76e-24 | 25 |
pallium | 8.76e-24 | 25 |
frontal cortex | 4.09e-23 | 3 |
regional part of telencephalon | 5.33e-19 | 32 |
cerebral hemisphere | 5.33e-19 | 32 |
brain grey matter | 5.55e-18 | 34 |
gray matter | 5.55e-18 | 34 |
telencephalon | 5.55e-18 | 34 |
regional part of forebrain | 3.52e-15 | 41 |
forebrain | 3.52e-15 | 41 |
anterior neural tube | 3.52e-15 | 41 |
future forebrain | 3.52e-15 | 41 |
parietal lobe | 1.40e-14 | 5 |
occipital lobe | 1.60e-14 | 5 |
gyrus | 2.74e-12 | 6 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
pre-chordal neural plate | 1.22e-10 | 61 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |