FFCP PHASE1:Hg19::chr6:24666986..24667030,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:24666986..24667030,-
|short_description=p2@TDP2
|description=CAGE_peak_2_at_TDP2_5end
|association_with_transcript=0bp_to_ENST00000480495_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51567 | |EntrezGene=51567 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17768 | |HGNC=17768 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000480495_5end | |||
|cluster_id=chr6:24666986..24667030,- | |||
|description=CAGE_peak_2_at_TDP2_5end | |||
|id=chr6:24666986..24667030,- | |||
|ontology_enrichment_celltype=CL:0000037!1.92e-25!172;CL:0000566!1.92e-25!172;CL:0000738!1.42e-24!140;CL:0002032!1.71e-24!165;CL:0000837!1.71e-24!165;CL:0000763!2.47e-23!112;CL:0000049!2.47e-23!112;CL:0000766!7.44e-23!76;CL:0000988!1.95e-22!182;CL:0000839!6.54e-20!70;CL:0002031!7.49e-20!124;CL:0000557!4.95e-19!71;CL:0002087!1.45e-18!119;CL:0002009!2.14e-18!65;CL:0002194!4.01e-18!63;CL:0000576!4.01e-18!63;CL:0000040!4.01e-18!63;CL:0000559!4.01e-18!63;CL:0000860!1.69e-15!45;CL:0002057!3.40e-14!42;CL:0000134!4.79e-08!358;CL:0002320!3.73e-07!365;CL:0000084!5.02e-07!25;CL:0000827!5.02e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000473;8.60e-18;39!CL:0000234;8.60e-18;39!CL:0000860;1.62e-17;33!CL:0002057;1.62e-17;33!CL:0000576;8.43e-10;48!CL:0000766;2.16e-09;69!CL:0000763;3.20e-07;100!CL:0000084;3.84e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.75e-24,168;CL:0002032,3.49e-23,161;CL:0000837,3.49e-23,161;CL:0000738,9.31e-23,136;CL:0000988,1.95e-22,177;CL:0000763,2.23e-22,108;CL:0000049,2.23e-22,108;CL:0000766,2.36e-21,72;CL:0000839,2.64e-18,66;CL:0002031,4.66e-18,120;CL:0000473,6.58e-18,48;CL:0000234,6.58e-18,48;CL:0000557,2.00e-17,67;CL:0002087,9.56e-17,115;CL:0002009,1.01e-16,61;CL:0002194,2.00e-16,59;CL:0000576,2.00e-16,59;CL:0000040,2.00e-16,59;CL:0000559,2.00e-16,59;CL:0000860,3.03e-14,42;CL:0002057,3.03e-14,42;CL:0000134,2.34e-07,354;CL:0000084,3.90e-07,25;CL:0000827,3.90e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;6.20e-11;42!CL:0000049;3.62e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.59e-22!102;UBERON:0003061!1.59e-22!102;UBERON:0002193!5.61e-19!112;UBERON:0002371!5.13e-17!80;UBERON:0001474!7.24e-15!86;UBERON:0002405!3.09e-13!115;UBERON:0004765!6.09e-13!101;UBERON:0001434!6.09e-13!101;UBERON:0000178!2.70e-07!15;UBERON:0000179!2.70e-07!15;UBERON:0000463!2.70e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.43e-08;15!UBERON:0000179;6.43e-08;15!UBERON:0000463;6.43e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.71e-21,98;UBERON:0003061,4.71e-21,98;UBERON:0002193,3.41e-18,108;UBERON:0002371,1.11e-15,76;UBERON:0001474,1.26e-13,82;UBERON:0002405,1.08e-12,93;UBERON:0004765,4.47e-11,90;UBERON:0001434,1.02e-10,100;UBERON:0000178,1.13e-07,15;UBERON:0000179,1.13e-07,15;UBERON:0000463,1.13e-07,15 | |||
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| ||
|short_description=p2@TDP2 | |||
}} | }} |
Latest revision as of 06:18, 17 September 2015
Short description: | p2@TDP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TDP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000480495_5end |
EntrezGene: | TDP2 |
HGNC: | 17768 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.75e-24 | 168 |
hematopoietic oligopotent progenitor cell | 3.49e-23 | 161 |
hematopoietic multipotent progenitor cell | 3.49e-23 | 161 |
leukocyte | 9.31e-23 | 136 |
hematopoietic cell | 1.95e-22 | 177 |
myeloid cell | 2.23e-22 | 108 |
common myeloid progenitor | 2.23e-22 | 108 |
myeloid leukocyte | 2.36e-21 | 72 |
myeloid lineage restricted progenitor cell | 2.64e-18 | 66 |
hematopoietic lineage restricted progenitor cell | 4.66e-18 | 120 |
defensive cell | 6.58e-18 | 48 |
phagocyte | 6.58e-18 | 48 |
granulocyte monocyte progenitor cell | 2.00e-17 | 67 |
nongranular leukocyte | 9.56e-17 | 115 |
macrophage dendritic cell progenitor | 1.01e-16 | 61 |
monopoietic cell | 2.00e-16 | 59 |
monocyte | 2.00e-16 | 59 |
monoblast | 2.00e-16 | 59 |
promonocyte | 2.00e-16 | 59 |
classical monocyte | 3.03e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.03e-14 | 42 |
mesenchymal cell | 2.34e-07 | 354 |
T cell | 3.90e-07 | 25 |
pro-T cell | 3.90e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.71e-21 | 98 |
blood island | 4.71e-21 | 98 |
hemolymphoid system | 3.41e-18 | 108 |
bone marrow | 1.11e-15 | 76 |
bone element | 1.26e-13 | 82 |
immune system | 1.08e-12 | 93 |
skeletal element | 4.47e-11 | 90 |
skeletal system | 1.02e-10 | 100 |
blood | 1.13e-07 | 15 |
haemolymphatic fluid | 1.13e-07 | 15 |
organism substance | 1.13e-07 | 15 |