FFCP PHASE1:Hg19::chr6:56820018..56820029,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:56820018..56820029,+
|short_description=p16@BEND6
|description=CAGE_peak_16_at_BEND6_5end
|association_with_transcript=-60bp_to_ENST00000370746,ENST0000049...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=221336 | |EntrezGene=221336 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20871 | |HGNC=20871 | ||
|TSSclassifier=strong | |||
|UniProt=Q5SZJ8 | |UniProt=Q5SZJ8 | ||
|association_with_transcript=-60bp_to_ENST00000370746,ENST00000495359_5end | |||
|cluster_id=chr6:56820018..56820029,+ | |||
|description=CAGE_peak_16_at_BEND6_5end | |||
|id=chr6:56820018..56820029,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.15e-24!57;UBERON:0005068!8.15e-24!57;UBERON:0006241!8.15e-24!57;UBERON:0007135!8.15e-24!57;UBERON:0000955!3.42e-21!69;UBERON:0006238!3.42e-21!69;UBERON:0001017!5.58e-21!82;UBERON:0002616!7.06e-21!59;UBERON:0005743!1.29e-19!86;UBERON:0000073!2.79e-18!94;UBERON:0001016!2.79e-18!94;UBERON:0003075!4.62e-17!86;UBERON:0007284!4.62e-17!86;UBERON:0002020!4.13e-16!34;UBERON:0003528!4.13e-16!34;UBERON:0001893!5.92e-16!34;UBERON:0002346!6.00e-16!90;UBERON:0001869!2.92e-15!32;UBERON:0002619!3.02e-15!22;UBERON:0002791!2.36e-14!33;UBERON:0000033!2.44e-14!123;UBERON:0002780!2.84e-14!41;UBERON:0001890!2.84e-14!41;UBERON:0006240!2.84e-14!41;UBERON:0001950!3.27e-14!20;UBERON:0003080!7.89e-14!42;UBERON:0000153!2.95e-13!129;UBERON:0007811!2.95e-13!129;UBERON:0000956!4.17e-13!25;UBERON:0000203!4.17e-13!25;UBERON:0004733!1.56e-12!12;UBERON:0002028!1.56e-12!12;UBERON:0007277!1.56e-12!12;UBERON:0003076!3.30e-12!15;UBERON:0003057!3.30e-12!15;UBERON:0007023!3.98e-12!115;UBERON:0004732!1.92e-11!13;UBERON:0002298!3.32e-11!8;UBERON:0004121!7.29e-11!169;UBERON:0000200!1.58e-10!6;UBERON:0000924!2.14e-10!173;UBERON:0006601!2.14e-10!173;UBERON:0003056!3.11e-09!61;UBERON:0000988!1.17e-08!3;UBERON:0001896!2.92e-08!3;UBERON:0005290!2.92e-08!3;UBERON:0010096!2.92e-08!3;UBERON:0002771!4.74e-08!3;UBERON:0002680!4.96e-07!9;UBERON:0001895!4.96e-07!9;UBERON:0010092!4.96e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000988;8.98e-131;3!UBERON:0002298;2.83e-66;6!UBERON:0002148;4.52e-50;2!UBERON:0006331;4.52e-50;2!UBERON:0009662;4.52e-50;2!UBERON:0002680;9.75e-45;9!UBERON:0001895;9.75e-45;9!UBERON:0004733;5.98e-34;12!UBERON:0002028;5.98e-34;12!UBERON:0004732;1.86e-31;13!UBERON:0000125;2.45e-12;9!UBERON:0002308;2.45e-12;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000988,8.98e-131,3;UBERON:0002298,2.83e-66,6;UBERON:0002148,4.52e-50,2;UBERON:0006331,4.52e-50,2;UBERON:0009662,4.52e-50,2;UBERON:0002680,9.75e-45,9;UBERON:0001895,9.75e-45,9;UBERON:0010092,9.75e-45,9;UBERON:0004733,5.98e-34,12;UBERON:0002028,5.98e-34,12;UBERON:0007277,5.98e-34,12;UBERON:0004732,1.86e-31,13;UBERON:0003076,1.82e-27,15;UBERON:0003057,1.82e-27,15;UBERON:0000125,2.45e-12,9;UBERON:0002308,2.45e-12,9;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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| ||
|short_description=p16@BEND6 | |||
}} | }} |
Latest revision as of 10:25, 19 September 2015
Short description: | p16@BEND6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_BEND6_5end |
Coexpression cluster: | NA |
Association with transcript: | -60bp_to_ENST00000370746, ENST00000495359_5end |
EntrezGene: | BEND6 |
HGNC: | 20871 |
UniProt: | Q5SZJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pons | 8.98e-131 | 3 |
brainstem | 2.83e-66 | 6 |
locus ceruleus | 4.52e-50 | 2 |
brainstem nucleus | 4.52e-50 | 2 |
hindbrain nucleus | 4.52e-50 | 2 |
regional part of metencephalon | 9.75e-45 | 9 |
metencephalon | 9.75e-45 | 9 |
future metencephalon | 9.75e-45 | 9 |
segmental subdivision of hindbrain | 5.98e-34 | 12 |
hindbrain | 5.98e-34 | 12 |
presumptive hindbrain | 5.98e-34 | 12 |
segmental subdivision of nervous system | 1.86e-31 | 13 |
posterior neural tube | 1.82e-27 | 15 |
chordal neural plate | 1.82e-27 | 15 |
neural nucleus | 2.45e-12 | 9 |
nucleus of brain | 2.45e-12 | 9 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |