FFCP PHASE1:Hg19::chr7:100136919..100136924,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:100136919..100136924,+
|short_description=p4@AGFG2
|description=CAGE_peak_4_at_AGFG2_5end
|association_with_transcript=37bp_to_ENST00000262935_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3268 | |EntrezGene=3268 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5177 | |HGNC=5177 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=37bp_to_ENST00000262935_5end | |||
|cluster_id=chr7:100136919..100136924,+ | |||
|description=CAGE_peak_4_at_AGFG2_5end | |||
|id=chr7:100136919..100136924,+ | |||
|ontology_enrichment_celltype=CL:0002139!8.56e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002363;2.31e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,3.62e-12,2;CL:0000008,3.62e-12,2 | |||
|ontology_enrichment_development_v019=CL:0000008;2.31e-12;2!UBERON:0010122;2.31e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.15e-10!115;UBERON:0000477!4.31e-09!286;UBERON:0001049!4.70e-07!57;UBERON:0005068!4.70e-07!57;UBERON:0006241!4.70e-07!57;UBERON:0007135!4.70e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;2.62e-23;1!UBERON:0001873;2.31e-12;2!UBERON:0003566;2.31e-12;2!UBERON:0001777;2.31e-12;2!UBERON:0002331;8.45e-10;10!UBERON:0001896;1.12e-08;3!UBERON:0005383;1.12e-08;3!UBERON:0005290;1.12e-08;3!UBERON:0005382;1.12e-08;3!UBERON:0002390;6.43e-07;32!UBERON:0000178;7.86e-07;15!UBERON:0000179;7.86e-07;15!UBERON:0000463;7.86e-07;15!UBERON:0000369;8.14e-07;4!UBERON:0002435;8.14e-07;4!UBERON:0003891;8.14e-07;4!UBERON:0000964;8.14e-07;4!UBERON:0010409;8.14e-07;4!UBERON:0000204;8.14e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,2.62e-23,1;UBERON:0001873,2.59e-12,2;UBERON:0010122,2.59e-12,2;UBERON:0003566,3.62e-12,2;UBERON:0001777,3.62e-12,2;UBERON:0002331,7.08e-10,10;UBERON:0000358,7.08e-10,10;UBERON:0000307,7.08e-10,10;UBERON:0000091,7.08e-10,10;UBERON:0000087,7.08e-10,10;UBERON:0007010,7.08e-10,10;UBERON:0007806,7.08e-10,10;UBERON:0008780,7.08e-10,10;UBERON:0005728,7.08e-10,10;UBERON:0001896,9.66e-09,3;UBERON:0005290,9.66e-09,3;UBERON:0010096,9.66e-09,3;UBERON:0005383,1.21e-08,3;UBERON:0005382,1.21e-08,3;UBERON:0000178,6.99e-07,15;UBERON:0000179,6.99e-07,15;UBERON:0000463,6.99e-07,15;UBERON:0000369,8.61e-07,4;UBERON:0002435,8.61e-07,4;UBERON:0000204,8.61e-07,4;UBERON:0010082,8.61e-07,4 | |||
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| ||
|short_description=p4@AGFG2 | |||
}} | }} |
Latest revision as of 07:23, 20 September 2015
Short description: | p4@AGFG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AGFG2_5end |
Coexpression cluster: | NA |
Association with transcript: | 37bp_to_ENST00000262935_5end |
EntrezGene: | AGFG2 |
HGNC: | 5177 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 3.62e-12 | 2 |
migratory cranial neural crest cell | 3.62e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 2.62e-23 | 1 |
caudate nucleus | 2.59e-12 | 2 |
future caudate nucleus | 2.59e-12 | 2 |
head connective tissue | 3.62e-12 | 2 |
substantia propria of cornea | 3.62e-12 | 2 |
umbilical cord | 7.08e-10 | 10 |
blastocyst | 7.08e-10 | 10 |
blastula | 7.08e-10 | 10 |
bilaminar disc | 7.08e-10 | 10 |
inner cell mass | 7.08e-10 | 10 |
cleaving embryo | 7.08e-10 | 10 |
connecting stalk | 7.08e-10 | 10 |
inner cell mass derived epiblast | 7.08e-10 | 10 |
extraembryonic mesoderm | 7.08e-10 | 10 |
medulla oblongata | 9.66e-09 | 3 |
myelencephalon | 9.66e-09 | 3 |
future myelencephalon | 9.66e-09 | 3 |
caudate-putamen | 1.21e-08 | 3 |
dorsal striatum | 1.21e-08 | 3 |
blood | 6.99e-07 | 15 |
haemolymphatic fluid | 6.99e-07 | 15 |
organism substance | 6.99e-07 | 15 |
corpus striatum | 8.61e-07 | 4 |
striatum | 8.61e-07 | 4 |
ventral part of telencephalon | 8.61e-07 | 4 |
future corpus striatum | 8.61e-07 | 4 |