FFCP PHASE1:Hg19::chr7:116654958..116655009,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:116654958..116655009,+
|short_description=p4@ST7
|description=CAGE_peak_4_at_ST7_5end
|association_with_transcript=0bp_to_ENST00000449366_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7982 | |EntrezGene=7982 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11351 | |HGNC=11351 | ||
|TSSclassifier=strong | |||
|UniProt=C9JWK8 | |UniProt=C9JWK8 | ||
|association_with_transcript=0bp_to_ENST00000449366_5end | |||
|cluster_id=chr7:116654958..116655009,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_4_at_ST7_5end | |||
|id=chr7:116654958..116655009,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000990;4.05e-11;8!CL:0000097;1.48e-09;5!CL:0000451;9.86e-09;10!CL:0000453;3.35e-08;5!CL:0000235;1.41e-07;6!CL:0000840;6.12e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.35e-11,177;CL:0002032,3.22e-11,161;CL:0000837,3.22e-11,161;CL:0000990,4.41e-11,8;CL:0000037,9.55e-11,168;CL:0000763,1.08e-10,108;CL:0000049,1.08e-10,108;CL:0000097,1.50e-09,5;CL:0002028,1.50e-09,5;CL:0000451,1.05e-08,10;CL:0000453,3.70e-08,5;CL:0000235,1.94e-07,6;CL:0000840,6.56e-07,5;CL:0001029,6.56e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!3.16e-10!31;DOID:1240!1.72e-08!39;DOID:2531!2.21e-08!51;DOID:0060083!2.21e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.34e-11;31!DOID:1036;8.98e-10;8!DOID:1240;7.08e-09;39!DOID:2531;9.32e-09;51!DOID:0060083;9.32e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.89e-12,51;DOID:0060083,4.89e-12,51;DOID:8692,8.14e-12,31;DOID:1240,1.24e-10,39;DOID:1036,8.45e-10,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.74e-10!115;UBERON:0000478!1.06e-07!24;UBERON:0005631!7.08e-07!14;UBERON:0000158!7.08e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.61e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000478,2.69e-08,24;UBERON:0005631,1.24e-07,14;UBERON:0000158,1.24e-07,14 | |||
|phase1_expression=0.363356758541113,0.642301571672949,1.26858963686374,0,0.893922188854576,2.61701557230111,0,0,0,0.245733936501509,0.697801167972428,4.36882744260345,9.75937819445278,0,0,0.672325146451775,0,0,0,0,0,0,0.286235987131057,0,0.627713197974014,21.0136865806866,21.3461532569859,26.7616656466509,0,0,0,0,0,0,8.21152326151197,7.81930778680818,1.46800219667424,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0,0,0,1.1384259382189,0,0,0,0,7.11137028892708,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0.267540828089713,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895037932904712,0,0,0,0.795285947051099,0,0,0,0,2.35762335895883,0,0,31.805644578159,37.9602827312403,30.3144149983013,0,0,0,0.596287222100115,0,0.347140501607594,0,0.838998872419812,0.275118041940067,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.506522046658319,0.662045904066094,1.14734648299525,0.354668382198357,1.12135520028461,0,1.2333377420858,1.24484414159907,2.2900814251847,1.30769522490767,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43723628363248,0,0,0,0,0,0,1.47461838108027,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0,0.70445216541493,0.144366447761074,0,0,0,0,1.47730203652438,9.36017060556951,2.52672975890838,0,0,0.283550194484773,0.358234090811393,0,0.383382679165211,451.279525912684,78.8913968758505,68.0036218973732,73.9335361029012,61.8587923789262,0.698476837213859,0,2.34434894420094,0,0.308482478109971,0,0,0.112131084345361,0.87192013766656,0.5867062865676,0.646358578788889,0,0,0.531876233169741,0,0,1.41849132023278,0,0.142977993658148,0.542621605391443,0,0.325736184293735,0.355391948742546,0,0,0,0.099972991182057,1.2162378064119,1.00451418286425,2.10833939483032,0.239624855491583,0,0,0.144781306667579,0,0,2.35378802386407,0,0,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0.300946099727719,0,0,0.664225598535437,0,0,0.391602314925481,0,0.206768026122887,0,0.106727557803444,2.42502057157008,18.3078983461547,6.35019615992329,0.496215615637554,0.920771839728375,0.280660094433074,2.81906128362542,1.02341449813341,0.965123526861645,0,0,0,0.492762936082855,0.519254429183621,0.116210378459959,0,0,0.184161977871793,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0.510281115829547,0,0,0,0,0,0,0,42.0978963160194,40.7839303598845,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0.290012154876366,0.308097234229289,0,0.275673144969061,0.214840489736547,0,0.255679882248303,0.178064071293475,0.165284915360978,0,0.127612712494584,0,0,0.94443704049192,0,0.616067160352178,1.06461206063404,0,0.18532421910392,0.429374660225974,1.86079184679834,5.06207079549961,1.90630193923825,0.511795582622668,0,0,0,0.719489830333259,1.37268514868027,0.235624804691373,0.202182481573316,0,0.421258456238981,0,0.487426979262569,0,0.136499911407986,0,0,0,0,2.19225442626881,0,0,1.01455188481352,0,0.563391205064483,0.286822704408103,0.392996164052485,1.07001315444375,0.709522128141196,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0.507447609232169,2.29391162142713,0.569647187174163,0,0,2.59389324477087,1.08006287447623,0.79312517629427,0,0,0,0.371606350251437,0,0,0,5.38864302868605,0.5745161103971,0.211673582723883,4.86932910411833,1.12318871245384,0,0.94007937463814,0,0,0.321176150207399,0.201799707191048,0,1.71752672377882,0.307240764308458,0.223676107892416,0.166849141711909,3.12620952643264,17.5395889554003,11.0778659052941,2.43410110628385,11.3244469119259,8.45922030527097,0,1.17206543417515,0,0,0,27.9331047143097,0.890894042497916,6.14321404198464,0.994147647766298,0,0,0,0,0.398495976502139,0.552567831062295,0.503865495708552,0,21.6629257611482,0.311039587661807,0,0,0.511572370226872,0.789147245095469,0,1.11136990144637,1.93866549219044,0.371072392647405,0,0,0,0,0,0,0,7.92909758455369,9.91455685503065,0.173624994933292,0.885741385813839,0.120596438625408,0,0,0,0.438770794307945,0,0,0.384751292518985,0,0,0,0,11.803042910081,0.0915975934018623,3.19820865611181,0,3.92450640987562,14.9590513710141,13.5357396370308,15.4889402111014,21.4811631329079,49.5257242410123,25.4298526368606,0,0,0,0.432777279484182,0,0,0,28.4660283533397,19.0288465977614,23.0772508407056,0.269604531922708,0,0.234264445725339,0,0,0,2.36750641709634,0,0.30607276163049,0.189559738885464,3.30711522711884,0.518440956986236,0,0,0,0,0,0,0,0.0979923974143777,0,1.57254001417827,11.0071060781835,0,0,0,0.290967049465258,0,0,0,0,0.379864775735272,0,0,0.640358984218058,0.999048047910651,0.288180834308212,0,1.54435498075768,0,0,0,0,0,0,0.288950589901519,0,0,0,0,5.25774708558629,2.79282401272254,1.83328339209347,0,0.599037001496973,0.858452096273142,0.22317145744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| 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| ||
|short_description=p4@ST7 | |||
}} | }} |
Latest revision as of 19:16, 15 September 2015
Short description: | p4@ST7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ST7_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_ENST00000449366_5end |
EntrezGene: | ST7 |
HGNC: | 11351 |
UniProt: | C9JWK8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.35e-11 | 177 |
hematopoietic oligopotent progenitor cell | 3.22e-11 | 161 |
hematopoietic multipotent progenitor cell | 3.22e-11 | 161 |
conventional dendritic cell | 4.41e-11 | 8 |
hematopoietic stem cell | 9.55e-11 | 168 |
myeloid cell | 1.08e-10 | 108 |
common myeloid progenitor | 1.08e-10 | 108 |
mast cell | 1.50e-09 | 5 |
basophil mast progenitor cell | 1.50e-09 | 5 |
dendritic cell | 1.05e-08 | 10 |
Langerhans cell | 3.70e-08 | 5 |
macrophage | 1.94e-07 | 6 |
immature conventional dendritic cell | 6.56e-07 | 5 |
common dendritic progenitor | 6.56e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic structure | 2.69e-08 | 24 |
extraembryonic membrane | 1.24e-07 | 14 |
membranous layer | 1.24e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.89e-12 | 51 |
immune system cancer | 4.89e-12 | 51 |
myeloid leukemia | 8.14e-12 | 31 |
leukemia | 1.24e-10 | 39 |
chronic leukemia | 8.45e-10 | 8 |