FFCP PHASE1:Hg19::chr7:138145282..138145297,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:138145282..138145297,+
|short_description=p6@TRIM24
|description=CAGE_peak_6_at_TRIM24_5end
|association_with_transcript=0bp_to_ENST00000476785_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8805 | |EntrezGene=8805 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11812 | |HGNC=11812 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000476785_5end | |||
|cluster_id=chr7:138145282..138145297,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_6_at_TRIM24_5end | |||
|id=chr7:138145282..138145297,+ | |||
|ontology_enrichment_celltype=CL:0000163!3.72e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000047;6.28e-25;2!CL:0000097;8.38e-22;5!CL:0000163;2.14e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,5.48e-22,5;CL:0002028,5.48e-22,5;CL:0000163,1.70e-12,9;CL:0000047,6.24e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.70e-13;1 | |||
|ontology_enrichment_disease=DOID:0050686!5.89e-07!137;DOID:14566!9.56e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3371;1.82e-13;1!DOID:4549;1.82e-13;1!DOID:5861;1.82e-13;1!DOID:6496;1.82e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.82e-13,1;DOID:4549,1.82e-13,1;DOID:5861,1.82e-13,1;DOID:6496,1.82e-13,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;5.70e-13;1!UBERON:0001785;5.70e-13;1!UBERON:0002464;5.70e-13;1!UBERON:0004904;5.70e-13;1!UBERON:0001021;5.70e-13;1!UBERON:0003714;4.04e-07;2!UBERON:0005162;4.04e-07;2!UBERON:0000122;4.04e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,4.23e-13,1;UBERON:0001785,4.23e-13,1;UBERON:0002464,4.23e-13,1;UBERON:0004904,4.23e-13,1;UBERON:0001021,4.23e-13,1;UBERON:0003902,4.23e-13,1;UBERON:0005425,4.23e-13,1;UBERON:0003714,3.48e-07,2;UBERON:0005162,3.48e-07,2;UBERON:0000122,3.48e-07,2 | |||
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| ||
|short_description=p6@TRIM24 | |||
}} | }} |
Latest revision as of 15:02, 16 September 2015
Short description: | p6@TRIM24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TRIM24_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_ENST00000476785_5end |
EntrezGene: | TRIM24 |
HGNC: | 11812 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 5.48e-22 | 5 |
basophil mast progenitor cell | 5.48e-22 | 5 |
endocrine cell | 1.70e-12 | 9 |
neuronal stem cell | 6.24e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 4.23e-13 | 1 |
cranial nerve | 4.23e-13 | 1 |
nerve trunk | 4.23e-13 | 1 |
nerve connecting eye with brain | 4.23e-13 | 1 |
nerve | 4.23e-13 | 1 |
retinal neural layer | 4.23e-13 | 1 |
presumptive neural retina | 4.23e-13 | 1 |
neural tissue | 3.48e-07 | 2 |
multi cell component structure | 3.48e-07 | 2 |
neuron projection bundle | 3.48e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.82e-13 | 1 |
extraosseous chondrosarcoma | 1.82e-13 | 1 |
myxoid chondrosarcoma | 1.82e-13 | 1 |
extraskeletal myxoid chondrosarcoma | 1.82e-13 | 1 |