FFCP PHASE1:Hg19::chr7:17338845..17338876,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:17338845..17338876,+
|short_description=p1@AB384754
|description=CAGE_peak_1_at_AB384754_5end
|association_with_transcript=-10bp_to_AB384754_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_AB384754_5end | |||
|cluster_id=chr7:17338845..17338876,+ | |||
|coexpression_cluster_id=C4670 | |||
|description=CAGE_peak_1_at_AB384754_5end | |||
|id=chr7:17338845..17338876,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.32e-21!42;CL:0000557!1.52e-20!71;CL:0000860!5.19e-20!45;CL:0000766!6.22e-19!76;CL:0000839!1.66e-17!70;CL:0002009!3.09e-17!65;CL:0002194!4.04e-16!63;CL:0000576!4.04e-16!63;CL:0000040!4.04e-16!63;CL:0000559!4.04e-16!63;CL:0000738!5.53e-12!140;CL:0002031!8.77e-11!124;CL:0002320!4.05e-10!365;CL:0000134!6.56e-10!358;CL:0000763!1.41e-09!112;CL:0000049!1.41e-09!112;CL:0002087!1.85e-09!119;CL:0000219!7.76e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.16e-40;33!CL:0002057;1.16e-40;33!CL:0000473;4.97e-31;39!CL:0000234;4.97e-31;39!CL:0000576;2.09e-21;48!CL:0000766;1.87e-18;69!CL:0000097;4.51e-09;5!CL:0002087;3.01e-08;104!CL:0000738;4.77e-08;136!CL:0000763;8.31e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.64e-41,42;CL:0002057,6.64e-41,42;CL:0000557,3.42e-40,67;CL:0000473,1.09e-38,48;CL:0000234,1.09e-38,48;CL:0000766,2.76e-38,72;CL:0000839,5.34e-35,66;CL:0002009,1.25e-32,61;CL:0002194,4.27e-30,59;CL:0000576,4.27e-30,59;CL:0000040,4.27e-30,59;CL:0000559,4.27e-30,59;CL:0000738,4.94e-30,136;CL:0002031,7.61e-26,120;CL:0000763,2.14e-25,108;CL:0000049,2.14e-25,108;CL:0000988,4.52e-22,177;CL:0002087,4.84e-22,115;CL:0000037,1.27e-21,168;CL:0002032,1.96e-20,161;CL:0000837,1.96e-20,161;CL:0000134,9.29e-16,354;CL:0002320,5.66e-15,361;CL:0000219,3.05e-12,386;CL:0000048,1.61e-11,427;CL:0000723,1.73e-11,433;CL:0000034,2.72e-11,441;CL:0000097,5.49e-09,5;CL:0002028,5.49e-09,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.80e-30;42!CL:0000049;3.39e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.57e-20!80;UBERON:0001474!2.74e-19!86;UBERON:0004765!1.15e-18!101;UBERON:0001434!1.15e-18!101;UBERON:0002390!9.27e-17!102;UBERON:0003061!9.27e-17!102;UBERON:0002193!2.89e-15!112;UBERON:0002405!6.25e-15!115;UBERON:0002384!3.26e-10!375;UBERON:0002204!2.01e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.75e-35,76;UBERON:0001474,1.57e-33,82;UBERON:0001434,3.37e-30,100;UBERON:0002390,1.21e-29,98;UBERON:0003061,1.21e-29,98;UBERON:0004765,3.45e-29,90;UBERON:0002405,2.92e-26,93;UBERON:0002193,2.00e-25,108;UBERON:0002204,3.02e-18,167;UBERON:0002384,1.04e-15,371;UBERON:0003081,2.08e-12,203;UBERON:0000926,8.00e-07,315;UBERON:0004120,8.00e-07,315;UBERON:0006603,8.00e-07,315 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0.331397375727916,0,0,0,0,0,0.204000691244253,0.626909442956176,0,0.273748850145768,0.125542639594803,0,0,0,1.96682138424452,1.91914699048606,1.70297735647684,0.919421224478927,0.30120591877825,0,0,0,0.293600439334847,3.32397245119126,9.42558903109666,8.24641308720237,0.447830948479849,0.32389366601898,0.77272670290256,2.76256653681173,2.26725566213286,4.12392904019288,3.71886459049095,6.57868620834921,4.95530193432166,2.8769239232215,2.56160706529101,2.12834006899727,5.17118521104928,3.87290810150296,1.35426486594342,2.44715041405386,2.45615535052061,2.9214052977861,3.06083892370903,2.24650318953266,2.55734850319616,2.96866170168044,3.59034583718937,2.55734850319616,8.9964863974861,6.24123747160254,10.5879782329248,2.51248665256743,5.73631210262222,2.82345498116652,4.84319602106695,6.62899744777616,3.79754864929061,0.422510572623884,0.850417199860174,0.209658645508376,0.786300418025466,0.300353785683013,1.28580469357664,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,2.34894875748376,1.14681968437569,0,1.12101712596307,0.526768169550154,0.786839080455332,6.28817220398664,2.2616164889946,0.334372990781356,0.651844533267181,0,0,0.668462741311041,0.883817722424512,0.664601683750863,0,0.512365278902701,0.390178042679635,0.328875809207352,0.552700035571697,0.289803085735052,0.14828656316206,0,0,0.226618685395132,0,0,0.506039384039006,0.637130828648193,0,0,0,0.127986611154418,0,0.473554504088034,0,0.80642697289893,2.40696176205157,1.01377082717959,0,0,0,1.80719576192283,1.00267582127178,2.462390822334,0,1.45990461090791,0.0945348171640679,0.221729397462564,0.43917392846563,0.261958150995425,0,0,0.97364218096405,0.348259474598534,1.32957960518865,0.476981248610684,0,0,0.39752481473341,0,0,0,0,0.825354125820202,0.626984899610432,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0.732186172644509,0,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0,0.993943903390637,0.506522046658319,0.397227542439656,0.573673241497627,0.354668382198357,1.68203280042692,0,0.24666754841716,1.24484414159907,1.75123873690594,0.490385709340376,0,1.72852777344,0.234321431833797,0.312160076830321,0,0.448346041655403,0.117434498643765,0.485618833104395,0.280901613404497,0.61246251376468,0.982674538494144,1.85986406116378,1.18800285728205,2.71993622206413,0,0.718618141816238,0,1.50142223846357,0.277064115484183,1.31693286264251,0.919463387397059,1.95309476578576,0.567160915800105,0.179389635688862,0.213557388818567,0,0.300091096084402,0,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0.276149695926898,0.161646056818812,0.355009592516614,0.503760491138201,0.339121184620975,0,0.272746120590835,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0.464367928031979,0,0.236613600079688,0.337169380156203,0,0.220587945464788,0.653638332277218,0,0.269662616320329,0.392442930250692,0,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0.491953754172454,0,0.329250856225877,1.1240175325762,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0,0,0,0,0.468008530278475,0.297262324577456,0,0,0.567100388969546,0.626909658919938,0.581267877027924,0.383382679165211,22.1698457053175,1.32072651019839,5.1832028885193,5.47655822984453,2.27236380167484,0,0.381988425558278,0,0,0.102827492703324,0,0.285826432630578,0,1.30788020649984,0.36669142910475,0.129271715757778,0,0,0,0,0.257207374262142,0,0.799266537048298,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0.799783929456456,0,1.00451418286425,4.21667878966063,1.19812427745791,1.14861935834114,0,0.289562613335158,1.43833425785268,0.537182889719687,0.672510863961164,1.18218456121156,1.94064817373566,1.79680250791648,0,0,0,0,0,0,2.99161459204025,0.414415513436035,0.858840442033979,0.500170521059677,0.542530047399471,0.415941723061614,1.60586089917446,0.630809660135739,0.35142424497814,0,0,0,0,0.184369168541703,0.173767228936166,0.391602314925481,0,1.03384013061444,3.01999881146064,1.70764092485511,0,0,0,0.496215615637554,0.153461973288062,0.280660094433074,0.640695746278505,0.511707249066704,0.804269605718038,1.48418066444991,0.462629081407967,0.177561725313127,0.0821271560138091,0.519254429183621,0,0.604297247958111,1.80455823272956,1.47329582297434,0.803701137152247,1.82091168006717,0.786746489756545,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,1.00337954770971,0,0,0.223874754722178,0,0,0,0.328014645699706,0.325378394664303,0.824328093181778,0,0,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0.689182862422653,0.214840489736547,0.580066775656914,0.255679882248303,0.267096106940212,0.826424576804891,1.72971060628596,0.382838137483752,1.92199783625545,0.929691098594572,0,0,0.308033580176089,0,0,0.18532421910392,1.28812398067792,0,1.89827654831236,0.571890581771475,0,0,0,0,0,0.823611089208164,0.353437207037059,0.2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|phase1_expression=0.363356758541113,0.856402095563933,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0.331397375727916,0,0,0,0,0,0.204000691244253,0.626909442956176,0,0.273748850145768,0.125542639594803,0,0,0,1.96682138424452,1.91914699048606,1.70297735647684,0.919421224478927,0.30120591877825,0,0,0,0.293600439334847,3.32397245119126,9.42558903109666,8.24641308720237,0.447830948479849,0.32389366601898,0.77272670290256,2.76256653681173,2.26725566213286,4.12392904019288,3.71886459049095,6.57868620834921,4.95530193432166,2.8769239232215,2.56160706529101,2.12834006899727,5.17118521104928,3.87290810150296,1.35426486594342,2.44715041405386,2.45615535052061,2.9214052977861,3.06083892370903,2.24650318953266,2.55734850319616,2.96866170168044,3.59034583718937,2.55734850319616,8.9964863974861,6.24123747160254,10.5879782329248,2.51248665256743,5.73631210262222,2.82345498116652,4.84319602106695,6.62899744777616,3.79754864929061,0.422510572623884,0.850417199860174,0.209658645508376,0.786300418025466,0.300353785683013,1.28580469357664,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,2.34894875748376,1.14681968437569,0,1.12101712596307,0.526768169550154,0.786839080455332,6.28817220398664,2.2616164889946,0.334372990781356,0.651844533267181,0,0,0.668462741311041,0.883817722424512,0.664601683750863,0,0.512365278902701,0.390178042679635,0.328875809207352,0.552700035571697,0.289803085735052,0.14828656316206,0,0,0.226618685395132,0,0,0.506039384039006,0.637130828648193,0,0,0,0.127986611154418,0,0.473554504088034,0,0.80642697289893,2.40696176205157,1.01377082717959,0,0,0,1.80719576192283,1.00267582127178,2.462390822334,0,1.45990461090791,0.0945348171640679,0.221729397462564,0.43917392846563,0.261958150995425,0,0,0.97364218096405,0.348259474598534,1.32957960518865,0.476981248610684,0,0,0.39752481473341,0,0,0,0,0.825354125820202,0.626984899610432,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0.732186172644509,0,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0,0.993943903390637,0.506522046658319,0.397227542439656,0.573673241497627,0.354668382198357,1.68203280042692,0,0.24666754841716,1.24484414159907,1.75123873690594,0.490385709340376,0,1.72852777344,0.234321431833797,0.312160076830321,0,0.448346041655403,0.117434498643765,0.485618833104395,0.280901613404497,0.61246251376468,0.982674538494144,1.85986406116378,1.18800285728205,2.71993622206413,0,0.718618141816238,0,1.50142223846357,0.277064115484183,1.31693286264251,0.919463387397059,1.95309476578576,0.567160915800105,0.179389635688862,0.213557388818567,0,0.300091096084402,0,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0.276149695926898,0.161646056818812,0.355009592516614,0.503760491138201,0.339121184620975,0,0.272746120590835,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0.464367928031979,0,0.236613600079688,0.337169380156203,0,0.220587945464788,0.653638332277218,0,0.269662616320329,0.392442930250692,0,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0.491953754172454,0,0.329250856225877,1.1240175325762,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0,0,0,0,0.468008530278475,0.297262324577456,0,0,0.567100388969546,0.626909658919938,0.581267877027924,0.383382679165211,22.1698457053175,1.32072651019839,5.1832028885193,5.47655822984453,2.27236380167484,0,0.381988425558278,0,0,0.102827492703324,0,0.285826432630578,0,1.30788020649984,0.36669142910475,0.129271715757778,0,0,0,0,0.257207374262142,0,0.799266537048298,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0.799783929456456,0,1.00451418286425,4.21667878966063,1.19812427745791,1.14861935834114,0,0.289562613335158,1.43833425785268,0.537182889719687,0.672510863961164,1.18218456121156,1.94064817373566,1.79680250791648,0,0,0,0,0,0,2.99161459204025,0.414415513436035,0.858840442033979,0.500170521059677,0.542530047399471,0.415941723061614,1.60586089917446,0.630809660135739,0.35142424497814,0,0,0,0,0.184369168541703,0.173767228936166,0.391602314925481,0,1.03384013061444,3.01999881146064,1.70764092485511,0,0,0,0.496215615637554,0.153461973288062,0.280660094433074,0.640695746278505,0.511707249066704,0.804269605718038,1.48418066444991,0.462629081407967,0.177561725313127,0.0821271560138091,0.519254429183621,0,0.604297247958111,1.80455823272956,1.47329582297434,0.803701137152247,1.82091168006717,0.786746489756545,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,1.00337954770971,0,0,0.223874754722178,0,0,0,0.328014645699706,0.325378394664303,0.824328093181778,0,0,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0.689182862422653,0.214840489736547,0.580066775656914,0.255679882248303,0.267096106940212,0.826424576804891,1.72971060628596,0.382838137483752,1.92199783625545,0.929691098594572,0,0,0.308033580176089,0,0,0.18532421910392,1.28812398067792,0,1.89827654831236,0.571890581771475,0,0,0,0,0,0.823611089208164,0.353437207037059,0.2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| ||
|short_description=p1@AB384754 | |||
}} | }} |
Latest revision as of 08:11, 31 July 2015
Short description: | p1@AB384754 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AB384754_5end |
Coexpression cluster: | C4670_CD14_Mast_Basophils_placenta_Fibroblast_transitionalcell_Chondrocyte |
Association with transcript: | -10bp_to_AB384754_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.64e-41 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.64e-41 | 42 |
granulocyte monocyte progenitor cell | 3.42e-40 | 67 |
defensive cell | 1.09e-38 | 48 |
phagocyte | 1.09e-38 | 48 |
myeloid leukocyte | 2.76e-38 | 72 |
myeloid lineage restricted progenitor cell | 5.34e-35 | 66 |
macrophage dendritic cell progenitor | 1.25e-32 | 61 |
monopoietic cell | 4.27e-30 | 59 |
monocyte | 4.27e-30 | 59 |
monoblast | 4.27e-30 | 59 |
promonocyte | 4.27e-30 | 59 |
leukocyte | 4.94e-30 | 136 |
hematopoietic lineage restricted progenitor cell | 7.61e-26 | 120 |
myeloid cell | 2.14e-25 | 108 |
common myeloid progenitor | 2.14e-25 | 108 |
hematopoietic cell | 4.52e-22 | 177 |
nongranular leukocyte | 4.84e-22 | 115 |
hematopoietic stem cell | 1.27e-21 | 168 |
hematopoietic oligopotent progenitor cell | 1.96e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.96e-20 | 161 |
mesenchymal cell | 9.29e-16 | 354 |
connective tissue cell | 5.66e-15 | 361 |
motile cell | 3.05e-12 | 386 |
multi fate stem cell | 1.61e-11 | 427 |
somatic stem cell | 1.73e-11 | 433 |
stem cell | 2.72e-11 | 441 |
mast cell | 5.49e-09 | 5 |
basophil mast progenitor cell | 5.49e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.75e-35 | 76 |
bone element | 1.57e-33 | 82 |
skeletal system | 3.37e-30 | 100 |
hematopoietic system | 1.21e-29 | 98 |
blood island | 1.21e-29 | 98 |
skeletal element | 3.45e-29 | 90 |
immune system | 2.92e-26 | 93 |
hemolymphoid system | 2.00e-25 | 108 |
musculoskeletal system | 3.02e-18 | 167 |
connective tissue | 1.04e-15 | 371 |
lateral plate mesoderm | 2.08e-12 | 203 |
mesoderm | 8.00e-07 | 315 |
mesoderm-derived structure | 8.00e-07 | 315 |
presumptive mesoderm | 8.00e-07 | 315 |