FFCP PHASE1:Hg19::chr7:20370694..20370705,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:20370694..20370705,+
|short_description=p15@ITGB8
|description=CAGE_peak_15_at_ITGB8_5end
|association_with_transcript=-19bp_to_ENST00000478974,NM_002214,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3696 | |EntrezGene=3696 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6163 | |HGNC=6163 | ||
|TSSclassifier=strong | |||
|UniProt=P26012,Q9BUG9 | |UniProt=P26012,Q9BUG9 | ||
|association_with_transcript=-19bp_to_ENST00000478974,NM_002214,uc003sut.2,uc003suu.2_5end | |||
|cluster_id=chr7:20370694..20370705,+ | |||
|coexpression_cluster_id=C1537 | |||
|description=CAGE_peak_15_at_ITGB8_5end | |||
|id=chr7:20370694..20370705,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002623;6.66e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,4.58e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.98e-08;3!UBERON:0003057;1.98e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.66e-21!82;UBERON:0005743!2.07e-20!86;UBERON:0001049!4.27e-20!57;UBERON:0005068!4.27e-20!57;UBERON:0006241!4.27e-20!57;UBERON:0007135!4.27e-20!57;UBERON:0000153!1.17e-18!129;UBERON:0007811!1.17e-18!129;UBERON:0000033!1.44e-18!123;UBERON:0000955!6.90e-18!69;UBERON:0006238!6.90e-18!69;UBERON:0000073!8.26e-18!94;UBERON:0001016!8.26e-18!94;UBERON:0002616!5.88e-17!59;UBERON:0003075!9.36e-17!86;UBERON:0007284!9.36e-17!86;UBERON:0002346!1.60e-16!90;UBERON:0007023!3.93e-16!115;UBERON:0000924!2.14e-15!173;UBERON:0006601!2.14e-15!173;UBERON:0004121!2.26e-15!169;UBERON:0003080!1.67e-13!42;UBERON:0002780!5.11e-13!41;UBERON:0001890!5.11e-13!41;UBERON:0006240!5.11e-13!41;UBERON:0000062!7.81e-13!511;UBERON:0000477!1.61e-12!286;UBERON:0002020!4.02e-12!34;UBERON:0003528!4.02e-12!34;UBERON:0001893!7.35e-12!34;UBERON:0002791!2.09e-11!33;UBERON:0003056!6.36e-11!61;UBERON:0000467!7.97e-11!625;UBERON:0001869!9.96e-11!32;UBERON:0000480!1.10e-10!626;UBERON:0004111!1.84e-10!241;UBERON:0000922!4.49e-10!612;UBERON:0002050!4.83e-10!605;UBERON:0005423!4.83e-10!605;UBERON:0000468!9.96e-10!659;UBERON:0000923!1.00e-09!604;UBERON:0005291!1.00e-09!604;UBERON:0006598!1.00e-09!604;UBERON:0002532!1.00e-09!604;UBERON:0000956!2.71e-08!25;UBERON:0000203!2.71e-08!25;UBERON:0000481!4.66e-08!347;UBERON:0003076!4.84e-08!15;UBERON:0003057!4.84e-08!15;UBERON:0000025!7.82e-08!194;UBERON:0000064!2.16e-07!219;UBERON:0001950!4.89e-07!20;UBERON:0002619!5.77e-07!22;UBERON:0000475!5.82e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;5.81e-09;3!UBERON:0005290;5.81e-09;3!UBERON:0006947;8.26e-09;3!UBERON:0004054;8.26e-09;3!UBERON:0002240;1.98e-08;3!UBERON:0005174;1.98e-08;3!UBERON:0001137;1.98e-08;3!UBERON:0002298;1.03e-07;6!UBERON:0000489;5.42e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,3.65e-10,15;UBERON:0003057,3.65e-10,15;UBERON:0000489,1.91e-09,31;UBERON:0001896,4.22e-09,3;UBERON:0005290,4.22e-09,3;UBERON:0010096,4.22e-09,3;UBERON:0007023,7.84e-09,114;UBERON:0006947,7.87e-09,3;UBERON:0004054,7.87e-09,3;UBERON:0002240,3.26e-08,3;UBERON:0005174,3.26e-08,3;UBERON:0001137,3.26e-08,3;UBERON:0002298,8.01e-08,6;UBERON:0001017,8.70e-08,81;UBERON:0001049,5.28e-07,56;UBERON:0005068,5.28e-07,56;UBERON:0006241,5.28e-07,56;UBERON:0007135,5.28e-07,56 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0.662794751455832,0,0,1.46062018077475,0,0.123121058076788,0.408001382488506,0.940364164434263,1.14494394852423,0.821246550437305,0.376627918784408,0.0764134057479513,0.246301768349837,0.550975469195755,0.393364276848904,0,0,0,0,0,0,0,0,3.32397245119126,2.20598892217156,1.51907609501096,0,0,0,0,0,0,0.697287110717054,0,0,0,0,0.236482229888585,1.03423704220986,0.645484683583826,0,0.188242339542605,0,0,0.306083892370903,0,1.27867425159808,0,0,0,3.48251086354301,1.70215567407342,3.11411124497787,0,0,0,1.21079900526674,2.20966581592539,1.58231193720442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0.486634870302636,1.98523116044542,0.665188192387692,0.790513071238134,0.523916301990851,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.25326102332916,4.36950296683622,2.86836620748814,0.709336764396714,0.560677600142307,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0.125118519871964,0,0,0.919463387397059,0.600952235626387,0,0,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0.860413786167011,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.354920400119532,0.168584690078102,0,0.441175890929576,0.435758888184812,0.71181185733329,0.269662616320329,0.588664395376038,0.769494313892781,0,0,0.4115740113314,0,0,0,0,0,0,0.686271241194102,0.219500570817251,0,0,0,0,0,0,0.579652024875384,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0.567100388969546,0.53735113621709,0,0,0,0,0,0.144119953416961,0,0.507983154337352,1.14596527667483,0,1.71072446022705,1.02827492703324,0.600686115687835,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,1.49959486773086,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77866236955724,1.30139853857622,0,0.335032530668698,0.637938751653163,0,0,0,0.24538298343828,0,0,0.415941723061614,0,0,0.585707074963566,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0.533637789017222,0,0,0,0,0.306923946576125,0.280660094433074,0.256278298511402,0,0,0,0,0,0,0.519254429183621,0,0,0.40101294060657,0.184161977871793,0.114814448164607,0,0,0.451199612907412,1.30926073077505,0,1.46139224653261,0.73886140225013,0,0,0,1.54227252690289,0.270946437543853,1.00337954770971,0.764628819135115,0,1.11937377361089,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0,0,0,0.192190067365106,0,0.2023155617111,0.464845549297286,0.94443704049192,0,0.308033580176089,0,0,0.55597265731176,0.143124886741991,0.372158369359667,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,1.94970791705028,0,0,0.707027159768564,0,0,0.66343897524122,1.75380354101505,0,0,0.608731130888112,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0.37428108081644,0,0,0,0,0.23874448473769,0,0,0.994147647766298,1.54736358051564,0.333926115068718,0.16480387422676,0,0,0,0.503865495708552,0.20453736500431,0.123084805461069,0,0.269605053441981,0,0,0.197286811273867,2.3948309234694,0,0.969332746095218,1.11321717794222,1.99613798001194,0.260427761085233,0,0.724999575434793,0.910347586283997,0.254253650292766,0,0,0,0.173624994933292,0,1.68835014075571,0,0.442317039724898,1.18219047581419,1.53569778007781,0.10893846351899,0,0.384751292518985,0.683652335082007,0,0,0,0.31900115973192,0.274792780205587,0,0,0.156980256395025,0,0,0,0,0,0,0,7.67194198347994,0,0,0,0.176915129006678,1.22206028986725,0.296521128680622,0,0.522109747527277,0.808813595768125,0,0.702793337176017,0,0.19566461893209,0,1.18375320854817,0,0.61214552326098,0.063186579628488,0,0,0,0.330991955875499,0,0,3.69992409838731,0,3.64475450503775,0.293977192243133,0.174118413160805,1.7472666824203,0.171986032471617,0.580537987734511,0.0730893170861856,0.164230914106418,0.387956065953678,0,1.80784592624426,0,0,0.189932387867636,0,0.0801588202515337,1.28071796843612,0.999048047910651,0.432271251462318,0,0,0,0,0.471388069233591,0.271808412147228,0.104602846312333,0,0.288950589901519,0.600420288709789,0.958337652243951,0,0.429765441419957,0,1.11712960508902,0.458320848023367,0,0.399358000997982,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0,0,0.295282444544246,0,0,0.953423842781029,0,0.137539436597234,0,0.449947783103001,0,0.607495566580247,0.670869375198532,1.57611414598396,0.83927341015997,0,0.179287339332845,0.575745591958336,0,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,2.45637617086946,0.79339561045614,0,1.40963004463334,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.610131324509816,0.3755727921195,4.0138643698305,1.77486482458964,1.24192805882767,0,0.37494122388632,0,1.141861334179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| ||
|short_description=p15@ITGB8 | |||
}} | }} |
Latest revision as of 16:36, 17 September 2015
Short description: | p15@ITGB8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_ITGB8_5end |
Coexpression cluster: | C1537_clear_endometrial_serous_Neural_Fibroblast_CD14_melanoma |
Association with transcript: | -19bp_to_ENST00000478974, NM_002214, uc003sut.2, uc003suu.2_5end |
EntrezGene: | ITGB8 |
HGNC: | 6163 |
UniProt: | P26012Q9BUG9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 4.58e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
posterior neural tube | 3.65e-10 | 15 |
chordal neural plate | 3.65e-10 | 15 |
cavitated compound organ | 1.91e-09 | 31 |
medulla oblongata | 4.22e-09 | 3 |
myelencephalon | 4.22e-09 | 3 |
future myelencephalon | 4.22e-09 | 3 |
adult organism | 7.84e-09 | 114 |
male genital duct | 7.87e-09 | 3 |
internal male genitalia | 7.87e-09 | 3 |
spinal cord | 3.26e-08 | 3 |
dorsal region element | 3.26e-08 | 3 |
dorsum | 3.26e-08 | 3 |
brainstem | 8.01e-08 | 6 |
central nervous system | 8.70e-08 | 81 |
neural tube | 5.28e-07 | 56 |
neural rod | 5.28e-07 | 56 |
future spinal cord | 5.28e-07 | 56 |
neural keel | 5.28e-07 | 56 |