FFCP PHASE1:Hg19::chr10:3878103..3878116,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:3878103..3878116,- | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr10:3878103..3878116,- | |||
|id=chr10:3878103..3878116,- | |||
|ontology_enrichment_celltype=CL:0002057!8.31e-79!42;CL:0000860!8.10e-73!45;CL:0000738!7.20e-65!140;CL:0000557!3.88e-61!71;CL:0000766!8.83e-60!76;CL:0002009!3.27e-58!65;CL:0000839!5.40e-56!70;CL:0002194!5.01e-54!63;CL:0000576!5.01e-54!63;CL:0000040!5.01e-54!63;CL:0000559!5.01e-54!63;CL:0000037!1.67e-53!172;CL:0000566!1.67e-53!172;CL:0000988!2.02e-51!182;CL:0002031!1.84e-50!124;CL:0002087!5.44e-49!119;CL:0000763!1.42e-46!112;CL:0000049!1.42e-46!112;CL:0002032!1.14e-44!165;CL:0000837!1.14e-44!165;CL:0002393!3.70e-24!9;CL:0002397!3.70e-24!9;CL:0000134!6.30e-22!358;CL:0002320!3.47e-21!365;CL:0000219!1.42e-18!390;CL:0000048!5.29e-17!430;CL:0000034!8.39e-17!444;CL:0000723!1.55e-16!436;CL:0000451!2.12e-10!10;CL:0000767!1.45e-09!3;CL:0002371!2.08e-09!591;CL:0000842!4.09e-09!3;CL:0000875!9.58e-09!3;CL:0002396!9.58e-09!3;CL:0000144!1.35e-08!625;CL:0000784!1.74e-08!3;CL:0000623!2.09e-08!3;CL:0000825!2.09e-08!3;CL:0000063!2.43e-08!578;CL:0000453!3.84e-08!5;CL:0000080!2.69e-07!6;CL:0000224!6.56e-07!4;CL:0000990!7.89e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.53e-41;33!CL:0002057;2.53e-41;33!CL:0000576;2.63e-35;48!CL:0000473;4.28e-32;39!CL:0000234;4.28e-32;39!CL:0000766;7.34e-29;69!CL:0002393;5.62e-28;6!CL:0002397;5.62e-28;6!CL:0002087;1.26e-15;104!CL:0000767;4.30e-15;3!CL:0000226;2.91e-14;3!CL:0000842;2.91e-14;3!CL:0000763;2.13e-12;100!CL:0000738;1.06e-09;136!CL:0001014;1.33e-09;2!CL:0001016;1.33e-09;2!CL:0000988;1.72e-07;177!CL:0000840;4.28e-07;5!CL:0000875;6.08e-07;3!CL:0002396;6.08e-07;3!CL:0000623;8.56e-07;3!CL:0000784;9.91e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.98e-73,42;CL:0002057,3.98e-73,42;CL:0000473,3.84e-68,48;CL:0000234,3.84e-68,48;CL:0002009,1.53e-63,61;CL:0000557,3.52e-61,67;CL:0000766,5.82e-61,72;CL:0002194,2.53e-57,59;CL:0000576,2.53e-57,59;CL:0000040,2.53e-57,59;CL:0000559,2.53e-57,59;CL:0000839,2.75e-54,66;CL:0000738,2.58e-50,136;CL:0000763,1.04e-43,108;CL:0000049,1.04e-43,108;CL:0002087,1.89e-40,115;CL:0000037,3.11e-39,168;CL:0002031,3.33e-38,120;CL:0000988,7.82e-37,177;CL:0002032,1.27e-32,161;CL:0000837,1.27e-32,161;CL:0002393,5.06e-32,9;CL:0002397,5.06e-32,9;CL:0000134,2.69e-15,354;CL:0000767,4.31e-15,3;CL:0002320,7.77e-15,361;CL:0000226,2.48e-14,3;CL:0000842,2.48e-14,3;CL:0000219,3.29e-13,386;CL:0000034,1.82e-11,441;CL:0000048,3.23e-11,427;CL:0000723,6.09e-11,433;CL:0001014,1.14e-09,2;CL:0001016,1.14e-09,2;CL:0000840,4.02e-07,5;CL:0001029,4.02e-07,5;CL:0000875,5.99e-07,3;CL:0002396,5.99e-07,3;CL:0000623,7.83e-07,3;CL:0000825,7.83e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.85e-52;42!CL:0000049;1.15e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.57e-55!80;UBERON:0001474!8.01e-51!86;UBERON:0002390!4.62e-50!102;UBERON:0003061!4.62e-50!102;UBERON:0002193!1.96e-44!112;UBERON:0004765!1.74e-41!101;UBERON:0001434!1.74e-41!101;UBERON:0002405!5.81e-35!115;UBERON:0002204!1.20e-22!167;UBERON:0002384!3.56e-20!375;UBERON:0003081!7.65e-20!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.45e-53,76;UBERON:0001474,8.01e-49,82;UBERON:0002390,1.25e-48,98;UBERON:0003061,1.25e-48,98;UBERON:0004765,6.75e-44,90;UBERON:0002193,1.81e-43,108;UBERON:0002405,2.89e-42,93;UBERON:0001434,7.76e-39,100;UBERON:0003081,4.58e-21,203;UBERON:0002204,1.81e-20,167;UBERON:0002384,3.31e-14,371;UBERON:0000926,7.79e-11,315;UBERON:0004120,7.79e-11,315;UBERON:0006603,7.79e-11,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,14.9478425202584,18.039981710569,19.1971992911934,0,0,0,0,0,0.293600439334847,85.869288322441,40.1088894940283,75.0857612676847,0,0,0,0.145398238779565,0,0.485168122375632,1.39457422143411,0.411167888021826,2.16794459626573,2.8769239232215,0.768482119587302,5.67557351732605,16.8925383560943,10.973239620925,9.47985406160392,0,0.545812300115692,1.34834090667051,25.4049630667849,17.6510964891852,40.2782389253396,0.329851300186716,0.199463657621632,0,9.57690487474327,5.10646702222026,6.22822248995575,0,0,1.08594422352558,1.21079900526674,4.05105399586321,25.3169909952708,2.11255286311942,5.31510749912609,7.33805259279316,0.22465726229299,0.600707571366025,1.28580469357664,3.42015292489498,0.79566670879636,4.20127553658658,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,1.14681968437569,0,4.48406850385229,0,0.196709770113833,0.393010762749165,0.616804496998528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451725357233318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10037811596945,1.14398982156026,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,0.864719720501769,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0,0,0,0,0,0,0,0,0,2.56139988262505,0.215627574859517,2.82354679815446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,13.1585662499356,8.85838729768588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18785872333055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.249738915515,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0.612691153526923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:3878103..3878116,- | |||
}} |
Latest revision as of 13:36, 23 July 2015
Short description: | p@chr10:3878103..3878116, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:3878103..3878116, - |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.45e-53 | 76 |
bone element | 8.01e-49 | 82 |
hematopoietic system | 1.25e-48 | 98 |
blood island | 1.25e-48 | 98 |
skeletal element | 6.75e-44 | 90 |
hemolymphoid system | 1.81e-43 | 108 |
immune system | 2.89e-42 | 93 |
skeletal system | 7.76e-39 | 100 |
lateral plate mesoderm | 4.58e-21 | 203 |
musculoskeletal system | 1.81e-20 | 167 |
connective tissue | 3.31e-14 | 371 |
mesoderm | 7.79e-11 | 315 |
mesoderm-derived structure | 7.79e-11 | 315 |
presumptive mesoderm | 7.79e-11 | 315 |