FFCP PHASE1:Hg19::chr10:60272743..60272754,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80114 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19351 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H694 | |||
|association_with_transcript=-145bp_to_ENST00000373886_5end | |||
|cluster_id=chr10:60272743..60272754,+ | |||
|coexpression_cluster_id=C3029 | |||
|description=CAGE_peak_4_at_BICC1_5end | |||
|id=chr10:60272743..60272754,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.35e-30!180;CL:0000057!8.03e-19!75;CL:0000680!1.25e-14!57;CL:0000056!1.25e-14!57;CL:0000355!1.25e-14!57;CL:0000183!3.40e-14!59;CL:0000187!5.55e-14!54;CL:0000192!8.06e-11!42;CL:0000514!8.06e-11!42;CL:0000393!9.20e-11!60;CL:0000211!9.20e-11!60;CL:0000359!4.33e-10!32;CL:0000499!3.03e-07!27;CL:0002494!5.04e-07!16;CL:1000507!5.25e-07!12;CL:1000494!5.25e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.05e-09;10!CL:1000494;1.05e-09;10!CL:0002334;2.53e-09;12!CL:0000359;2.95e-09;32!CL:0000499;7.01e-09;28!CL:1000497;1.88e-08;17!CL:0002518;1.88e-08;17!CL:0000192;5.79e-08;43!CL:0000187;1.50e-07;55!CL:0002494;1.51e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.61e-16,76;CL:0000187,4.88e-13,55;CL:0000680,1.17e-12,58;CL:0000056,1.17e-12,58;CL:0000355,1.17e-12,58;CL:0000393,9.66e-11,61;CL:0000211,9.66e-11,61;CL:0000192,4.31e-10,43;CL:0000514,4.31e-10,43;CL:1000507,1.25e-09,10;CL:1000494,1.25e-09,10;CL:0002334,1.39e-09,12;CL:0000359,1.55e-09,32;CL:0000499,4.27e-09,28;CL:1000497,1.51e-08,17;CL:0002518,1.51e-08,17;CL:0000048,2.05e-08,427;CL:0000723,6.98e-08,433;CL:0002494,1.95e-07,16;CL:0000034,3.29e-07,441;CL:1000449,8.88e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;5.79e-08;43 | |||
|ontology_enrichment_disease=DOID:2394!7.87e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.58e-16!143;UBERON:0001134!8.53e-15!61;UBERON:0002036!8.53e-15!61;UBERON:0003082!8.53e-15!61;UBERON:0000486!1.37e-14!82;UBERON:0002100!1.96e-14!216;UBERON:0003104!3.03e-14!238;UBERON:0009142!3.03e-14!238;UBERON:0002385!3.29e-14!63;UBERON:0001015!3.29e-14!63;UBERON:0000383!3.29e-14!63;UBERON:0004290!4.98e-14!70;UBERON:0000914!1.37e-13!83;UBERON:0002329!1.37e-13!83;UBERON:0003077!1.37e-13!83;UBERON:0003059!1.37e-13!83;UBERON:0007282!1.37e-13!83;UBERON:0009618!1.37e-13!83;UBERON:0007285!1.37e-13!83;UBERON:0000475!1.46e-13!365;UBERON:0000481!3.02e-13!347;UBERON:0003103!1.33e-09!69;UBERON:0003914!3.14e-09!118;UBERON:0000119!1.61e-08!312;UBERON:0003102!2.11e-08!95;UBERON:0000483!6.95e-08!309;UBERON:0001008!9.24e-08!45;UBERON:0000468!1.03e-07!659;UBERON:0006554!1.35e-07!44;UBERON:0004573!3.07e-07!33;UBERON:0004571!3.07e-07!33;UBERON:0000490!3.53e-07!138;UBERON:0000948!3.68e-07!24;UBERON:0005498!3.68e-07!24;UBERON:0004140!3.68e-07!24;UBERON:0009881!3.68e-07!24;UBERON:0004141!3.68e-07!24;UBERON:0003084!3.68e-07!24;UBERON:0007005!3.68e-07!24;UBERON:0004139!3.68e-07!24;UBERON:0004291!3.68e-07!24;UBERON:0009773!5.25e-07!12;UBERON:0001231!5.25e-07!12;UBERON:0004810!5.25e-07!12;UBERON:0007100!7.42e-07!27;UBERON:0000926!9.64e-07!448;UBERON:0004120!9.64e-07!448;UBERON:0006603!9.64e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.05e-09;10!UBERON:0009773;1.05e-09;10!UBERON:0001231;1.05e-09;10!UBERON:0004810;1.05e-09;10!UBERON:0004573;2.74e-07;33!UBERON:0004571;2.74e-07;33!UBERON:0002113;2.91e-07;24!UBERON:0011143;2.91e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,7.43e-13,160;UBERON:0009142,7.43e-13,160;UBERON:0001134,9.69e-13,62;UBERON:0002036,9.69e-13,62;UBERON:0003082,9.69e-13,62;UBERON:0002385,5.39e-12,64;UBERON:0001015,5.39e-12,64;UBERON:0000383,5.39e-12,64;UBERON:0007503,5.86e-12,78;UBERON:0002329,2.44e-11,71;UBERON:0003059,2.44e-11,71;UBERON:0007282,2.44e-11,71;UBERON:0004290,2.44e-11,71;UBERON:0009618,2.44e-11,71;UBERON:0000486,3.31e-11,83;UBERON:0003077,5.03e-11,72;UBERON:0007285,5.03e-11,72;UBERON:0007524,1.01e-10,73;UBERON:0002100,1.99e-10,199;UBERON:0004810,1.25e-09,10;UBERON:0005256,4.81e-09,122;UBERON:0003914,1.02e-08,117;UBERON:0004573,4.20e-08,33;UBERON:0004571,4.20e-08,33;UBERON:0003103,4.69e-08,68;UBERON:0002113,1.95e-07,26;UBERON:0003918,1.95e-07,26;UBERON:0011143,1.95e-07,26;UBERON:0005095,1.95e-07,26;UBERON:0007687,1.95e-07,26;UBERON:0006555,2.21e-07,16;UBERON:0004819,2.21e-07,16;UBERON:0004211,8.88e-07,15;UBERON:0009773,8.88e-07,15;UBERON:0001231,8.88e-07,15;UBERON:0001285,8.88e-07,15;UBERON:0007684,8.88e-07,15;UBERON:0004208,8.88e-07,15;UBERON:0001637,9.46e-07,42;UBERON:0003509,9.46e-07,42;UBERON:0004572,9.46e-07,42 | |||
|phase1_expression=1.09007027562334,0.642301571672949,1.69145284915165,0,0.446961094427288,2.61701557230111,0,0,0.522371256399677,0,0,0,0,0.618831764800233,0,1.34465029290355,1.20538905604795,1.46062018077475,0.975865597581014,0.984968464614303,0.612002073732759,0.313454721478088,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0.710846162437108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,1.79007586580942,3.61439152384566,2.50668955317945,2.462390822334,2.3858578411533,2.91980922181582,0.189069634328136,0,1.14185221401064,1.17881167947941,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,2.98183171017191,2.02608818663328,7.28250494472703,6.3104056564739,0.709336764396714,3.92474320099615,1.06748995729705,0.49333509683432,9.33633106199299,1.0776853765575,0.980771418680752,1.51357427644931,4.03323147135999,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0.647491777472526,0,1.02077085627447,0.368502951935304,1.44656093646072,4.75201142912821,4.20353779773547,0,0.718618141816238,0.841680569770331,0.125118519871964,0.831192346452549,1.31693286264251,3.67785354958824,4.5071417671979,0.567160915800105,0.717558542755448,2.13557388818567,1.69545520927649,2.40072876867522,2.16410311400722,1.54584324027377,0.744467425326359,1.0126579934476,2.14361411354637,2.01947019395292,3.31379635112278,2.42469085228218,1.06502877754984,0.201504196455281,0.67824236924195,0.386521706326594,0,1.43402297694502,0.121973706129595,0,0,0,0,0,1.56449532329816,1.92972281457866,0,1.85747171212792,3.60939740834793,0.354920400119532,0.674338760312407,0.241011029883482,0.220587945464788,1.30727666455444,0.71181185733329,0.943819157121151,0.196221465125346,0.38474715694639,0,0,0.8231480226628,0,0,0,0,0,1.96781501668982,0.686271241194102,0,0,0.201057944823262,0,1.3032332212413,0,0,0.115930404975077,3.05262605013136,0,0,0,0,0,0,0,0,0,0,0,0.358234090811393,0,0.383382679165211,0,0,0,0,0.12624243342638,0.126995788584338,0,0,1.71072446022705,0,0,0,1.00917975910825,3.48768055066624,1.1734125731352,0.646358578788889,0,0,0.531876233169741,1.04007436911366,0.257207374262142,0,0.266422179016099,1.00084595560703,0,0.823240336780769,0,0,0.791951872933429,0.301439377059586,1.74306691720059,0.899756920638513,0,0,0,0.479249710983165,1.14861935834114,0,0.723906533337896,1.2328579353023,0.537182889719687,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,1.96306386750624,1.50051156317903,0.271265023699736,1.45579603071565,1.78428988797162,2.20783381047509,3.5142424497814,4.8151375956435,0,0,3.32112799267718,0.368738337083406,1.82455590382974,0,0.686286847621712,0,0,0,0,0,0,2.23297027036899,5.21770709179412,3.36792113319688,3.20347873139252,2.55853624533352,1.60853921143608,0,1.69630663182921,2.66342587969691,2.29956036838666,1.55776328755086,1.16210378459959,1.32945394550784,1.00253235151642,0,1.37777337797528,1.63882051206045,2.62248829918848,2.25599806453706,5.46808893441345,3.13739907670742,4.38417673959782,8.2330270536443,0,0,1.72732732881711,0,3.52230368807009,6.52196706011309,2.03901018436031,0.831076008928724,2.91037181138832,0,0,0,0,0,0.412164046590889,0.366277859273374,0.41254749960294,1.14853107599234,0,1.6068392984416,0.48335359146061,0.616194468458578,0.307007349452259,1.10269257987624,2.68550612170684,2.32026710262766,1.53407929348982,1.86967274858148,0.165284915360978,0.192190067365106,1.40373983744043,0,1.39453664789186,2.51849877464512,2.0911118104818,0.924100740528266,1.59691809095107,3.47973196830029,1.48259375283136,1.43124886741991,3.34942532423701,4.11293252134344,0.953150969619124,0,1.28381696410176,1.59101623962968,1.56989728039846,1.07923474549989,1.37268514868027,1.17812402345686,2.22400729730648,0,2.10629228119491,0,0.731140468893853,1.05650146756755,1.22849920267187,1.69686518344455,3.39024349860728,1.10273068709225,1.32687795048244,1.75380354101505,0.578775534266688,0.655894752046633,0.608731130888112,0,1.40847801266121,0,0.196498082026242,0.7133421029625,0.354761064070598,4.85547561184627,4.61012850143863,0.379473173765715,0,0,0,0,0.564862804660675,0.43050537267123,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,1.70481688083848,0,0,0,0,0,1.66963057534359,0,0,0.796991953004279,0.276283915531148,0,3.1703291575668,0,0.622079175323615,1.43789361835723,0.358042349351218,0,0.295930216910801,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.438770794307945,0,0,0.461701551022782,2.16489906109302,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,2.10998064528027,5.22344986109273,2.40300221437699,0,0,0.0884575645033392,0.611030144933625,0.296521128680622,0,0,0.134802265961354,0,0.234264445725339,0,0,0,1.18375320854817,0,0,3.22251556105289,0.150323419414493,0.311064574191741,0,0.661983911750998,0.627865836814451,0,9.67672456501295,0,0,0,0.261177619741208,1.57254001417827,0,0,0.0730893170861856,0.0821154570532092,0.581934098930517,0,0.225980740780532,0.274083849293502,0.397429223405979,0.126621591911757,0.195551382734803,0,1.06726497369676,0,0,0,0.343189995723929,0,0.124252535565433,0,0,0,1.22397861163586,0.288950589901519,0,0.136905378891993,0,1.71906176567983,0,0.837847203816763,1.14580212005842,0,0.199679000498991,0,1.33902874465124,0.739018197353989,0,0,0.236349546921671,0.412079291905832,0.539228350833479,0.78741985211799,0,0,0,0,0,0,0,0,0.0607495566580247,0,3.94028536495991,4.51109457960984,0,0,0.383830394638891,0.714695326373367,0,0,0,0,0.326587360109409,1.19730191562487,0,0.340776043570843,0.79318464064088,0.439656701034247,0,0,0,2.56630256826494,0,0.427149650270779,1.10043013569766,0.414239055347196,0,0,0,0,1.08803560673895,0,0,0,0,0.886068179966986,0,0,0,0.110929051536852,0.0620964029413835,1.10678907948985,0,0.151649117541648,0,0,0,0.144921028610825,4.17913448083247,1.63599316893057,1.66441758450784,1.32582103692562,5.53449383855665,2.66943366478961,0.457680136793847,2.26846385644859,2.33155800874171,2.66139269981341,2.70804504178294,0.899606224327209,2.17368139626763,1.65882483136342,0.797525143673985,0.521745061811734,1.05180326298053,3.04644169735036,1.22061219961398,2.18218391043071,1.28892668450986,1.39210127963548,0.796191777397232,0,2.06037423109676,2.35724642136143,1.26184898228651,0.192619830407303,0,0,0.906823702049089,0.463044948647668,0.244736704506468,0,0,0,0.176689145945881,0,0,6.40603796469867,0,0.607719912354764,0,0,0,0.163565394255844,0,0,0,0.39997479170986,0.106691729694141,0,2.27006381426734,1.10463570151104,0,0,0,0.323474434190045,0,0,0,0,0,0,0.318004350653419,0,0,0,2.1437183414724,0,0,0,0,0,0.345786262321089,0.161475645631851,0,0,0,0.183428598521679,0.115525666150338,0.381382095467167,2.0710797781803,0.596748666348824,1.27857558193737,0.40341013740704,0.781514011233092,0,0.655087670040387,0,0.135075169236789,0,0,0.253663240775627,0,0,0.496211178389294,0,0,0,0.336283722218824,0,0.682986574053893,0.0887023701626388,0,1.20041606606193,0,0.0657727735628491,0.118193840883968,0.222462803784138,0.863424021355654,0,0,1.82631744101899,5.61411737168416,2.38875843943525,1.85839014859306,0.158013611732727,0,1.04314963381548,12.827381835684,0.207216164163037,0.3414369541879,0.691259661814092,0,0.591660003652827,0.426067023795788,0,0.68732060563215,0.31020638566432,0,4.80978356730507,0,0,1.29485767437579,0.513314034281235,1.1598144313382,0.485710993059139,0.233939463462106,0,0,0,0,0.150962843566674,0,0.437119121007915,0,0.245148321753905,0,0,0,1.6906229103336,1.35941691750254,0,0.580120991762195,0,0,0,0,1.46067277649303,0,0,0,0.203974470572744,0,0.5290268405154,3.71995018166751,3.23522940041993,2.59575937274273,0,0,0,0,0,0,0,0.833565680400634,0,0,0,0.639701945702943,1.1903221573187,0.0645889098360061,0,0,0.318235791390825,0,0,1.02669990325584,0.471464371102113,0.78894425931944,0.99798106963804,0.162806537221949,0.213454691755431,3.8614456457388,2.15580485055809,0,0.611207220914332,0,0.665756774185513,0.402547587182052,0 | |||
|short_description=p4@BICC1 | |||
}} |
Latest revision as of 14:47, 18 September 2015
Short description: | p4@BICC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_BICC1_5end |
Coexpression cluster: | C3029_Cardiac_tridermal_sacrococcigeal_mesothelioma_endometrial_tenocyte_Fibroblast |
Association with transcript: | -145bp_to_ENST00000373886_5end |
EntrezGene: | BICC1 |
HGNC: | 19351 |
UniProt: | Q9H694 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.61e-16 | 76 |
muscle cell | 4.88e-13 | 55 |
muscle precursor cell | 1.17e-12 | 58 |
myoblast | 1.17e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.17e-12 | 58 |
electrically responsive cell | 9.66e-11 | 61 |
electrically active cell | 9.66e-11 | 61 |
smooth muscle cell | 4.31e-10 | 43 |
smooth muscle myoblast | 4.31e-10 | 43 |
kidney tubule cell | 1.25e-09 | 10 |
nephron tubule epithelial cell | 1.25e-09 | 10 |
preadipocyte | 1.39e-09 | 12 |
vascular associated smooth muscle cell | 1.55e-09 | 32 |
stromal cell | 4.27e-09 | 28 |
kidney cell | 1.51e-08 | 17 |
kidney epithelial cell | 1.51e-08 | 17 |
multi fate stem cell | 2.05e-08 | 427 |
somatic stem cell | 6.98e-08 | 433 |
cardiocyte | 1.95e-07 | 16 |
stem cell | 3.29e-07 | 441 |
epithelial cell of nephron | 8.88e-07 | 15 |