FFCP PHASE1:Hg19::chr10:70847334..70847349,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5552 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9361 | |||
|TSSclassifier=strong | |||
|UniProt=P10124 | |||
|association_with_transcript=-478bp_to_NM_002727,NR_036430,uc001joz.2_5end | |||
|cluster_id=chr10:70847334..70847349,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_9_at_SRGN_5end | |||
|id=chr10:70847334..70847349,+ | |||
|ontology_enrichment_celltype=CL:0000037!7.08e-69!172;CL:0000566!7.08e-69!172;CL:0000766!3.68e-68!76;CL:0000763!2.89e-67!112;CL:0000049!2.89e-67!112;CL:0002032!8.74e-67!165;CL:0000837!8.74e-67!165;CL:0000988!1.41e-64!182;CL:0000738!1.94e-62!140;CL:0000839!6.26e-58!70;CL:0000557!1.75e-56!71;CL:0002031!1.00e-53!124;CL:0002194!1.52e-52!63;CL:0000576!1.52e-52!63;CL:0000040!1.52e-52!63;CL:0000559!1.52e-52!63;CL:0002009!3.67e-52!65;CL:0002087!1.63e-50!119;CL:0002057!3.49e-45!42;CL:0000860!4.13e-41!45;CL:0000134!6.12e-21!358;CL:0002320!1.65e-20!365;CL:0000219!3.69e-16!390;CL:0000048!7.46e-12!430;CL:0000723!2.94e-11!436;CL:0000094!4.69e-11!8;CL:0000034!1.70e-10!444;CL:0000081!1.88e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.36e-86;33!CL:0002057;8.36e-86;33!CL:0000473;8.34e-72;39!CL:0000234;8.34e-72;39!CL:0000576;8.83e-50;48!CL:0000766;2.18e-40;69!CL:0000763;1.26e-22;100!CL:0000094;1.54e-16;8!CL:0002087;1.08e-13;104!CL:0000738;2.50e-13;136!CL:0000775;2.11e-12;3!CL:0000081;8.10e-12;11!CL:0000988;3.83e-09;177!CL:0000771;8.88e-09;2!CL:0000219;5.75e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.08e-104,72;CL:0002194,9.78e-92,59;CL:0000576,9.78e-92,59;CL:0000040,9.78e-92,59;CL:0000559,9.78e-92,59;CL:0002009,1.89e-88,61;CL:0000839,1.35e-85,66;CL:0000473,8.84e-85,48;CL:0000234,8.84e-85,48;CL:0000557,3.47e-84,67;CL:0000860,2.77e-82,42;CL:0002057,2.77e-82,42;CL:0000763,2.00e-69,108;CL:0000049,2.00e-69,108;CL:0000738,1.88e-55,136;CL:0002087,2.68e-47,115;CL:0002032,4.04e-45,161;CL:0000837,4.04e-45,161;CL:0002031,4.07e-45,120;CL:0000037,8.79e-45,168;CL:0000988,6.10e-42,177;CL:0000094,1.43e-16,8;CL:0000134,2.68e-15,354;CL:0002320,8.86e-15,361;CL:0000219,5.96e-13,386;CL:0000775,2.12e-12,3;CL:0000081,7.68e-12,11;CL:0000048,1.02e-10,427;CL:0000723,2.07e-10,433;CL:0000034,5.16e-10,441;CL:0000771,8.90e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002057;4.31e-61;42!CL:0000049;4.40e-20;108 | |||
|ontology_enrichment_disease=DOID:8692!3.73e-08!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.19e-60!102;UBERON:0003061!1.19e-60!102;UBERON:0002193!3.00e-54!112;UBERON:0002371!2.54e-49!80;UBERON:0001474!2.50e-44!86;UBERON:0004765!8.29e-36!101;UBERON:0001434!8.29e-36!101;UBERON:0002405!1.53e-34!115;UBERON:0002384!1.37e-19!375;UBERON:0003081!3.83e-19!216;UBERON:0002204!2.95e-14!167;UBERON:0000178!4.20e-09!15;UBERON:0000179!4.20e-09!15;UBERON:0000463!4.20e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.65e-10;15!UBERON:0000179;2.65e-10;15!UBERON:0000463;2.65e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.29e-80,98;UBERON:0003061,4.29e-80,98;UBERON:0002371,3.86e-73,76;UBERON:0002193,1.02e-71,108;UBERON:0001474,4.18e-67,82;UBERON:0002405,3.17e-61,93;UBERON:0004765,2.68e-60,90;UBERON:0001434,2.64e-53,100;UBERON:0003081,4.61e-33,203;UBERON:0002204,6.21e-28,167;UBERON:0000926,2.58e-17,315;UBERON:0004120,2.58e-17,315;UBERON:0006603,2.58e-17,315;UBERON:0002384,4.52e-14,371;UBERON:0000178,3.02e-10,15;UBERON:0000179,3.02e-10,15;UBERON:0000463,3.02e-10,15 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0.61130724598361,0.985207073399349,0.629686250509434,0.393364276848904,1.53531759238885,0.309632246632152,0,0,0,0,0,0.293600439334847,0.553995408531877,1.40381113229099,0.868043482863407,0.671746422719773,0.647787332037959,0.77272670290256,1.45398238779565,1.13362783106643,1.4555043671269,2.55671940596253,1.6446715520873,2.16794459626573,3.45230870786581,2.56160706529101,1.18241114944293,2.06847408441971,1.93645405075148,6.77132432971709,2.25890807451126,3.0019676506363,2.69668181334102,3.97909060082173,4.8139354061414,2.55734850319616,2.30895910130701,2.79249120670285,0.426224750532694,4.35313857942876,5.6738522469114,4.35975574296902,3.51748131359441,0.521482918420201,1.95469960234605,2.42159801053347,4.78760926783834,4.1140110367315,0,0.212604299965044,1.04829322754188,1.46027220490444,1.80212271409808,2.4108838004562,0,0.59675003159727,0.365328307529268,0,0.546138611262131,0,0.853460445133014,0,0,0.661044872784862,0,0.569212969109448,0,0,0,0,0,0,0.786021525498329,0,0.167186495390678,0.32592226663359,0,0,0.111410456885174,0,0,0.270803863765016,0,0.390178042679635,0,0,0,0.296573126324121,0,0,0.339928028092699,0,0.34362744548263,0.253019692019503,0,0,1.90090408889675,0.150575119077773,0.255973222308837,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,1.9472843619281,1.56716763569341,1.32957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,13.1780417436063,15.511210565933,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,0.702012795417713,0.148631162288728,0,0,0,0,0,0,6.40462209264727,0.968532774145487,0.621984346622316,0.720599767084807,0.37872730027914,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.50677127429638,0,0,0,0,0,0,0,0,0.394061520403854,0.431255149719035,0.385029108839245,0,0,0,0,0,17.9761685747324,14.9580729602012,17.8198670777495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.50999940573032,0.640365346820666,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0.784306353074702,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.05958087385735,0.764637207142375,1.70894156152249,2.62054953003568,5.34770955012053,1.29694662238543,1.08006287447623,0.79312517629427,0,0,0,0,0,0.142283686696828,0,0.199579371432817,0.5745161103971,0.211673582723883,0,0,0,0.313359791546046,0,0,0.481764225311099,0.605399121573143,0.851692475380653,0.687010689511529,2.45792611446766,1.78940886313933,2.50273712567863,0.781552381608161,0,0,0.540911356951966,0,1.4098700508785,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0.369254416383208,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0.470940769185074,0.498635045700469,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0.242780379534093,0.394584402849391,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0.446342914883745,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0.717149357331379,0,0.714695326373367,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0.790446527591777,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0.177404740325278,0.230467975111559,0,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0.297046400327086,0,0,0.187967835959707,0.128915775947154,3.49794045737251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0.829169439458779,0,0,0,0.129177819672012,0.31037357147929,0.112131862580613,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p9@SRGN | |||
}} |
Latest revision as of 00:14, 19 September 2015
Short description: | p9@SRGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SRGN_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -478bp_to_NM_002727, NR_036430, uc001joz.2_5end |
EntrezGene: | SRGN |
HGNC: | 9361 |
UniProt: | P10124 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.08e-104 | 72 |
monopoietic cell | 9.78e-92 | 59 |
monocyte | 9.78e-92 | 59 |
monoblast | 9.78e-92 | 59 |
promonocyte | 9.78e-92 | 59 |
macrophage dendritic cell progenitor | 1.89e-88 | 61 |
myeloid lineage restricted progenitor cell | 1.35e-85 | 66 |
defensive cell | 8.84e-85 | 48 |
phagocyte | 8.84e-85 | 48 |
granulocyte monocyte progenitor cell | 3.47e-84 | 67 |
classical monocyte | 2.77e-82 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.77e-82 | 42 |
myeloid cell | 2.00e-69 | 108 |
common myeloid progenitor | 2.00e-69 | 108 |
leukocyte | 1.88e-55 | 136 |
nongranular leukocyte | 2.68e-47 | 115 |
hematopoietic oligopotent progenitor cell | 4.04e-45 | 161 |
hematopoietic multipotent progenitor cell | 4.04e-45 | 161 |
hematopoietic lineage restricted progenitor cell | 4.07e-45 | 120 |
hematopoietic stem cell | 8.79e-45 | 168 |
hematopoietic cell | 6.10e-42 | 177 |
granulocyte | 1.43e-16 | 8 |
mesenchymal cell | 2.68e-15 | 354 |
connective tissue cell | 8.86e-15 | 361 |
motile cell | 5.96e-13 | 386 |
neutrophil | 2.12e-12 | 3 |
blood cell | 7.68e-12 | 11 |
multi fate stem cell | 1.02e-10 | 427 |
somatic stem cell | 2.07e-10 | 433 |
stem cell | 5.16e-10 | 441 |
eosinophil | 8.90e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.29e-80 | 98 |
blood island | 4.29e-80 | 98 |
bone marrow | 3.86e-73 | 76 |
hemolymphoid system | 1.02e-71 | 108 |
bone element | 4.18e-67 | 82 |
immune system | 3.17e-61 | 93 |
skeletal element | 2.68e-60 | 90 |
skeletal system | 2.64e-53 | 100 |
lateral plate mesoderm | 4.61e-33 | 203 |
musculoskeletal system | 6.21e-28 | 167 |
mesoderm | 2.58e-17 | 315 |
mesoderm-derived structure | 2.58e-17 | 315 |
presumptive mesoderm | 2.58e-17 | 315 |
connective tissue | 4.52e-14 | 371 |
blood | 3.02e-10 | 15 |
haemolymphatic fluid | 3.02e-10 | 15 |
organism substance | 3.02e-10 | 15 |