FFCP PHASE1:Hg19::chr11:12101706..12101713,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:12101706..12101713,- | |||
|description=CAGE_peak_at_chr11:12101706..12101713,- | |||
|id=chr11:12101706..12101713,- | |||
|ontology_enrichment_celltype=CL:0000144!3.33e-15!625;CL:0002371!4.34e-15!591;CL:0000359!1.71e-14!32;CL:0000548!1.51e-13!679;CL:0000004!1.51e-13!679;CL:0000255!1.51e-13!679;CL:0000012!3.05e-13!682;CL:0000192!5.72e-12!42;CL:0000514!5.72e-12!42;CL:0000055!8.69e-11!180;CL:0000680!3.71e-10!57;CL:0000056!3.71e-10!57;CL:0000355!3.71e-10!57;CL:0000220!4.51e-10!246;CL:0000003!7.45e-10!722;CL:0002321!8.30e-10!248;CL:0000187!1.68e-09!54;CL:0000183!2.14e-09!59;CL:0000393!1.85e-08!60;CL:0000211!1.85e-08!60;CL:0002368!1.03e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.38e-16;32!CL:0000569;1.08e-11;4!CL:0000723;2.18e-11;61!CL:0000134;3.00e-11;55!CL:0000048;1.40e-10;58!CL:0002166;2.54e-09;3!CL:0000192;3.64e-09;43!CL:0000034;2.55e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,5.95e-17,32;CL:0000569,1.23e-11,4;CL:0000011,1.23e-11,4;CL:0000192,1.37e-11,43;CL:0000514,1.37e-11,43;CL:0002166,2.75e-09,3;CL:0000680,9.47e-09,58;CL:0000056,9.47e-09,58;CL:0000355,9.47e-09,58;CL:0000187,3.08e-08,55;CL:0000048,1.53e-07,427;CL:0000723,2.98e-07,433;CL:0000393,4.48e-07,61;CL:0000211,4.48e-07,61;CL:0000034,7.00e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000011;1.08e-11;4!CL:0000514;3.64e-09;43 | |||
|ontology_enrichment_disease=DOID:2394!3.47e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.21e-18;14!DOID:120;1.88e-08;27!DOID:193;1.01e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.42e-18,14;DOID:120,1.53e-08,27;DOID:193,8.34e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0001637!3.96e-11!42;UBERON:0003509!3.96e-11!42;UBERON:0004572!3.96e-11!42;UBERON:0003914!5.94e-11!118;UBERON:0000486!1.06e-10!82;UBERON:0000914!1.10e-10!83;UBERON:0002329!1.10e-10!83;UBERON:0003077!1.10e-10!83;UBERON:0003059!1.10e-10!83;UBERON:0007282!1.10e-10!83;UBERON:0009618!1.10e-10!83;UBERON:0007285!1.10e-10!83;UBERON:0001981!1.10e-09!60;UBERON:0007500!1.10e-09!60;UBERON:0004537!1.10e-09!60;UBERON:0006965!1.10e-09!60;UBERON:0002049!3.75e-09!79;UBERON:0007798!3.75e-09!79;UBERON:0002385!5.67e-09!63;UBERON:0001015!5.67e-09!63;UBERON:0000383!5.67e-09!63;UBERON:0001134!7.09e-09!61;UBERON:0002036!7.09e-09!61;UBERON:0003082!7.09e-09!61;UBERON:0004573!1.07e-08!33;UBERON:0004571!1.07e-08!33;UBERON:0004872!1.17e-08!84;UBERON:0004290!2.04e-08!70;UBERON:0005256!2.37e-08!143;UBERON:0000055!7.74e-08!69;UBERON:0002090!1.71e-07!6;UBERON:0004535!2.85e-07!110;UBERON:0000475!3.33e-07!365;UBERON:0000467!4.35e-07!625;UBERON:0000480!5.21e-07!626;UBERON:0001009!8.95e-07!113;UBERON:0007196!9.59e-07!14;UBERON:0001558!9.59e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;1.93e-11;4!UBERON:0008895;1.93e-11;4!UBERON:0001637;7.08e-10;42!UBERON:0003509;7.08e-10;42!UBERON:0004572;7.08e-10;42!UBERON:0000992;1.27e-09;13!UBERON:0002118;2.52e-09;5!UBERON:0011159;3.82e-09;5!UBERON:0004573;5.90e-09;33!UBERON:0004571;5.90e-09;33!UBERON:0002119;9.04e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,8.29e-14,42;UBERON:0003509,8.29e-14,42;UBERON:0004572,8.29e-14,42;UBERON:0001708,1.34e-11,4;UBERON:0008895,1.34e-11,4;UBERON:0010188,2.89e-11,6;UBERON:0002539,2.89e-11,6;UBERON:0008816,2.89e-11,6;UBERON:0004573,9.89e-11,33;UBERON:0004571,9.89e-11,33;UBERON:0000486,1.44e-10,83;UBERON:0007500,6.57e-10,59;UBERON:0001981,6.57e-10,59;UBERON:0004537,6.57e-10,59;UBERON:0006965,6.57e-10,59;UBERON:0000992,8.89e-10,13;UBERON:0004872,9.16e-10,83;UBERON:0002118,1.57e-09,5;UBERON:0011159,2.86e-09,5;UBERON:0007524,4.76e-08,73;UBERON:0000055,4.93e-08,68;UBERON:0001134,6.21e-08,62;UBERON:0002036,6.21e-08,62;UBERON:0003082,6.21e-08,62;UBERON:0002385,1.45e-07,64;UBERON:0001015,1.45e-07,64;UBERON:0000383,1.45e-07,64;UBERON:0003914,1.49e-07,117;UBERON:0002329,2.27e-07,71;UBERON:0003059,2.27e-07,71;UBERON:0007282,2.27e-07,71;UBERON:0004290,2.27e-07,71;UBERON:0009618,2.27e-07,71;UBERON:0002049,2.28e-07,78;UBERON:0007798,2.28e-07,78;UBERON:0003077,3.27e-07,72;UBERON:0007285,3.27e-07,72;UBERON:0004535,5.90e-07,109;UBERON:0002119,8.32e-07,4 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,1.74467704820074,0,0,0,0.737201809504527,0,0.218441372130172,0,0.618831764800233,1.32558950291166,0.672325146451775,1.80808358407193,0,0,0.123121058076788,0.204000691244253,0,0,0,0.376627918784408,0,0,0,0,0,0,0.919421224478927,1.204823675113,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575384784644301,0,0.236482229888585,0.689491361473237,0.645484683583826,1.35426486594342,0,0,0.449446968890169,0.306083892370903,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,1.00267582127178,0,0,0.486634870302636,0.378139268656271,0.221729397462564,0.087834785693126,0,2.18577172975525,0.741568885568859,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,8.60659675285922,0.860509862246441,0,0,0,0.74000264525148,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0.877955241761676,0,0,1.24775401476023,3.58779271377724,0,0.211931901159562,1.80054657650641,0.206105058476878,3.09168648054755,0,1.18143432568886,0.292311015483596,0.757301322732344,0.0920498986422993,0.161646056818812,3.90510551768276,0.503760491138201,0.508681776931463,1.73934767846967,1.63647672354501,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0.110293972732394,0,0,0.269662616320329,0,0,0,2.80483547606892,0,1.47008711385542,0,0,0,0,0,0.343135620597051,0.329250856225877,0,0.703702806881416,0.462942225792648,0,0,1.44331342025273,0,0.939269553886573,0.288732895522148,0,0,0,0,0,0,0,7.49870671894216,2.18376766658517,2.69372684760534,0.268675568108545,0.581267877027924,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,1.14382394926518,0,0,2.93162565864362,1.42156779497018,0,0.602878754119172,0,0.199945982364114,0,0,0,0.479249710983165,0,0,1.59259437334337,0,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0.415941723061614,0,0.157702415033935,0.117141414992713,0,0,0,0,1.65932251687533,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.256278298511402,1.02341449813341,1.28683136914886,5.93672265779964,0.154209693802656,1.42049380250502,0.821271560138091,0,1.04589340613963,0,0.802025881213139,0,0,0,0,0.451199612907412,0.308061348417659,0.784349769176855,0,0.73886140225013,0,0.340187410553031,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0.325378394664303,0,0,0,3.44559322797703,1.30012049207304,0,0,0,0,0.137836572484531,0,0,0.170453254832202,0,0.165284915360978,0.192190067365106,4.72167036229961,0,0,5.66662224295152,0,1.54016790088044,2.12922412126809,0,1.48259375283136,5.72499546967965,0,1.58189712359363,0.190630193923825,0.511795582622668,0,0.636406495851874,3.13979456079692,0,0,0.117812402345686,0.404364963146632,1.58510321173008,1.68503382495592,0,0.243713489631284,1.05650146756755,0,0,0,1.65409603063837,0,1.75380354101505,0.578775534266688,0,1.62328301570163,1.8589409885985,0.563391205064483,0.717056761020258,0.294747123039363,1.07001315444375,0,0.211107635297664,0,0,0,0.962221127255121,0,1.08890984861323,0.0941438007767792,3.87454835404107,0,1.7737206141467,1.60806380144872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.47748896947538,0,0.614321404198464,0,0,0,0,0,0,0,0,0.20453736500431,0,0.311039587661807,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.82801391678303,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.293977192243133,0.609414446062818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0.209205692624666,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0.235265819698172,0,0,2.68658645196373,0.934853239388898,1.66441758450784,7.95492622155374,4.52822223154635,0.889811221596536,1.37304041038154,5.89800602676632,4.50767881690063,3.54852359975121,3.34523211043775,0.449803112163605,3.10525913752519,1.65882483136342,2.65841714557995,0,6.01030435988874,4.18885733385675,5.2893195316606,6.36470307208958,0.429642228169954,2.78420255927096,1.99047944349308,0,0,0,0,0,0,0,0,0,0,1.07453304648892,0.308801447160972,0,0,1.15748422962549,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,1.76337971845342,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0.60511520611056,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,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| |||
|short_description=p@chr11:12101706..12101713,- | |||
}} |
Latest revision as of 19:09, 23 July 2015
Short description: | p@chr11:12101706..12101713, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:12101706..12101713, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 5.95e-17 | 32 |
cardiac mesenchymal cell | 1.23e-11 | 4 |
migratory trunk neural crest cell | 1.23e-11 | 4 |
smooth muscle cell | 1.37e-11 | 43 |
smooth muscle myoblast | 1.37e-11 | 43 |
epithelial cell of Malassez | 2.75e-09 | 3 |
muscle precursor cell | 9.47e-09 | 58 |
myoblast | 9.47e-09 | 58 |
multi-potent skeletal muscle stem cell | 9.47e-09 | 58 |
muscle cell | 3.08e-08 | 55 |
multi fate stem cell | 1.53e-07 | 427 |
somatic stem cell | 2.98e-07 | 433 |
electrically responsive cell | 4.48e-07 | 61 |
electrically active cell | 4.48e-07 | 61 |
stem cell | 7.00e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.42e-18 | 14 |
female reproductive organ cancer | 1.53e-08 | 27 |
reproductive organ cancer | 8.34e-08 | 29 |