FFCP PHASE1:Hg19::chr8:122653465..122653470,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:122653465..122653470,-
|short_description=p2@HAS2
|description=CAGE_peak_2_at_HAS2_5end
|association_with_transcript=159bp_to_ENST00000303924,NM_005328,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3037 | |EntrezGene=3037 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4819 | |HGNC=4819 | ||
|TSSclassifier=strong | |||
|UniProt=Q92819 | |UniProt=Q92819 | ||
|association_with_transcript=159bp_to_ENST00000303924,NM_005328,uc003yph.2_5end | |||
|cluster_id=chr8:122653465..122653470,- | |||
|coexpression_cluster_id=C2007 | |||
|description=CAGE_peak_2_at_HAS2_5end | |||
|id=chr8:122653465..122653470,- | |||
|ontology_enrichment_celltype=CL:0000055!1.25e-30!180;CL:0000393!4.69e-17!60;CL:0000211!4.69e-17!60;CL:0000680!2.22e-16!57;CL:0000056!2.22e-16!57;CL:0000355!2.22e-16!57;CL:0000187!1.87e-14!54;CL:0000192!2.45e-12!42;CL:0000514!2.45e-12!42;CL:0000359!7.87e-12!32;CL:0000183!7.94e-12!59;CL:0000057!1.91e-11!75 | |||
|ontology_enrichment_celltype_v019=CL:0000680;2.32e-09;7!CL:0000359;1.56e-08;32!CL:0000192;1.67e-07;43!CL:0000393;2.22e-07;61!CL:0000211;2.22e-07;61!CL:0000056;4.28e-07;4!CL:0000187;5.52e-07;55!CL:0000723;6.61e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,8.08e-15,58;CL:0000056,8.08e-15,58;CL:0000355,8.08e-15,58;CL:0000393,3.16e-14,61;CL:0000211,3.16e-14,61;CL:0000187,3.35e-12,55;CL:0000034,1.03e-11,441;CL:0000048,1.77e-11,427;CL:0000723,6.19e-11,433;CL:0000057,2.82e-10,76;CL:0000192,2.68e-09,43;CL:0000514,2.68e-09,43;CL:0000359,5.75e-09,32;CL:0000515,4.53e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000355;3.01e-09;58!CL:0000514;1.67e-07;43!CL:0000515;4.28e-07;4 | |||
|ontology_enrichment_disease=DOID:2394!1.63e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;9.99e-13;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.73e-13,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.90e-19!83;UBERON:0002329!4.90e-19!83;UBERON:0003077!4.90e-19!83;UBERON:0003059!4.90e-19!83;UBERON:0007282!4.90e-19!83;UBERON:0009618!4.90e-19!83;UBERON:0007285!4.90e-19!83;UBERON:0001134!8.49e-17!61;UBERON:0002036!8.49e-17!61;UBERON:0003082!8.49e-17!61;UBERON:0002385!2.22e-16!63;UBERON:0001015!2.22e-16!63;UBERON:0000383!2.22e-16!63;UBERON:0004290!5.40e-16!70;UBERON:0000486!9.21e-15!82;UBERON:0005256!1.71e-11!143;UBERON:0003102!3.20e-10!95;UBERON:0001637!1.71e-09!42;UBERON:0003509!1.71e-09!42;UBERON:0004572!1.71e-09!42;UBERON:0000475!9.78e-09!365;UBERON:0004573!2.33e-08!33;UBERON:0004571!2.33e-08!33;UBERON:0000490!3.49e-07!138;UBERON:0001981!4.40e-07!60;UBERON:0007500!4.40e-07!60;UBERON:0004537!4.40e-07!60;UBERON:0006965!4.40e-07!60;UBERON:0004872!8.14e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;8.48e-11;31!UBERON:0001015;8.48e-11;31!UBERON:0000383;8.48e-11;31!UBERON:0001134;4.66e-08;16!UBERON:0002036;4.66e-08;16!UBERON:0000992;6.33e-08;13!UBERON:0002118;1.23e-07;5!UBERON:0004573;4.54e-07;33!UBERON:0004571;4.54e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.31e-15,62;UBERON:0002036,2.31e-15,62;UBERON:0003082,2.31e-15,62;UBERON:0002329,7.33e-15,71;UBERON:0003059,7.33e-15,71;UBERON:0007282,7.33e-15,71;UBERON:0004290,7.33e-15,71;UBERON:0009618,7.33e-15,71;UBERON:0002385,1.44e-14,64;UBERON:0001015,1.44e-14,64;UBERON:0000383,1.44e-14,64;UBERON:0003077,1.66e-14,72;UBERON:0007285,1.66e-14,72;UBERON:0007524,3.68e-14,73;UBERON:0000486,5.28e-13,83;UBERON:0007503,1.40e-12,78;UBERON:0005256,3.89e-10,122;UBERON:0000992,5.73e-08,13;UBERON:0002118,1.14e-07,5;UBERON:0004573,1.28e-07,33;UBERON:0004571,1.28e-07,33;UBERON:0001637,2.29e-07,42;UBERON:0003509,2.29e-07,42;UBERON:0004572,2.29e-07,42;UBERON:0003104,3.80e-07,160;UBERON:0009142,3.80e-07,160 | |||
|phase1_expression=0.726713517082227,3.42560838225573,0,0,0,0,5.06599756336621,0.631719873426831,2.61185628199839,0.982935746006035,0,0,0,2.84662611808107,0.331397375727916,0.672325146451775,0.602694528023977,1.46062018077475,0.487932798790507,0,0,0.626909442956176,0.286235987131057,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.255725123687061,0,0.50133791063589,1.44846518960824,3.1811437882044,2.91980922181582,0.189069634328136,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,1.77282716330412,2.25095607382472,0.286836620748814,2.4826786753885,0.560677600142307,0,1.72667283892012,1.55605517699883,0.134710672069688,0,0,1.15235184896,0.234321431833797,0,0,0,1.17434498643765,0.323745888736263,0.140450806702248,0.816616685019573,0.122834317311768,2.06651562351531,3.56400857184616,1.97813543422845,0,0.718618141816238,0.168336113954066,0.875829639103749,1.38532057742091,6.58466431321257,12.8724874235588,3.15499923703853,0.794025282120147,0.89694817844431,1.49490172172997,1.05965950579781,0.600182192168805,0.412210116953756,0.257640540045629,1.11670113798954,31.3923977968755,0.389748020644795,0,3.86609574297657,0,0.710019185033229,0.302256294682921,1.52604533079439,0.386521706326594,0.545492241181669,0.286804595389004,0.853815942907168,0.397589304964456,4.06678800043314,1.14027160516907,3.28017106138317,0,0,1.28648187638577,1.38134921352481,7.89425477654364,2.16563844500876,0.354920400119532,0,0,0.220587945464788,0,0,0,0,0,0,2.80483547606892,0,0,0,0,0,0,0.122988438543114,1.20097467208968,0.219500570817251,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.850650583454319,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.646358578788889,0,7.607724773004,0,0,0,0,0.266422179016099,1.00084595560703,0,0.823240336780769,6.18898750158097,1.06617584622764,5.543663110534,0,0,0,0,0,0,0,0,21.3955357561078,13.1750989067497,2.26023954805422,15.0411209121512,0,0,0,0,0,0,1.54657762555539,0.502548796003046,1.91381625495949,0,0,0,3.55805325985506,0,0,0.623912584592421,0.892144943985809,0.946214490203608,1.28855556491985,0.601892199455438,0,1.03473071292505,4.64957918974806,6.0841825618762,0.868836144680828,0,0,0,0,0,0,0,0,0,1.99500565274481,1.40330047216537,0,0.511707249066704,0.64341568457443,0,27.29511580307,9.94345661753512,22.1743321237285,3.63478100428535,3.7187321107187,0.120859449591622,1.80455823272956,0.0920809889358963,1.60740227430449,1.27463817604702,0.655622074797121,0,0,0.784349769176855,0,0.316654886678627,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,1.72279661398852,0,0,2.99679226705578,0,0,1.10269257987624,1.28904293841928,1.45016693914229,1.61930592090592,0.712256285173899,0.165284915360978,0,0,0,0.464845549297286,3.77774816196768,12.5466708628908,1.54016790088044,1.06461206063404,10.4391959049009,1.48259375283136,0.715624433709956,0,0.632758849437452,0.190630193923825,0.511795582622668,4.2793898803392,1.59101623962968,0,1.79872457583315,0.823611089208164,2.00281083987667,5.45892700247953,1.58510321173008,1.68503382495592,0,11.6982475023017,0,0,0.141405431953713,1.13008116620243,5.51365343546124,3.98063385144732,0.876901770507525,0.578775534266688,0,0.405820753925408,1.8589409885985,0.845086807596724,4.7325746227337,0.687743287091848,1.426684205925,7.09522128141196,2.32218398827431,0,0.75894634753143,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,4.2620422020962,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0.276283915531148,0,0,0,9.64222721751603,0,0.179021174675609,0,0.197286811273867,0,1.11136990144637,0,0,0,0,0,0,5.12070517284748,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0,0,0,0,0.461701551022782,0,0,0,0,0.638002319463839,2.38153742844842,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,0,0.707660516026713,1.83309043480088,0,0,0,0.202203398942031,2.40773294189637,0.234264445725339,0,0,0,0,0,0.30607276163049,0.252746318513952,0,0,0,0,0,0,0,1.24807205711825,0,0.391969589657511,0.783532859223623,0.17472666824203,0,0.0967563312890851,0,0,0.581934098930517,0.176512253383001,0.677942222341597,0.274083849293502,2.18586072873289,0,0.195551382734803,0.320635281006135,0,0,0,0,0,0.288109595976299,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,4.18923601908381,0,0,0,0,1.11585728720936,0.268733889946905,7.20599767084807,0,0,0,0,0,0,0,0.136203406111576,3.69732241469544,0.825236619583403,1.66176135211674,0,0,0,0,0,0.314727528809989,0.105600336519406,0,0,0.714695326373367,0,0,2.17199840701485,2.5926644736038,9.79762080328227,0,0.246277562248017,64.5770602566748,1.81299346432201,0,0,0.129282956361551,0.52893040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| ||
|short_description=p2@HAS2 | |||
}} | }} |
Latest revision as of 23:06, 15 September 2015
Short description: | p2@HAS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HAS2_5end |
Coexpression cluster: | C2007_liposarcoma_Fibroblast_Myoblast_Preadipocyte_mesenchymal_basal_Smooth |
Association with transcript: | 159bp_to_ENST00000303924, NM_005328, uc003yph.2_5end |
EntrezGene: | HAS2 |
HGNC: | 4819 |
UniProt: | Q92819 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 8.08e-15 | 58 |
myoblast | 8.08e-15 | 58 |
multi-potent skeletal muscle stem cell | 8.08e-15 | 58 |
electrically responsive cell | 3.16e-14 | 61 |
electrically active cell | 3.16e-14 | 61 |
muscle cell | 3.35e-12 | 55 |
stem cell | 1.03e-11 | 441 |
multi fate stem cell | 1.77e-11 | 427 |
somatic stem cell | 6.19e-11 | 433 |
fibroblast | 2.82e-10 | 76 |
smooth muscle cell | 2.68e-09 | 43 |
smooth muscle myoblast | 2.68e-09 | 43 |
vascular associated smooth muscle cell | 5.75e-09 | 32 |
skeletal muscle myoblast | 4.53e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.31e-15 | 62 |
striated muscle tissue | 2.31e-15 | 62 |
myotome | 2.31e-15 | 62 |
somite | 7.33e-15 | 71 |
presomitic mesoderm | 7.33e-15 | 71 |
presumptive segmental plate | 7.33e-15 | 71 |
dermomyotome | 7.33e-15 | 71 |
trunk paraxial mesoderm | 7.33e-15 | 71 |
muscle tissue | 1.44e-14 | 64 |
musculature | 1.44e-14 | 64 |
musculature of body | 1.44e-14 | 64 |
paraxial mesoderm | 1.66e-14 | 72 |
presumptive paraxial mesoderm | 1.66e-14 | 72 |
dense mesenchyme tissue | 3.68e-14 | 73 |
multilaminar epithelium | 5.28e-13 | 83 |
epithelial vesicle | 1.40e-12 | 78 |
trunk mesenchyme | 3.89e-10 | 122 |
female gonad | 5.73e-08 | 13 |
right ovary | 1.14e-07 | 5 |
systemic artery | 1.28e-07 | 33 |
systemic arterial system | 1.28e-07 | 33 |
artery | 2.29e-07 | 42 |
arterial blood vessel | 2.29e-07 | 42 |
arterial system | 2.29e-07 | 42 |
mesenchyme | 3.80e-07 | 160 |
entire embryonic mesenchyme | 3.80e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.73e-13 | 14 |