FFCP PHASE1:Hg19::chr11:64660916..64660922,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000413053,uc009ypx.2_5end | |||
|cluster_id=chr11:64660916..64660922,- | |||
|coexpression_cluster_id=C201 | |||
|description=CAGE_peak_1_at_ENST00000413053_5end,CAGE_peak_1_at_uc009ypx.2_5end | |||
|id=chr11:64660916..64660922,- | |||
|ontology_enrichment_celltype=CL:0000181!9.60e-15!12;CL:0000417!9.60e-15!12;CL:0000668!9.60e-15!12;CL:0000414!9.60e-15!12;CL:0000412!9.60e-15!12;CL:0000182!9.60e-15!12;CL:0000223!9.32e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.03e-23;12!CL:0002178;6.49e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.05e-23,12;CL:0000223,7.39e-13,58;CL:0002178,6.59e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009497;6.26e-28;13!UBERON:0004161;1.74e-26;11!UBERON:0003104;3.08e-19;31!UBERON:0001041;4.15e-11;30!CL:0000223;7.54e-08;58!UBERON:0006595;2.70e-07;86 | |||
|ontology_enrichment_disease=DOID:3493!4.79e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.86e-10;2!DOID:3119;4.11e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.86e-10,2;DOID:3119,4.14e-08,14;DOID:305,9.37e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0009854!6.16e-19!23;UBERON:0005409!2.19e-18!35;UBERON:0005172!1.22e-17!55;UBERON:0005173!1.22e-17!55;UBERON:0009497!3.59e-17!25;UBERON:0000015!3.59e-17!25;UBERON:0002423!3.59e-17!25;UBERON:0006235!3.59e-17!25;UBERON:0004161!3.59e-17!25;UBERON:0008835!9.49e-17!22;UBERON:0003894!9.49e-17!22;UBERON:0004921!1.56e-16!129;UBERON:0004185!1.56e-16!129;UBERON:0009856!2.21e-16!26;UBERON:0000160!2.39e-16!27;UBERON:0002417!2.28e-15!61;UBERON:0000916!2.28e-15!61;UBERON:0007499!2.12e-14!25;UBERON:0002107!6.87e-14!19;UBERON:0006925!6.87e-14!19;UBERON:0008836!6.87e-14!19;UBERON:0001007!1.98e-13!155;UBERON:0001555!1.98e-13!155;UBERON:0007026!1.98e-13!155;UBERON:0000059!2.16e-13!11;UBERON:0003929!1.17e-11!54;UBERON:0004119!1.30e-11!169;UBERON:0000925!1.30e-11!169;UBERON:0006595!1.30e-11!169;UBERON:0005057!1.71e-11!26;UBERON:0005177!2.02e-11!107;UBERON:0004907!3.01e-10!5;UBERON:0000077!1.63e-09!130;UBERON:0001155!8.43e-09!9;UBERON:0002113!3.13e-08!27;UBERON:0003918!3.13e-08!27;UBERON:0005095!3.13e-08!27;UBERON:0007687!3.13e-08!27;UBERON:0000949!3.21e-08!45;UBERON:0000489!3.94e-08!32;UBERON:0002368!6.26e-08!35;UBERON:0000466!8.69e-08!126;UBERON:0001041!9.14e-08!98;UBERON:0002365!1.07e-07!31;UBERON:0002330!1.07e-07!31;UBERON:0009569!1.37e-07!113;UBERON:0001052!1.57e-07!4;UBERON:0003104!2.64e-07!238;UBERON:0009142!2.64e-07!238;UBERON:0005911!2.93e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;4.37e-39;22!UBERON:0000160;6.47e-32;17!UBERON:0002423;1.12e-24;25!UBERON:0002107;6.67e-23;19!UBERON:0006925;6.67e-23;19!UBERON:0004921;1.04e-22;33!UBERON:0000059;1.68e-21;11!UBERON:0004907;7.07e-16;5!UBERON:0001007;3.42e-14;81!UBERON:0001155;5.87e-14;9!UBERON:0002365;4.92e-13;31!UBERON:0002330;4.92e-13;31!UBERON:0001052;1.83e-11;4!UBERON:0002368;2.54e-11;33!UBERON:0000949;5.43e-10;43!UBERON:0002108;5.70e-10;4!UBERON:0000945;9.79e-09;5!UBERON:0010039;9.79e-09;5!UBERON:0005172;3.95e-08;52!UBERON:0005173;3.95e-08;52!UBERON:0001555;5.19e-08;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.21e-34,25;UBERON:0000160,6.47e-32,17;UBERON:0009854,5.01e-27,23;UBERON:0009497,1.12e-24,25;UBERON:0000015,1.12e-24,25;UBERON:0002423,1.12e-24,25;UBERON:0006235,1.12e-24,25;UBERON:0004161,1.12e-24,25;UBERON:0009856,1.26e-23,26;UBERON:0008835,1.35e-23,22;UBERON:0003894,1.35e-23,22;UBERON:0004921,1.73e-23,118;UBERON:0002107,6.75e-23,19;UBERON:0006925,6.75e-23,19;UBERON:0008836,6.75e-23,19;UBERON:0000059,1.68e-21,11;UBERON:0007499,1.66e-20,25;UBERON:0001007,1.03e-19,145;UBERON:0001555,1.03e-19,145;UBERON:0007026,1.03e-19,145;UBERON:0004119,2.72e-17,160;UBERON:0000925,2.72e-17,160;UBERON:0006595,2.72e-17,160;UBERON:0003929,1.76e-16,54;UBERON:0004907,7.08e-16,5;UBERON:0005172,4.87e-14,54;UBERON:0005173,4.87e-14,54;UBERON:0001155,5.87e-14,9;UBERON:0002365,2.54e-13,31;UBERON:0002330,2.54e-13,31;UBERON:0000949,1.16e-12,45;UBERON:0002417,2.44e-12,60;UBERON:0000916,2.44e-12,60;UBERON:0002368,1.37e-11,35;UBERON:0001052,1.83e-11,4;UBERON:0005911,2.97e-11,82;UBERON:0011216,1.77e-10,223;UBERON:0002108,5.70e-10,4;UBERON:0005177,1.07e-09,101;UBERON:0001041,9.05e-09,87;UBERON:0002530,1.43e-07,59;UBERON:0003104,2.35e-07,160;UBERON:0009142,2.35e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61130724598361,0.821005894499457,0.393553906568396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01251873644739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.69716365721711,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4079531339648,2.94848165003288,3.54473944008842,0,37.3884853171065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.4252469809842,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,11.4375522928972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1089684916599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6612594498,0,0,0,0,0,0.890894042497916,0,0,0,0,0,0,0.398495976502139,25.1418363133344,5.2905877049398,0,0.123084805461069,0,0.0898683511473268,2.86433879480975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,4.09923907158428,0,142.322456144226,98.3648117277132,107.541305508318,0,0,0,0.134802265961354,0,0,0,0,0,0,104.052015801851,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,1.39781334593624,0,0,0,0,0,0,0,0,0,0,0,0,33.7255731688177,0,2.73771792592801,0,8.92293988882216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,3.49487848582361,5.19969003227676,3.79112948553366,5.19007287677224,1.67326718575073,0,0,0,0,0,0,0,0,0,0,4.80714814525109,4.09145787452985,0,0,0,0,0,0,0,0,0,0,0,0,0,7.4741639175822,7.95041333473328,0,0,3.93499727133958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30617366729152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.37816813479711,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64353812307926,53.8763645100602,0.215927591218621,0.9555033757741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57040373784389,19.7507038471276,0,0,0,0,0,0,0,0,0,0,149.331995938873,119.552079595665,0,0,0,0,0,0.8453114551668,0,0,0,0,0,0,0,3.65168194123259,0,0,0,0,0,79.3540260773101,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.267964130156178,0,0,0,0,0,0.124149428591716,0,0,0,0.435433495793923,0,0,0.358611026963382,0,0,0,0,5.92846333903473,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000413053,p1@uc009ypx.2 | |||
}} |
Latest revision as of 00:24, 24 July 2015
Short description: | p1@ENST00000413053, p1@uc009ypx.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000413053_5end, CAGE_peak_1_at_uc009ypx.2_5end |
Coexpression cluster: | C201_colon_small_adenocarcinoma_duodenum_temporal_signet_gall |
Association with transcript: | 0bp_to_ENST00000413053, uc009ypx.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.05e-23 | 12 |
endodermal cell | 7.39e-13 | 58 |
epithelial cell of stomach | 6.59e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.86e-10 | 2 |
gastrointestinal system cancer | 4.14e-08 | 14 |
carcinoma | 9.37e-07 | 106 |