FFCP PHASE1:Hg19::chr11:69457902..69457918,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:69457902..69457918,+ | |||
|coexpression_cluster_id=C1350 | |||
|description=CAGE_peak_at_chr11:69457902..69457918,+ | |||
|id=chr11:69457902..69457918,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.15e-27!180;CL:0002321!3.71e-21!248;CL:0000220!3.97e-21!246;CL:0000222!2.92e-19!119;CL:0000192!3.53e-18!42;CL:0000514!3.53e-18!42;CL:0000359!1.76e-17!32;CL:0000680!2.01e-16!57;CL:0000056!2.01e-16!57;CL:0000355!2.01e-16!57;CL:0000183!1.18e-15!59;CL:0000187!7.21e-15!54;CL:0000393!2.86e-13!60;CL:0000211!2.86e-13!60;CL:0000548!4.11e-13!679;CL:0000004!4.11e-13!679;CL:0000255!4.11e-13!679;CL:0000012!1.71e-12!682;CL:0000057!2.91e-12!75;CL:0000144!1.23e-10!625;CL:0002371!1.72e-08!591;CL:0002539!6.86e-08!10;CL:0000066!2.65e-07!254;CL:0000003!9.43e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.27e-24;32!CL:0000192;1.65e-17;43!CL:0002539;3.64e-12;10!CL:0000187;2.97e-09;55!CL:0002334;2.06e-07;12!CL:1000497;2.62e-07;17!CL:0002518;2.62e-07;17!CL:0002595;3.43e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.30e-25,32;CL:0000192,3.13e-23,43;CL:0000514,3.13e-23,43;CL:0000222,5.92e-21,121;CL:0000680,5.64e-20,58;CL:0000056,5.64e-20,58;CL:0000355,5.64e-20,58;CL:0000187,1.29e-17,55;CL:0000393,1.28e-15,61;CL:0000211,1.28e-15,61;CL:0002321,8.74e-13,250;CL:0002539,4.28e-12,10;CL:0000048,2.82e-08,427;CL:0002334,6.66e-08,12;CL:0000723,9.33e-08,433;CL:0000057,1.90e-07,76;CL:0002595,2.84e-07,5;CL:1000497,4.20e-07,17;CL:0002518,4.20e-07,17;CL:0000034,4.24e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;1.65e-17;43!CL:0000355;1.97e-09;58 | |||
|ontology_enrichment_disease=DOID:2394!6.49e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.72e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.80e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000055!9.73e-20!69;UBERON:0005256!1.23e-19!143;UBERON:0002049!6.49e-19!79;UBERON:0007798!6.49e-19!79;UBERON:0002100!2.35e-18!216;UBERON:0001637!4.23e-18!42;UBERON:0003509!4.23e-18!42;UBERON:0004572!4.23e-18!42;UBERON:0001981!8.53e-18!60;UBERON:0007500!8.53e-18!60;UBERON:0004537!8.53e-18!60;UBERON:0006965!8.53e-18!60;UBERON:0004290!5.62e-17!70;UBERON:0003914!1.19e-16!118;UBERON:0000914!2.06e-16!83;UBERON:0002329!2.06e-16!83;UBERON:0003077!2.06e-16!83;UBERON:0003059!2.06e-16!83;UBERON:0007282!2.06e-16!83;UBERON:0009618!2.06e-16!83;UBERON:0007285!2.06e-16!83;UBERON:0004573!2.02e-15!33;UBERON:0004571!2.02e-15!33;UBERON:0004872!8.61e-14!84;UBERON:0001134!8.84e-14!61;UBERON:0002036!8.84e-14!61;UBERON:0003082!8.84e-14!61;UBERON:0000490!1.37e-13!138;UBERON:0000486!3.97e-13!82;UBERON:0002385!5.68e-13!63;UBERON:0001015!5.68e-13!63;UBERON:0000383!5.68e-13!63;UBERON:0000475!3.74e-12!365;UBERON:0003104!1.15e-11!238;UBERON:0009142!1.15e-11!238;UBERON:0004535!2.56e-11!110;UBERON:0001009!2.89e-10!113;UBERON:0003102!1.87e-08!95;UBERON:0000468!2.56e-08!659;UBERON:0000947!2.73e-08!21;UBERON:0010191!2.73e-08!21;UBERON:0004237!6.86e-08!10;UBERON:0004695!6.86e-08!10;UBERON:0002111!6.86e-08!10;UBERON:0004178!6.86e-08!10;UBERON:0000483!7.97e-08!309;UBERON:0000119!8.33e-08!312;UBERON:0004111!1.29e-07!241;UBERON:0000481!3.18e-07!347;UBERON:0000477!5.03e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.37e-16;33!UBERON:0004571;1.37e-16;33!UBERON:0001637;2.63e-15;42!UBERON:0003509;2.63e-15;42!UBERON:0004572;2.63e-15;42!UBERON:0004237;3.64e-12;10!UBERON:0004695;3.64e-12;10!UBERON:0002111;3.64e-12;10!UBERON:0004178;3.64e-12;10!UBERON:0007500;8.14e-12;56!UBERON:0001981;8.14e-12;56!UBERON:0004537;8.14e-12;56!UBERON:0003914;3.65e-11;74!UBERON:0000055;1.09e-10;65!UBERON:0002049;6.69e-09;75!UBERON:0007798;6.69e-09;75!UBERON:0000947;7.00e-09;21!UBERON:0010191;7.00e-09;21!UBERON:0003513;8.05e-09;7!UBERON:0003834;3.43e-07;5!UBERON:0001533;3.43e-07;5!UBERON:0001135;4.46e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,7.65e-23,42;UBERON:0003509,7.65e-23,42;UBERON:0004572,7.65e-23,42;UBERON:0007503,1.18e-22,78;UBERON:0002329,1.01e-20,71;UBERON:0003059,1.01e-20,71;UBERON:0007282,1.01e-20,71;UBERON:0004290,1.01e-20,71;UBERON:0009618,1.01e-20,71;UBERON:0000055,1.52e-20,68;UBERON:0003077,3.21e-20,72;UBERON:0007285,3.21e-20,72;UBERON:0007524,9.90e-20,73;UBERON:0007500,1.92e-19,59;UBERON:0001981,1.92e-19,59;UBERON:0004537,1.92e-19,59;UBERON:0006965,1.92e-19,59;UBERON:0002049,6.95e-19,78;UBERON:0007798,6.95e-19,78;UBERON:0004573,1.05e-18,33;UBERON:0004571,1.05e-18,33;UBERON:0001134,8.12e-18,62;UBERON:0002036,8.12e-18,62;UBERON:0003082,8.12e-18,62;UBERON:0002385,7.58e-17,64;UBERON:0001015,7.58e-17,64;UBERON:0000383,7.58e-17,64;UBERON:0005256,7.79e-16,122;UBERON:0000486,1.51e-15,83;UBERON:0003914,3.42e-15,117;UBERON:0004872,1.38e-14,83;UBERON:0003104,2.66e-14,160;UBERON:0009142,2.66e-14,160;UBERON:0002100,5.27e-14,199;UBERON:0004535,1.88e-12,109;UBERON:0000490,3.18e-12,148;UBERON:0004237,4.28e-12,10;UBERON:0004695,4.28e-12,10;UBERON:0002111,4.28e-12,10;UBERON:0004178,4.28e-12,10;UBERON:0001009,1.02e-11,112;UBERON:0003513,6.71e-09,7;UBERON:0000947,7.48e-09,21;UBERON:0010191,7.48e-09,21;UBERON:0000926,4.68e-08,315;UBERON:0004120,4.68e-08,315;UBERON:0006603,4.68e-08,315;UBERON:0003834,2.84e-07,5;UBERON:0001533,2.84e-07,5;UBERON:0001135,4.89e-07,15 | |||
|phase1_expression=0.181678379270557,2.78330681058278,0.281908808191942,2.00146596706261,0,1.74467704820074,2.53299878168311,0,0.261185628199839,1.22866968250754,0,0.436882744260345,1.84636884759917,0,0.331397375727916,7.39557661096953,5.42425075221579,9.49403117503585,9.27072317701963,0.246242116153576,1.63200552995402,0,0,1.09499540058307,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.434539556882471,0.795285947051099,1.45990461090791,0.661743720148475,1.33037638477538,0.263504357079378,0.0654895377488563,0,0.370784442784429,0,0,0.26591592103773,0,0,0,0.993812036833525,0,0.694281003215189,0,0,1.10047216776027,1.04497483268405,2.84258435086262,5.69226020298736,0.66944122552934,1.20848795132744,1.52054421143703,2.4406205754817,1.47065232138347,0.81014194788176,0.446498641420399,0.22452937262617,0.450445921933289,1.53316637465883,0,0.916008719652036,0,0,0,1.49091585508596,3.03913227994991,5.16395805171553,0.860509862246441,3.90135220418193,1.12135520028461,1.06748995729705,0.98667019366864,0,0.808264032418128,0.163461903113459,0.151357427644931,0,0,2.80944069147288,1.1409436430889,3.58676833324323,0.587172493218824,0.323745888736263,0.98315564691574,2.24569588380383,0.737005903870608,0.826606249406124,1.18800285728205,2.22540236350701,0.910161361938026,0.718618141816238,0.168336113954066,0.625592599359821,1.6623846929051,1.31693286264251,2.45190236639216,0.901428353439581,0.567160915800105,2.15267562826634,1.06778694409284,1.05965950579781,0.600182192168805,0.824420233907511,0.515281080091258,0.930584281657949,1.35021065793013,1.75386609290158,0.504867548488229,0.552299391853796,1.13152239773168,1.77504796258307,2.21654616100809,0.339121184620975,0,0.272746120590835,0.573609190778008,0.121973706129595,0.397589304964456,0.580969714347592,0.207322110030741,0.504641701751257,0,3.12899064659632,4.5026865673502,4.14404764057442,0.928735856063958,2.88751792667834,0.118306800039844,0.337169380156203,0.482022059766964,0.220587945464788,0.435758888184812,0.474541238222193,0,0.392442930250692,0,2.21446636387394,2.80483547606892,0.4115740113314,0,0,0,0.590789906681404,0,0.737930631258681,0.857839051492628,0.768251997860379,0,0,0.277765335475589,0.325808305310325,0,4.3299402607582,0.579652024875384,0.70445216541493,1.01056513432752,2.31492756288305,1.14152491340759,2.37061319387782,2.57545848628462,0,0.468008530278475,0.743155811443641,0,0.839910640994298,0.992425680696705,0.179117045405697,0.581267877027924,0,0,0,0,0,0.12624243342638,1.8414389344729,11.8416411923066,1.17217447210047,0,2.26220483947312,5.70651809903443,3.42991719156694,0.336393253036082,0,0.5867062865676,1.16344544182,0,0.845302752556,3.72313363218819,6.24044621468197,0,0,0.799266537048298,0.142977993658148,0,1.64648067356154,0,0,0,0.602878754119172,1.74306691720059,0.399891964728228,0,0,0,1.67737398844108,0,1.42636905040718,6.51515880004106,1.64381058040307,3.9393411912777,0,0,0,0,0.254094624222463,0,0,0,1.27587750330633,0,0,0,0.12269149171914,0,0.813795071099207,0.415941723061614,0.713715955188647,0.157702415033935,0.819989904948992,2.40756879782175,2.27407504055985,1.03473071292505,0,2.02806085395873,1.21637060255316,0.195801157462741,1.02943027143257,0,0,0,0,0,0,1.98486246255021,1.38115775959256,1.96462066103151,1.02511319404561,3.07024349440022,2.0911009748669,0,1.69630663182921,1.9531789784444,1.14978018419333,1.55776328755086,1.97557643381931,0.966875596732978,3.20810352485256,0.828728900423067,0.34444334449382,2.00300284807389,1.44236856455367,0.902399225814824,4.00479752942957,0,4.38417673959782,2.32213583564327,2.27466768141793,3.57196781080683,1.0795795805107,1.54227252690289,0.270946437543853,1.00337954770971,3.56826782263054,2.49322802678617,0.895499018888713,0,0,1.79515087581472,3.60816110269676,0,0,0,0,0.574265537996172,0,1.6068392984416,0.096670718292122,0.154048617114644,0,1.24052915236078,0.107420244868274,0.290033387828457,0.681813019328807,0.0890320356467374,0.991709492165869,0.192190067365106,0.255225424989168,0.10115778085555,13.015675380324,6.2962469366128,4.1822236209636,1.23213432070436,2.66153015158511,7.82939692867565,9.266210955196,4.00749682877575,0,1.58189712359363,1.71567174531442,3.58256907835867,1.28381696410176,0.95460974377781,3.13979456079692,0.899362287916574,0.54907405947211,0.353437207037059,5.25674452090622,15.8510321173008,3.79132610615083,0,4.87426979262569,10.5650146756755,0.545999645631943,1.27264888758341,6.78048699721457,2.75682671773062,13.9322184800656,22.7994460331957,2.31510213706675,0.655894752046633,4.46402829317949,4.3375289733965,3.66204283291914,0.430234056612155,0.196498082026242,4.280052617775,1.41904425628239,0,0,0,0,0.192444225451024,0,0,0.282431402330337,0.86101074534246,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0.98016086392412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| |||
|short_description=p@chr11:69457902..69457918,+ | |||
}} |
Latest revision as of 01:57, 24 July 2015
Short description: | p@chr11:69457902..69457918, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:69457902..69457918, + |
Coexpression cluster: | C1350_neuroectodermal_neuroblastoma_Melanocyte_Smooth_leiomyoma_hepatoma_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.30e-25 | 32 |
smooth muscle cell | 3.13e-23 | 43 |
smooth muscle myoblast | 3.13e-23 | 43 |
mesodermal cell | 5.92e-21 | 121 |
muscle precursor cell | 5.64e-20 | 58 |
myoblast | 5.64e-20 | 58 |
multi-potent skeletal muscle stem cell | 5.64e-20 | 58 |
muscle cell | 1.29e-17 | 55 |
electrically responsive cell | 1.28e-15 | 61 |
electrically active cell | 1.28e-15 | 61 |
embryonic cell | 8.74e-13 | 250 |
aortic smooth muscle cell | 4.28e-12 | 10 |
multi fate stem cell | 2.82e-08 | 427 |
preadipocyte | 6.66e-08 | 12 |
somatic stem cell | 9.33e-08 | 433 |
fibroblast | 1.90e-07 | 76 |
smooth muscle cell of the subclavian artery | 2.84e-07 | 5 |
kidney cell | 4.20e-07 | 17 |
kidney epithelial cell | 4.20e-07 | 17 |
stem cell | 4.24e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.80e-07 | 14 |