FFCP PHASE1:Hg19::chr12:2027805..2027827,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=93589 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20202 | |||
|TSSclassifier=strong | |||
|UniProt=E7EUE0 | |||
|association_with_transcript=-2bp_to_ENST00000444595_5end | |||
|cluster_id=chr12:2027805..2027827,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_2_at_CACNA2D4_5end | |||
|id=chr12:2027805..2027827,- | |||
|ontology_enrichment_celltype=CL:0000763!9.47e-22!112;CL:0000049!9.47e-22!112;CL:0000037!1.03e-12!172;CL:0000566!1.03e-12!172;CL:0002032!6.58e-12!165;CL:0000837!6.58e-12!165;CL:0000988!2.18e-11!182;CL:0002274!1.44e-10!5;CL:0000457!1.44e-10!5;CL:0002191!1.44e-10!5;CL:0000097!1.44e-10!5;CL:0000831!1.44e-10!5;CL:0002028!1.44e-10!5;CL:0000784!5.02e-08!3;CL:0000839!1.59e-07!70;CL:0002322!6.64e-07!5;CL:0000451!9.59e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000784;3.64e-19;3!CL:0000764;1.14e-12;2!CL:0000558;1.14e-12;2!CL:0002032;2.14e-07;1!CL:0000557;2.14e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,3.32e-19,3;CL:0000764,1.08e-12,2;CL:0000765,1.08e-12,2;CL:0000050,1.08e-12,2;CL:0000038,1.08e-12,2;CL:0000558,1.08e-12,2;CL:0000547,1.08e-12,2;CL:0000549,1.08e-12,2;CL:0000550,1.08e-12,2;CL:0000552,1.08e-12,2;CL:0000763,2.46e-09,108;CL:0000049,2.46e-09,108;CL:0000037,8.28e-07,168 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.36e-09;3 | |||
|ontology_enrichment_disease=DOID:8692!1.50e-25!31;DOID:1240!4.91e-19!39;DOID:2531!3.70e-13!51;DOID:0060083!3.70e-13!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.32e-11;31!DOID:1240;7.38e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.86e-11,31;DOID:1240,7.22e-09,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;4.74e-15;4!UBERON:0010133;4.74e-15;4!UBERON:0001905;4.27e-14;2!UBERON:0002757;4.27e-14;2!UBERON:0010134;4.27e-14;2!UBERON:0005408;4.27e-14;2!UBERON:0001899;4.27e-14;2!UBERON:0001894;8.40e-09;7!UBERON:0002784;1.83e-07;4!UBERON:0002426;3.61e-07;1!UBERON:0003831;3.61e-07;1!UBERON:0003898;3.61e-07;1!UBERON:0004830;3.61e-07;1!UBERON:0003830;3.61e-07;1!UBERON:0005175;3.61e-07;1!UBERON:0001774;3.61e-07;1!UBERON:0001103;3.61e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,4.74e-15,4;UBERON:0010133,4.74e-15,4;UBERON:0001905,4.27e-14,2;UBERON:0002757,4.27e-14,2;UBERON:0010134,4.27e-14,2;UBERON:0005408,4.27e-14,2;UBERON:0001899,4.27e-14,2;UBERON:0001894,8.40e-09,7;UBERON:0006222,8.40e-09,7;UBERON:0002784,1.83e-07,4;UBERON:0002426,3.01e-07,1;UBERON:0003831,3.01e-07,1;UBERON:0003898,3.01e-07,1;UBERON:0004830,3.01e-07,1;UBERON:0003830,3.01e-07,1;UBERON:0005175,3.01e-07,1;UBERON:0001774,3.01e-07,1;UBERON:0001103,3.01e-07,1;UBERON:0010084,3.01e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.130979075497713,0,0,0.324547393654683,0.522389211897802,0.26591592103773,4.5313218618015,2.85997455390064,4.82894751728434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.530119073285941,0.348581828608555,0.310983165046111,0,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0.621984346622316,1.00883967391873,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.7983512377401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31555925987561,1.5686127061494,0,0,0,0.103041011647722,0,0,0,0,0,0.386682873168488,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,11.8537206325374,0,0.561594356226918,0.456469358066384,1.09675927041116,5.01268954180134,2.03150133361924,0.321176150207399,0.201799707191048,0.425846237690326,3.43505344755765,0.921722292925374,1.78940886313933,0.500547425135725,0.390776190804081,0,2.46174797895425,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,14.3240263663524,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0.885741385813839,0,0,0,0,1.75508317723178,0,0,0,0,0,0,0,0,0,0,0,0.31396051279005,0.997270091400938,0,0,0,0.189753732724185,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0.134802265961354,1.60515529459758,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.8632844500551,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,6.77908311187531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853533837553127,0,0,0,0,0,0,0,0.157265941855896,0,0.33946505990805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98374333174412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,208.923715992532,201.770233331294,0,3.64259506162076,0.177404740325278,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,46.7456598915333,18.1715653492636,0,2.43401581223611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,7.69583617218004,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,15.3305186223839,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0.434523000071005,0,0,0,0.870866991587845,1.02669990325584,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@CACNA2D4 | |||
}} |
Latest revision as of 18:31, 17 September 2015
Short description: | p2@CACNA2D4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CACNA2D4_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -2bp_to_ENST00000444595_5end |
EntrezGene: | CACNA2D4 |
HGNC: | 20202 |
UniProt: | E7EUE0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 3.32e-19 | 3 |
erythroid lineage cell | 1.08e-12 | 2 |
erythroblast | 1.08e-12 | 2 |
megakaryocyte-erythroid progenitor cell | 1.08e-12 | 2 |
erythroid progenitor cell | 1.08e-12 | 2 |
reticulocyte | 1.08e-12 | 2 |
proerythroblast | 1.08e-12 | 2 |
basophilic erythroblast | 1.08e-12 | 2 |
polychromatophilic erythroblast | 1.08e-12 | 2 |
orthochromatic erythroblast | 1.08e-12 | 2 |
myeloid cell | 2.46e-09 | 108 |
common myeloid progenitor | 2.46e-09 | 108 |
hematopoietic stem cell | 8.28e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 4.74e-15 | 4 |
neuroendocrine gland | 4.74e-15 | 4 |
pineal body | 4.27e-14 | 2 |
regional part of epithalamus | 4.27e-14 | 2 |
secretory circumventricular organ | 4.27e-14 | 2 |
circumventricular organ | 4.27e-14 | 2 |
epithalamus | 4.27e-14 | 2 |
diencephalon | 8.40e-09 | 7 |
future diencephalon | 8.40e-09 | 7 |
regional part of diencephalon | 1.83e-07 | 4 |
chest muscle | 3.01e-07 | 1 |
respiratory system muscle | 3.01e-07 | 1 |
skeletal muscle of trunk | 3.01e-07 | 1 |
respiratory system skeletal muscle | 3.01e-07 | 1 |
thoracic segment muscle | 3.01e-07 | 1 |
chest organ | 3.01e-07 | 1 |
muscle of trunk | 3.01e-07 | 1 |
diaphragm | 3.01e-07 | 1 |
future diaphragm | 3.01e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.86e-11 | 31 |
leukemia | 7.22e-09 | 39 |