FFCP PHASE1:Hg19::chr13:61507880..61507904,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:61507880..61507904,- | |||
|coexpression_cluster_id=C688 | |||
|description=CAGE_peak_at_chr13:61507880..61507904,- | |||
|id=chr13:61507880..61507904,- | |||
|ontology_enrichment_celltype=CL:0002368!9.44e-52!13;CL:0002202!8.85e-34!9;CL:0002632!8.85e-34!9;CL:0002328!2.26e-26!3;CL:0002076!3.18e-26!43;CL:0000223!6.63e-22!59;CL:0000082!7.13e-21!19;CL:0000068!1.53e-12!3;CL:0000069!1.53e-12!3;CL:0000307!1.53e-12!3;CL:0000377!1.53e-12!3;CL:0000066!7.49e-10!254;CL:0002336!2.67e-09!1;CL:0002261!2.67e-09!1;CL:0002170!2.67e-09!1;CL:0000220!9.02e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.16e-60;13!CL:0002202;1.04e-39;9!CL:0002632;1.04e-39;9!CL:0002328;1.09e-30;3!CL:0000307;2.48e-30;3!CL:0002252;4.59e-23;1!CL:0002076;4.11e-21;42!CL:0000082;3.03e-11;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,8.96e-61,13;CL:0002202,9.90e-40,9;CL:0002632,9.90e-40,9;CL:0002328,1.09e-30,3;CL:0000068,2.30e-30,3;CL:0000069,2.30e-30,3;CL:0000307,2.30e-30,3;CL:0000377,2.30e-30,3;CL:0002076,1.44e-25,42;CL:0002252,5.13e-23,1;CL:0000223,1.62e-18,58;CL:0000082,3.09e-11,19;CL:0000066,8.89e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000377;2.48e-30;3!CL:0000223;6.53e-11;58!UBERON:0009847;1.35e-08;3!UBERON:0003353;1.35e-08;3 | |||
|ontology_enrichment_disease=DOID:5662!9.70e-10!1;DOID:1324!5.11e-09!15;DOID:3905!1.09e-08!9;DOID:0050615!1.83e-08!16;DOID:3908!1.83e-07!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004815!2.26e-26!3;UBERON:0002031!2.26e-26!3;UBERON:0005178!3.04e-23!34;UBERON:0002224!3.04e-23!34;UBERON:0005181!1.55e-22!35;UBERON:0007196!1.39e-21!14;UBERON:0001558!1.39e-21!14;UBERON:0000065!6.73e-21!53;UBERON:0004802!7.13e-21!19;UBERON:0000115!7.13e-21!19;UBERON:0002185!6.06e-20!4;UBERON:0002048!6.25e-18!22;UBERON:0000117!6.25e-18!22;UBERON:0000171!6.25e-18!22;UBERON:0000170!6.25e-18!22;UBERON:0005597!6.25e-18!22;UBERON:0000118!6.25e-18!22;UBERON:0005153!5.27e-17!37;UBERON:0008947!1.13e-16!38;UBERON:0003258!1.13e-16!38;UBERON:0001004!7.56e-15!72;UBERON:0005157!8.38e-15!51;UBERON:0000915!1.16e-14!52;UBERON:0004807!6.23e-14!28;UBERON:0000072!1.51e-13!46;UBERON:0004119!2.66e-11!169;UBERON:0000925!2.66e-11!169;UBERON:0006595!2.66e-11!169;UBERON:0000485!3.66e-09!9;UBERON:0000077!1.13e-08!130;UBERON:0004921!1.13e-08!129;UBERON:0004185!1.13e-08!129;UBERON:0000063!1.20e-08!97;UBERON:0005911!1.24e-08!82;UBERON:0001041!1.35e-08!98;UBERON:0001007!4.60e-08!155;UBERON:0001555!4.60e-08!155;UBERON:0007026!4.60e-08!155;UBERON:0000464!5.74e-08!104;UBERON:0005177!1.01e-07!107;UBERON:0000466!1.47e-07!126;UBERON:0009569!3.25e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.09e-30;3!UBERON:0002031;1.09e-30;3!UBERON:0005178;3.74e-24;34!UBERON:0002224;3.74e-24;34!UBERON:0007196;4.54e-24;15!UBERON:0001558;4.54e-24;15!UBERON:0005181;3.82e-21;35!UBERON:0002185;7.24e-19;5!UBERON:0000065;1.56e-18;44!UBERON:0000072;3.93e-15;37!UBERON:0000485;8.94e-14;7!UBERON:0003126;1.27e-13;7!UBERON:0001005;1.27e-13;7!UBERON:0004802;3.03e-11;19!UBERON:0000115;3.03e-11;19!UBERON:0000915;4.53e-10;52!UBERON:0002048;8.47e-10;22!UBERON:0004807;8.47e-10;22!UBERON:0000117;8.47e-10;22!UBERON:0000171;8.47e-10;22!UBERON:0000170;8.47e-10;22!UBERON:0001043;1.35e-08;3!UBERON:0001004;5.20e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.09e-30,3;UBERON:0002031,1.09e-30,3;UBERON:0007196,4.41e-24,15;UBERON:0001558,4.41e-24,15;UBERON:0005178,2.08e-23,34;UBERON:0002224,2.08e-23,34;UBERON:0005181,9.62e-23,35;UBERON:0000065,6.12e-20,54;UBERON:0002185,7.24e-19,5;UBERON:0000915,2.42e-15,52;UBERON:0008947,8.26e-15,38;UBERON:0003258,8.26e-15,38;UBERON:0001004,1.55e-14,74;UBERON:0003126,1.23e-13,7;UBERON:0001005,1.23e-13,7;UBERON:0000072,5.17e-12,47;UBERON:0004802,3.09e-11,19;UBERON:0000115,3.09e-11,19;UBERON:0000485,6.22e-11,9;UBERON:0004119,7.41e-11,160;UBERON:0000925,7.41e-11,160;UBERON:0006595,7.41e-11,160;UBERON:0005153,5.60e-10,37;UBERON:0002048,8.59e-10,22;UBERON:0000117,8.59e-10,22;UBERON:0000171,8.59e-10,22;UBERON:0000170,8.59e-10,22;UBERON:0005597,8.59e-10,22;UBERON:0000118,8.59e-10,22;UBERON:0001041,3.62e-09,87;UBERON:0004921,5.84e-09,118;UBERON:0001043,1.40e-08,3;UBERON:0009143,1.40e-08,3;UBERON:0005157,6.28e-08,47;UBERON:0005177,6.92e-08,101;UBERON:0004807,8.01e-08,28;UBERON:0001007,2.93e-07,145;UBERON:0001555,2.93e-07,145;UBERON:0007026,2.93e-07,145;UBERON:0009569,4.22e-07,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9524759182261,4.2168828628955,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65284915360978,0.576570202095319,1.40373983744043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30933070541229,3.35151137767894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514464028312255,0,0,0,1.11231401892069,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,3.04917193418839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:61507880..61507904,- | |||
}} |
Latest revision as of 16:54, 24 July 2015
Short description: | p@chr13:61507880..61507904, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:61507880..61507904, - |
Coexpression cluster: | C688_Bronchial_Tracheal_Corneal_Prostate_Urothelial_Mallassezderived_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 8.96e-61 | 13 |
epithelial cell of tracheobronchial tree | 9.90e-40 | 9 |
epithelial cell of lower respiratory tract | 9.90e-40 | 9 |
bronchial epithelial cell | 1.09e-30 | 3 |
duct epithelial cell | 2.30e-30 | 3 |
branched duct epithelial cell | 2.30e-30 | 3 |
tracheal epithelial cell | 2.30e-30 | 3 |
tracheoblast | 2.30e-30 | 3 |
endo-epithelial cell | 1.44e-25 | 42 |
epithelial cell of esophagus | 5.13e-23 | 1 |
endodermal cell | 1.62e-18 | 58 |
epithelial cell of lung | 3.09e-11 | 19 |
epithelial cell | 8.89e-07 | 253 |