FFCP PHASE1:Hg19::chr13:99964907..99964918,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=337867 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20486 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-118bp_to_ENST00000460562_5end | |||
|cluster_id=chr13:99964907..99964918,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_11_at_UBAC2_5end | |||
|id=chr13:99964907..99964918,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.59e-72!42;CL:0000860!8.78e-67!45;CL:0002009!1.03e-53!65;CL:0002194!2.16e-49!63;CL:0000576!2.16e-49!63;CL:0000040!2.16e-49!63;CL:0000559!2.16e-49!63;CL:0000557!2.81e-48!71;CL:0000766!4.48e-44!76;CL:0000839!1.92e-43!70;CL:0000763!1.92e-37!112;CL:0000049!1.92e-37!112;CL:0000738!7.54e-37!140;CL:0002031!3.41e-32!124;CL:0002087!5.28e-32!119;CL:0002032!2.55e-29!165;CL:0000837!2.55e-29!165;CL:0000037!5.95e-29!172;CL:0000566!5.95e-29!172;CL:0000988!1.30e-26!182;CL:0000453!1.65e-13!5;CL:0000134!4.63e-12!358;CL:0002320!1.49e-11!365;CL:0000990!3.40e-10!8;CL:0000219!9.00e-10!390;CL:0000451!3.38e-08!10;CL:0000048!1.13e-07!430;CL:0000723!2.22e-07!436;CL:0000034!5.31e-07!444;CL:0002393!6.06e-07!9;CL:0002397!6.06e-07!9;CL:0001014!8.56e-07!2;CL:0001016!8.56e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.81e-107;33!CL:0002057;2.81e-107;33!CL:0000473;2.23e-74;39!CL:0000234;2.23e-74;39!CL:0000576;4.85e-54;48!CL:0000766;6.78e-32;69!CL:0000763;3.28e-15;100!CL:0002087;8.92e-15;104!CL:0001014;9.21e-14;2!CL:0001016;9.21e-14;2!CL:0000738;1.77e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.94e-96,42;CL:0002057,2.94e-96,42;CL:0000473,1.23e-83,48;CL:0000234,1.23e-83,48;CL:0002009,1.63e-74,61;CL:0000557,1.67e-67,67;CL:0002194,5.90e-66,59;CL:0000576,5.90e-66,59;CL:0000040,5.90e-66,59;CL:0000559,5.90e-66,59;CL:0000839,1.46e-58,66;CL:0000766,2.36e-53,72;CL:0000763,2.19e-43,108;CL:0000049,2.19e-43,108;CL:0002031,1.25e-38,120;CL:0002087,1.55e-34,115;CL:0000738,1.62e-33,136;CL:0002032,9.64e-30,161;CL:0000837,9.64e-30,161;CL:0000037,2.71e-28,168;CL:0000988,1.35e-26,177;CL:0001014,9.23e-14,2;CL:0001016,9.23e-14,2;CL:0000134,1.17e-11,354;CL:0002320,2.51e-11,361;CL:0000219,3.77e-10,386;CL:0000048,1.04e-08,427;CL:0000723,1.65e-08,433;CL:0000034,2.98e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;8.76e-75;42!CL:0000049;4.83e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.20e-44!80;UBERON:0001474!2.20e-42!86;UBERON:0002390!4.66e-38!102;UBERON:0003061!4.66e-38!102;UBERON:0004765!2.63e-36!101;UBERON:0001434!2.63e-36!101;UBERON:0002405!3.43e-34!115;UBERON:0002193!1.31e-33!112;UBERON:0002204!1.82e-17!167;UBERON:0003081!1.22e-13!216;UBERON:0002384!1.69e-11!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.92e-59,76;UBERON:0001474,2.09e-54,82;UBERON:0002405,2.61e-51,93;UBERON:0004765,3.48e-49,90;UBERON:0002390,1.84e-48,98;UBERON:0003061,1.84e-48,98;UBERON:0001434,8.12e-44,100;UBERON:0002193,1.50e-43,108;UBERON:0002204,2.65e-24,167;UBERON:0003081,7.59e-21,203;UBERON:0000926,1.49e-11,315;UBERON:0004120,1.49e-11,315;UBERON:0006603,1.49e-11,315;UBERON:0002384,7.17e-11,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,0,0.464448369948228,0,0,0,0,0,0,0.553995408531877,0.401088894940283,1.73608696572681,0,0,0,0,0,1.21292030593908,1.85943229524548,1.6446715520873,2.16794459626573,3.16461631554365,2.56160706529101,3.54723344832878,4.48169384957604,1.93645405075148,2.70852973188684,1.31769637679823,0.818718450173537,0.674170453335254,2.75475503133812,3.20929027076094,1.91801137739712,0.329851300186716,1.19678194572979,0.852449501065388,3.19230162491442,1.70215567407342,3.11411124497787,5.27622197039161,1.5644487552606,6.08128765174327,1.21079900526674,2.94622108790052,1.58231193720442,0.211255286311942,0,0.209658645508376,1.01095768031846,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2847046008296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,1.81284261649436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,4.72445172258151,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0.389720617678777,0.930053882193542,0.327130788511688,0,0,0.211312123358627,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39741086069687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p11@UBAC2 | |||
}} |
Latest revision as of 08:44, 18 September 2015
Short description: | p11@UBAC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_UBAC2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -118bp_to_ENST00000460562_5end |
EntrezGene: | UBAC2 |
HGNC: | 20486 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.94e-96 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.94e-96 | 42 |
defensive cell | 1.23e-83 | 48 |
phagocyte | 1.23e-83 | 48 |
macrophage dendritic cell progenitor | 1.63e-74 | 61 |
granulocyte monocyte progenitor cell | 1.67e-67 | 67 |
monopoietic cell | 5.90e-66 | 59 |
monocyte | 5.90e-66 | 59 |
monoblast | 5.90e-66 | 59 |
promonocyte | 5.90e-66 | 59 |
myeloid lineage restricted progenitor cell | 1.46e-58 | 66 |
myeloid leukocyte | 2.36e-53 | 72 |
myeloid cell | 2.19e-43 | 108 |
common myeloid progenitor | 2.19e-43 | 108 |
hematopoietic lineage restricted progenitor cell | 1.25e-38 | 120 |
nongranular leukocyte | 1.55e-34 | 115 |
leukocyte | 1.62e-33 | 136 |
hematopoietic oligopotent progenitor cell | 9.64e-30 | 161 |
hematopoietic multipotent progenitor cell | 9.64e-30 | 161 |
hematopoietic stem cell | 2.71e-28 | 168 |
hematopoietic cell | 1.35e-26 | 177 |
CD1a-positive Langerhans cell | 9.23e-14 | 2 |
immature CD1a-positive Langerhans cell | 9.23e-14 | 2 |
mesenchymal cell | 1.17e-11 | 354 |
connective tissue cell | 2.51e-11 | 361 |
motile cell | 3.77e-10 | 386 |
multi fate stem cell | 1.04e-08 | 427 |
somatic stem cell | 1.65e-08 | 433 |
stem cell | 2.98e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.92e-59 | 76 |
bone element | 2.09e-54 | 82 |
immune system | 2.61e-51 | 93 |
skeletal element | 3.48e-49 | 90 |
hematopoietic system | 1.84e-48 | 98 |
blood island | 1.84e-48 | 98 |
skeletal system | 8.12e-44 | 100 |
hemolymphoid system | 1.50e-43 | 108 |
musculoskeletal system | 2.65e-24 | 167 |
lateral plate mesoderm | 7.59e-21 | 203 |
mesoderm | 1.49e-11 | 315 |
mesoderm-derived structure | 1.49e-11 | 315 |
presumptive mesoderm | 1.49e-11 | 315 |
connective tissue | 7.17e-11 | 371 |