FFCP PHASE1:Hg19::chr14:29047245..29047254,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:29047245..29047254,+ | |||
|coexpression_cluster_id=C3420 | |||
|description=CAGE_peak_at_chr14:29047245..29047254,+ | |||
|id=chr14:29047245..29047254,+ | |||
|ontology_enrichment_celltype=CL:0002549!6.14e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002549;2.60e-10;2!CL:0000322;1.99e-07;3!CL:0002573;2.71e-07;2!CL:0000708;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002549,1.89e-10,2;CL:0000322,1.93e-07,3;CL:0002573,2.32e-07,2;CL:0000708,3.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009847;2.71e-07;3!UBERON:0003353;2.71e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;2.97e-19;1!DOID:3908;1.74e-15;5!DOID:4929;1.43e-10;2!DOID:3910;1.64e-10;2!DOID:3905;5.00e-09;9!DOID:4556;2.71e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,3.25e-19,1;DOID:3908,1.62e-15,5;DOID:4929,1.43e-10,2;DOID:3910,1.57e-10,2;DOID:3905,4.80e-09,9;DOID:4556,2.63e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0003947!6.14e-07!2;UBERON:0005629!6.14e-07!2;UBERON:0005358!6.14e-07!2;UBERON:0001886!6.14e-07!2;UBERON:0004086!6.14e-07!2;UBERON:0005282!6.14e-07!2;UBERON:0005281!6.14e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;8.94e-20;1!UBERON:0003703;8.94e-20;1!UBERON:0001174;8.94e-20;1!UBERON:0004914;8.94e-20;1!UBERON:0007195;2.97e-19;1!UBERON:0004903;1.64e-10;2!UBERON:0002173;1.64e-10;2!UBERON:0002186;1.64e-10;2!UBERON:0005629;2.60e-10;2!UBERON:0005358;2.60e-10;2!UBERON:0001886;2.60e-10;2!UBERON:0004086;2.60e-10;2!UBERON:0005282;2.60e-10;2!UBERON:0005281;2.60e-10;2!UBERON:0000058;2.57e-08;10!UBERON:0002114;1.82e-07;2!UBERON:0004821;1.99e-07;3!UBERON:0007499;1.99e-07;3!UBERON:0003215;1.99e-07;3!UBERON:0010368;1.99e-07;3!UBERON:0009911;1.99e-07;3!UBERON:0002299;1.99e-07;3!UBERON:0006524;1.99e-07;3!UBERON:0008874;1.99e-07;3!UBERON:0002169;1.99e-07;3!UBERON:0004894;1.99e-07;3!UBERON:0003210;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,8.95e-20,1;UBERON:0003703,8.95e-20,1;UBERON:0001174,8.95e-20,1;UBERON:0004914,8.95e-20,1;UBERON:0007195,4.69e-19,1;UBERON:0004903,1.57e-10,2;UBERON:0002173,1.57e-10,2;UBERON:0002186,1.57e-10,2;UBERON:0005629,1.89e-10,2;UBERON:0005358,1.89e-10,2;UBERON:0001886,1.89e-10,2;UBERON:0004086,1.89e-10,2;UBERON:0005282,1.89e-10,2;UBERON:0005281,1.89e-10,2;UBERON:0005911,7.85e-08,82;UBERON:0002114,1.82e-07,2;UBERON:0004821,1.93e-07,3;UBERON:0003215,1.93e-07,3;UBERON:0010368,1.93e-07,3;UBERON:0009911,1.93e-07,3;UBERON:0002299,1.93e-07,3;UBERON:0006524,1.93e-07,3;UBERON:0008874,1.93e-07,3;UBERON:0002169,1.93e-07,3;UBERON:0004894,1.93e-07,3;UBERON:0003210,3.35e-07,3;UBERON:0007499,3.49e-07,25;UBERON:0009856,6.30e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0,0,0,0,0,0.311211035399766,0.404132016209064,0,0.756787138224657,1.72852777344,0.234321431833797,0,0,0,0.352303495931295,0.161872944368132,0.561803226808994,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0.250237039743928,0.277064115484183,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00917975910825,0,0.36669142910475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.307007349452259,0.137836572484531,0.214840489736547,0,0.170453254832202,0,0,0,0,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,2.55722532125772,0,0,0,0,0,2.44879151050393,0,0,0,0,0,0,0,0,0.808815160325942,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0.910347586283997,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0.627865836814451,1.19472429772959,0,0,0,0.0979923974143777,0,0,0.343972064943233,0,0,0.0821154570532092,0,0,0,0.685209623233754,0,0,0,0.0801588202515337,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26720403823288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499921631848426,0.454947352624943,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0.295710299979268,0,0,0.155262956876259,0,0.265841714557995,0,0.300515217994437,0,0,0,0.322231671127465,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0.358177682162975,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0.633936370075881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0.49131575253029,4.43568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20041606606193,0,0,0,1.33477682270483,0,0,0,0.913158720509496,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0.473328002922261,1.44862788090568,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:29047245..29047254,+ | |||
}} |
Latest revision as of 20:02, 24 July 2015
Short description: | p@chr14:29047245..29047254, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:29047245..29047254, + |
Coexpression cluster: | C3420_papillotubular_alveolar_anaplastic_large_prostate_pleomorphic_schwannoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 1.89e-10 | 2 |
pneumocyte | 1.93e-07 | 3 |
Schwann cell | 2.32e-07 | 2 |
leptomeningeal cell | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 8.95e-20 | 1 |
extrahepatic bile duct | 8.95e-20 | 1 |
common bile duct | 8.95e-20 | 1 |
duodenal papilla | 8.95e-20 | 1 |
stroma of bone marrow | 4.69e-19 | 1 |
bronchoalveolar duct junction | 1.57e-10 | 2 |
alveolar duct | 1.57e-10 | 2 |
bronchiole | 1.57e-10 | 2 |
vascular plexus | 1.89e-10 | 2 |
ventricle of nervous system | 1.89e-10 | 2 |
choroid plexus | 1.89e-10 | 2 |
brain ventricle | 1.89e-10 | 2 |
ventricular system of brain | 1.89e-10 | 2 |
ventricular system of central nervous system | 1.89e-10 | 2 |
endo-epithelium | 7.85e-08 | 82 |
duodenum | 1.82e-07 | 2 |
pulmonary alveolus epithelium | 1.93e-07 | 3 |
alveolus | 1.93e-07 | 3 |
pulmonary lobule | 1.93e-07 | 3 |
lobule | 1.93e-07 | 3 |
alveolus of lung | 1.93e-07 | 3 |
alveolar system | 1.93e-07 | 3 |
pulmonary acinus | 1.93e-07 | 3 |
alveolar sac | 1.93e-07 | 3 |
alveolar wall | 1.93e-07 | 3 |
blood-cerebrospinal fluid barrier | 3.35e-07 | 3 |
epithelial sac | 3.49e-07 | 25 |
sac | 6.30e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 3.25e-19 | 1 |
non-small cell lung carcinoma | 1.62e-15 | 5 |
tubular adenocarcinoma | 1.43e-10 | 2 |
lung adenocarcinoma | 1.57e-10 | 2 |
lung carcinoma | 4.80e-09 | 9 |
lung large cell carcinoma | 2.63e-07 | 3 |