FFCP PHASE1:Hg19::chr14:94426721..94426726,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:94426721..94426726,+ | |||
|coexpression_cluster_id=C3202 | |||
|description=CAGE_peak_at_chr14:94426721..94426726,+ | |||
|id=chr14:94426721..94426726,+ | |||
|ontology_enrichment_celltype=CL:0002368!9.28e-16!13;CL:0002076!5.92e-12!43;CL:0002202!3.48e-11!9;CL:0002632!3.48e-11!9;CL:0000223!5.94e-10!59;CL:0000068!1.73e-09!3;CL:0000069!1.73e-09!3;CL:0000307!1.73e-09!3;CL:0000377!1.73e-09!3;CL:0002328!1.88e-09!3;CL:0002327!4.64e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002368;2.74e-42;13!CL:0002202;1.98e-39;9!CL:0002632;1.98e-39;9!CL:0000307;1.26e-30;3!CL:0002328;5.61e-30;3!CL:0000946;4.10e-23;1!CL:0000786;4.10e-23;1!CL:0002076;3.33e-09;42!CL:0002327;9.10e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,2.99e-42,13;CL:0002202,2.67e-39,9;CL:0002632,2.67e-39,9;CL:0000068,1.26e-30,3;CL:0000069,1.26e-30,3;CL:0000307,1.26e-30,3;CL:0000377,1.26e-30,3;CL:0002328,8.74e-30,3;CL:0000946,3.28e-23,1;CL:0000786,3.28e-23,1;CL:0000980,3.28e-23,1;CL:0002076,2.70e-13,42;CL:0000785,2.59e-12,2;CL:0000955,2.59e-12,2;CL:0000818,2.59e-12,2;CL:0000954,2.59e-12,2;CL:0000816,2.59e-12,2;CL:0000223,1.12e-09,58;CL:0000817,1.21e-08,3;CL:0002327,9.11e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000377;1.26e-30;3!CL:0000954;2.90e-12;2!CL:0000223;1.94e-07;58 | |||
|ontology_enrichment_disease=DOID:0060058!1.52e-08!10;DOID:1749!2.32e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004815!1.88e-09!3;UBERON:0002031!1.88e-09!3;UBERON:0003729!1.56e-08!5;UBERON:0002185!3.72e-07!4;UBERON:0001911!4.64e-07!4;UBERON:0005333!4.64e-07!4;UBERON:0008425!4.64e-07!4;UBERON:0005311!4.64e-07!4;UBERON:0007196!7.25e-07!14;UBERON:0001558!7.25e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;5.61e-30;3!UBERON:0002031;5.61e-30;3!UBERON:0007196;6.67e-24;15!UBERON:0001558;6.67e-24;15!UBERON:0002185;1.93e-18;5!UBERON:0003126;9.53e-14;7!UBERON:0001005;9.53e-14;7!UBERON:0000485;1.80e-13;7!UBERON:0000065;4.12e-12;44!UBERON:0005178;3.31e-11;34!UBERON:0002224;3.31e-11;34!UBERON:0005181;9.94e-10;35!UBERON:0000072;2.13e-09;37!UBERON:0001911;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,8.74e-30,3;UBERON:0002031,8.74e-30,3;UBERON:0007196,7.97e-24,15;UBERON:0001558,7.97e-24,15;UBERON:0002185,2.52e-18,5;UBERON:0003126,9.53e-14,7;UBERON:0001005,9.53e-14,7;UBERON:0005178,9.05e-11,34;UBERON:0002224,9.05e-11,34;UBERON:0000485,1.24e-10,9;UBERON:0005181,1.79e-10,35;UBERON:0000065,2.21e-10,54;UBERON:0008947,1.12e-09,38;UBERON:0003258,1.12e-09,38;UBERON:0000072,6.88e-08,47;UBERON:0001004,1.31e-07,74;UBERON:0000915,3.68e-07,52;UBERON:0001911,9.11e-07,4;UBERON:0005333,9.11e-07,4;UBERON:0008425,9.11e-07,4;UBERON:0005311,9.11e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0.919421224478927,1.204823675113,1.10926203050036,0.154934401160603,0.995184627411951,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0.639337125799041,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0.895585227028483,0.581267877027924,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.192190067365106,1.91419068741876,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,3.35151137767894,4.3556393944529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0.280797178113459,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568967241427498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0.632994193584081,0.326465616318295,0,0,0,0,0,0.296521128680622,0.123563938946503,0.208843899010911,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.435296032902013,0,0,0,0,0,0,0,0,0.548167698587004,0.397429223405979,0,0,0,0,0,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,3.15464825135177,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545545977607678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0.106691729694141,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0.366857197043358,0.693153996902029,0,0,0,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0,0,0,1.72850981333669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,3.88184358887261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560659312903067,0,0,0,0,0,0,0,0.569822880276821,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:94426721..94426726,+ | |||
}} |
Latest revision as of 23:52, 24 July 2015
Short description: | p@chr14:94426721..94426726, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:94426721..94426726, + |
Coexpression cluster: | C3202_Tracheal_Small_squamous_Bronchial_hairy_Mammary_Keratinocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 2.99e-42 | 13 |
epithelial cell of tracheobronchial tree | 2.67e-39 | 9 |
epithelial cell of lower respiratory tract | 2.67e-39 | 9 |
duct epithelial cell | 1.26e-30 | 3 |
branched duct epithelial cell | 1.26e-30 | 3 |
tracheal epithelial cell | 1.26e-30 | 3 |
tracheoblast | 1.26e-30 | 3 |
bronchial epithelial cell | 8.74e-30 | 3 |
antibody secreting cell | 3.28e-23 | 1 |
plasma cell | 3.28e-23 | 1 |
plasmablast | 3.28e-23 | 1 |
endo-epithelial cell | 2.70e-13 | 42 |
mature B cell | 2.59e-12 | 2 |
pre-B-II cell | 2.59e-12 | 2 |
transitional stage B cell | 2.59e-12 | 2 |
small pre-B-II cell | 2.59e-12 | 2 |
immature B cell | 2.59e-12 | 2 |
endodermal cell | 1.12e-09 | 58 |
precursor B cell | 1.21e-08 | 3 |
mammary gland epithelial cell | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 8.74e-30 | 3 |
epithelium of bronchus | 8.74e-30 | 3 |
tracheobronchial tree | 7.97e-24 | 15 |
lower respiratory tract | 7.97e-24 | 15 |
bronchus | 2.52e-18 | 5 |
trachea | 9.53e-14 | 7 |
respiratory airway | 9.53e-14 | 7 |
thoracic cavity element | 9.05e-11 | 34 |
thoracic cavity | 9.05e-11 | 34 |
simple columnar epithelium | 1.24e-10 | 9 |
thoracic segment organ | 1.79e-10 | 35 |
respiratory tract | 2.21e-10 | 54 |
respiratory primordium | 1.12e-09 | 38 |
endoderm of foregut | 1.12e-09 | 38 |
segment of respiratory tract | 6.88e-08 | 47 |
respiratory system | 1.31e-07 | 74 |
thoracic segment of trunk | 3.68e-07 | 52 |
mammary gland | 9.11e-07 | 4 |
mammary bud | 9.11e-07 | 4 |
mammary ridge | 9.11e-07 | 4 |
mammary placode | 9.11e-07 | 4 |