FFCP PHASE1:Hg19::chr17:27044810..27044873,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83871 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16519 | |||
|TSSclassifier=strong | |||
|UniProt=A8MYQ9 | |||
|association_with_transcript=0bp_to_ENST00000395242_5end | |||
|cluster_id=chr17:27044810..27044873,- | |||
|coexpression_cluster_id=C3622 | |||
|description=CAGE_peak_2_at_RAB34_5end | |||
|id=chr17:27044810..27044873,- | |||
|ontology_enrichment_celltype=CL:0000055!3.33e-41!180;CL:0002321!6.12e-25!248;CL:0000220!8.32e-25!246;CL:0000183!4.46e-21!59;CL:0000222!1.02e-20!119;CL:0000680!7.31e-20!57;CL:0000056!7.31e-20!57;CL:0000355!7.31e-20!57;CL:0000187!3.42e-19!54;CL:0000393!1.11e-18!60;CL:0000211!1.11e-18!60;CL:0000057!3.92e-17!75;CL:0000548!7.71e-17!679;CL:0000004!7.71e-17!679;CL:0000255!7.71e-17!679;CL:0000192!1.01e-16!42;CL:0000514!1.01e-16!42;CL:0000012!4.48e-16!682;CL:0000359!1.85e-14!32;CL:0000144!1.03e-12!625;CL:0002371!7.94e-10!591;CL:0000066!1.99e-09!254;CL:0002494!3.37e-07!16;CL:0000499!7.61e-07!27;CL:0000003!7.68e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.13e-13;32!CL:0000192;5.98e-12;43!CL:0000187;1.02e-10;55!CL:0000393;1.12e-09;61!CL:0000211;1.12e-09;61!CL:0000057;9.52e-08;73!CL:0000134;2.84e-07;55!CL:0002494;2.89e-07;16!CL:0000499;4.63e-07;28!CL:0002320;4.65e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.03e-25,250;CL:0000222,1.39e-20,121;CL:0000680,7.54e-20,58;CL:0000056,7.54e-20,58;CL:0000355,7.54e-20,58;CL:0000187,3.64e-19,55;CL:0000393,1.11e-18,61;CL:0000211,1.11e-18,61;CL:0000057,1.53e-17,76;CL:0000192,1.24e-16,43;CL:0000514,1.24e-16,43;CL:0000359,1.28e-14,32;CL:0000066,1.60e-09,253;CL:0002494,2.86e-07,16;CL:0000499,4.17e-07,28;CL:0000221,8.19e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000514;5.98e-12;43!CL:0000355;1.75e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.05e-22!83;UBERON:0002329!1.05e-22!83;UBERON:0003077!1.05e-22!83;UBERON:0003059!1.05e-22!83;UBERON:0007282!1.05e-22!83;UBERON:0009618!1.05e-22!83;UBERON:0007285!1.05e-22!83;UBERON:0000486!1.64e-22!82;UBERON:0004290!5.33e-21!70;UBERON:0005256!3.02e-20!143;UBERON:0002100!1.11e-18!216;UBERON:0003104!2.19e-18!238;UBERON:0009142!2.19e-18!238;UBERON:0001134!5.45e-18!61;UBERON:0002036!5.45e-18!61;UBERON:0003082!5.45e-18!61;UBERON:0000481!5.39e-17!347;UBERON:0002385!5.47e-17!63;UBERON:0001015!5.47e-17!63;UBERON:0000383!5.47e-17!63;UBERON:0000475!3.90e-15!365;UBERON:0004872!6.31e-13!84;UBERON:0000119!1.48e-12!312;UBERON:0002049!1.62e-12!79;UBERON:0007798!1.62e-12!79;UBERON:0003914!2.25e-12!118;UBERON:0000483!5.05e-12!309;UBERON:0001637!1.20e-11!42;UBERON:0003509!1.20e-11!42;UBERON:0004572!1.20e-11!42;UBERON:0000490!3.41e-11!138;UBERON:0000468!1.74e-10!659;UBERON:0001981!3.54e-10!60;UBERON:0007500!3.54e-10!60;UBERON:0004537!3.54e-10!60;UBERON:0006965!3.54e-10!60;UBERON:0004573!3.59e-09!33;UBERON:0004571!3.59e-09!33;UBERON:0003102!6.54e-09!95;UBERON:0000055!7.07e-09!69;UBERON:0000922!2.19e-08!612;UBERON:0004535!3.86e-08!110;UBERON:0002050!4.46e-08!605;UBERON:0005423!4.46e-08!605;UBERON:0000923!5.51e-08!604;UBERON:0005291!5.51e-08!604;UBERON:0006598!5.51e-08!604;UBERON:0002532!5.51e-08!604;UBERON:0000477!8.17e-08!286;UBERON:0000467!8.52e-08!625;UBERON:0001009!1.18e-07!113;UBERON:0000480!1.43e-07!626;UBERON:0000926!2.66e-07!448;UBERON:0004120!2.66e-07!448;UBERON:0006603!2.66e-07!448;UBERON:0003103!2.69e-07!69;UBERON:0001048!6.59e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.61e-08;33!UBERON:0004571;5.61e-08;33!UBERON:0001637;7.59e-08;42!UBERON:0003509;7.59e-08;42!UBERON:0004572;7.59e-08;42!UBERON:0003914;4.03e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,7.39e-23,78;UBERON:0000486,1.17e-22,83;UBERON:0002329,4.16e-21,71;UBERON:0003059,4.16e-21,71;UBERON:0007282,4.16e-21,71;UBERON:0004290,4.16e-21,71;UBERON:0009618,4.16e-21,71;UBERON:0007524,4.88e-21,73;UBERON:0003077,1.31e-20,72;UBERON:0007285,1.31e-20,72;UBERON:0003104,1.69e-19,160;UBERON:0009142,1.69e-19,160;UBERON:0001134,4.61e-18,62;UBERON:0002036,4.61e-18,62;UBERON:0003082,4.61e-18,62;UBERON:0002100,3.10e-17,199;UBERON:0002385,4.57e-17,64;UBERON:0001015,4.57e-17,64;UBERON:0000383,4.57e-17,64;UBERON:0005256,5.59e-16,122;UBERON:0000490,8.69e-14,148;UBERON:0004872,8.49e-13,83;UBERON:0003914,2.11e-12,117;UBERON:0002049,2.46e-12,78;UBERON:0007798,2.46e-12,78;UBERON:0000119,6.50e-12,309;UBERON:0001637,1.25e-11,42;UBERON:0003509,1.25e-11,42;UBERON:0004572,1.25e-11,42;UBERON:0000483,2.17e-11,306;UBERON:0007500,5.69e-10,59;UBERON:0001981,5.69e-10,59;UBERON:0004537,5.69e-10,59;UBERON:0006965,5.69e-10,59;UBERON:0004573,4.01e-09,33;UBERON:0004571,4.01e-09,33;UBERON:0003102,5.04e-09,99;UBERON:0000055,1.01e-08,68;UBERON:0004535,2.96e-08,109;UBERON:0001009,9.30e-08,112;UBERON:0001048,2.90e-07,160;UBERON:0003103,3.33e-07,68 | |||
|phase1_expression=27.7967920283952,24.1933591996811,19.0288445529561,33.024188456533,22.3480547213644,49.723295873721,22.796989035148,24.0053551902196,7.57438321779532,27.7679348246705,80.9449354848016,16.1646615376327,27.1679987575307,25.1245696508895,32.1455454456078,24.8760304187157,24.7104756489831,24.8305430731707,23.9087071407348,18.9606429438253,50.796172119819,31.6589268692869,8.30084362680065,16.2880565836732,16.8227137057036,0.0764134057479513,0,0,0,0,1.39334510984468,45.9710612239464,66.5665080499933,36.605647006512,0,0,1.76160263600908,0,0.401088894940283,0,0.447830948479849,0,1.28787783817093,0.290796477559129,0,0,0,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0.376484679085209,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,24.3806866313962,41.5834533016254,32.3492281464132,35.4210369336875,57.6538597231273,51.7102072690141,11.1340032587154,32.6045363102766,31.4800941156346,38.3591857610236,39.6134883475998,3.01251873644739,35.3366429643766,22.6178510098502,0.97364218096405,1.74129737299267,4.25465473660369,0.238490624305342,0,0.371457501329565,0.39752481473341,9.46258054616737,2.42998351125316,3.39184765154406,2.51699661725944,15.9568464325239,13.7936677914295,3.35941786920128,2.13459757612026,2.00832367658802,7.65375702507379,12.1643536914962,8.05404789908959,1.47065232138347,34.0259618110339,6.1616812516015,8.08305741454211,6.64407734851601,19.9311628705648,18.0360475317944,13.923332538711,0,0,20.9325145028416,32.3031768601957,33.9369771261074,10.7251436458707,19.2180535901705,35.1121698376373,49.9003064126653,61.9144175232289,73.2602618798965,18.672662123986,27.4809771022164,20.1058140829554,30.7255578119211,29.9611480729599,36.0855005024047,34.9619286049959,22.818872861778,48.2719238182317,19.0243887802899,18.6153886023351,19.6631129383148,13.8824836453327,29.9715734240714,16.1188218634194,33.2640800038975,53.6569236534468,24.5743567723267,69.7059597561751,21.5470225861205,21.01991133849,12.4678851967882,31.1674110825395,52.1029252858333,44.0197512596329,29.2655032552854,10.404598869954,31.1793787675108,32.2136489762534,24.0072876867522,29.6791284206704,16.2313540228746,42.0624095309393,10.2953562667172,19.1950900167561,14.3887251319145,35.2551111800006,27.3181836023792,11.3603069605317,19.9489154490728,33.5729972774766,14.6878248404106,12.2735754265876,12.0457930063382,15.2467132661994,12.8553875271841,12.0841700584299,11.8173602717522,15.1392510525377,10.2193660541232,53.1928409921374,54.0322388082024,53.8726193274674,29.7195473940467,32.4845766751314,27.6837912093235,22.5903484704656,21.4499816596299,27.7940811285633,29.4137249524748,26.8115799595539,29.2583938707557,22.9579114196655,27.3170481431937,5.90524363699719,50.4870385692405,37.8648090424888,76.4445299204818,0,0,1.77236972004421,0,0,17.4999166504496,15.6942908134335,34.8445435098621,11.0581869652794,17.6843930252792,18.2452650973782,54.0766088345381,34.6395220860656,14.8390918368098,19.2550258546748,7.36268883581476,6.01881166349594,3.61482889245737,0,0,0,1.8720341211139,1.33768046059855,11.2480600784132,10.2469098201304,9.49893151523989,12.5381931783988,15.40359874124,28.7537009373908,0.492663237895943,0.264145302039678,1.24396869324463,1.72943944100354,0.50496973370552,6.79427468926209,9.54971063895694,18.7547915536075,27.3715913636328,9.35730183600244,16.2185251235715,5.71652865261156,24.2203142185979,30.5172048183296,19.3613074567308,38.39369958006,110.873498214084,32.121504597128,31.6466358735996,29.1220823351825,41.1531798819427,53.9026701688457,54.0837023402682,20.1598971057988,38.5261339827925,32.10637313445,21.1728519790928,23.1004766682655,28.5102674256034,24.1151501647669,26.1460037580088,32.0913301694403,0,0,0,28.0361080925152,27.5668646001873,8.5582143024431,19.8350390134584,44.7938383159836,19.8757669196284,0,0,0,0,6.35236560556159,1.30139853857622,6.95959931499926,2.51274398001523,1.27587750330633,0,0,0,25.2744472941428,42.0143237690129,29.0253575358717,42.6340266138155,34.9720818042437,45.891402774875,48.613687221976,44.5400227597024,88.6889265818341,57.9449199238028,39.1893103135908,60.4730872816786,24.2405284365951,33.4819979261286,52.1578004192501,0.413536052245775,0.215714200818617,0,19.4001645725606,58.252403828674,43.8465925328036,28.2842900913406,10.4354141835882,31.7145906709373,27.8061953884871,26.0970697024019,27.1843126732697,75.6932138869454,21.8977765199771,48.2967892851706,18.3964829470932,32.7130290385681,28.3553323442301,0,32.4820481891321,6.62983120338454,22.0443740476045,38.0570541134039,39.2062000728678,27.0719767744447,19.5618956245213,72.1601787642707,40.918982902913,17.4160187673245,6.8240030442538,10.0355286113144,15.3300300432519,40.0990856994752,41.4548049442095,68.2298092442601,28.2912663079993,30.7498123303628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| |||
|short_description=p2@RAB34 | |||
}} |
Latest revision as of 07:06, 19 September 2015
Short description: | p2@RAB34 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAB34_5end |
Coexpression cluster: | C3622_Mesenchymal_Alveolar_Renal_Smooth_Osteoblast_Keratocytes_Hair |
Association with transcript: | 0bp_to_ENST00000395242_5end |
EntrezGene: | RAB34 |
HGNC: | 16519 |
UniProt: | A8MYQ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.03e-25 | 250 |
mesodermal cell | 1.39e-20 | 121 |
muscle precursor cell | 7.54e-20 | 58 |
myoblast | 7.54e-20 | 58 |
multi-potent skeletal muscle stem cell | 7.54e-20 | 58 |
muscle cell | 3.64e-19 | 55 |
electrically responsive cell | 1.11e-18 | 61 |
electrically active cell | 1.11e-18 | 61 |
fibroblast | 1.53e-17 | 76 |
smooth muscle cell | 1.24e-16 | 43 |
smooth muscle myoblast | 1.24e-16 | 43 |
vascular associated smooth muscle cell | 1.28e-14 | 32 |
epithelial cell | 1.60e-09 | 253 |
cardiocyte | 2.86e-07 | 16 |
stromal cell | 4.17e-07 | 28 |
ectodermal cell | 8.19e-07 | 72 |