FFCP PHASE1:Hg19::chr17:636110..636134,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79850 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29646 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-133bp_to_uc002frr.2_5end | |||
|cluster_id=chr17:636110..636134,+ | |||
|description=CAGE_peak_3_at_FAM57A_5end | |||
|id=chr17:636110..636134,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.44e-25!180;CL:0000222!5.63e-19!119;CL:0002321!1.63e-17!248;CL:0000220!6.46e-17!246;CL:0000393!1.22e-13!60;CL:0000211!1.22e-13!60;CL:0000183!1.10e-12!59;CL:0000680!3.50e-12!57;CL:0000056!3.50e-12!57;CL:0000355!3.50e-12!57;CL:0000187!4.10e-12!54;CL:0000192!3.24e-10!42;CL:0000514!3.24e-10!42;CL:0000012!5.12e-10!682;CL:0000144!5.22e-10!625;CL:0000548!9.34e-10!679;CL:0000004!9.34e-10!679;CL:0000255!9.34e-10!679;CL:0002371!5.56e-09!591;CL:0002078!2.65e-08!44;CL:0002319!6.84e-08!25;CL:0000213!9.07e-08!57;CL:0000215!9.07e-08!57;CL:0000359!9.82e-08!32;CL:0000115!1.46e-07!35;CL:0002139!2.45e-07!24;CL:0000057!2.90e-07!75;CL:0000071!7.70e-07!18;CL:0002546!7.70e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000192;8.97e-11;43!CL:0000359;7.03e-10;32!CL:0000071;1.03e-09;18!CL:0000187;1.46e-09;55!CL:0002139;2.96e-09;24!CL:0000115;2.79e-08;36!CL:0002543;6.85e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.78e-19,121;CL:0000192,5.51e-15,43;CL:0000514,5.51e-15,43;CL:0000187,7.55e-15,55;CL:0000680,1.23e-13,58;CL:0000056,1.23e-13,58;CL:0000355,1.23e-13,58;CL:0000393,1.26e-13,61;CL:0000211,1.26e-13,61;CL:0002321,2.29e-11,250;CL:0000359,1.26e-10,32;CL:0000071,4.34e-10,18;CL:0002546,4.34e-10,18;CL:0000115,1.21e-09,36;CL:0002139,2.11e-09,24;CL:0002543,3.51e-08,6;CL:0002078,1.22e-07,45;CL:0000213,3.18e-07,58;CL:0000215,3.18e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;8.97e-11;43!CL:0002546;1.03e-09;18!CL:0000355;2.27e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.32e-14!143;UBERON:0004290!1.68e-13!70;UBERON:0000486!1.93e-13!82;UBERON:0000914!8.63e-13!83;UBERON:0002329!8.63e-13!83;UBERON:0003077!8.63e-13!83;UBERON:0003059!8.63e-13!83;UBERON:0007282!8.63e-13!83;UBERON:0009618!8.63e-13!83;UBERON:0007285!8.63e-13!83;UBERON:0000490!1.17e-12!138;UBERON:0001134!5.31e-12!61;UBERON:0002036!5.31e-12!61;UBERON:0003082!5.31e-12!61;UBERON:0002049!5.86e-12!79;UBERON:0007798!5.86e-12!79;UBERON:0002385!2.68e-11!63;UBERON:0001015!2.68e-11!63;UBERON:0000383!2.68e-11!63;UBERON:0003914!2.98e-11!118;UBERON:0000055!3.83e-10!69;UBERON:0001981!6.10e-10!60;UBERON:0007500!6.10e-10!60;UBERON:0004537!6.10e-10!60;UBERON:0006965!6.10e-10!60;UBERON:0002100!1.90e-09!216;UBERON:0000119!5.68e-09!312;UBERON:0001637!7.74e-09!42;UBERON:0003509!7.74e-09!42;UBERON:0004572!7.74e-09!42;UBERON:0000475!1.06e-08!365;UBERON:0000483!1.27e-08!309;UBERON:0004535!1.83e-08!110;UBERON:0001009!8.87e-08!113;UBERON:0004872!9.05e-08!84;UBERON:0003104!2.21e-07!238;UBERON:0009142!2.21e-07!238;UBERON:0000481!6.90e-07!347;UBERON:0001986!7.70e-07!18;UBERON:0004638!7.70e-07!18;UBERON:0004852!7.70e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;5.02e-10;56!UBERON:0001981;5.02e-10;56!UBERON:0004537;5.02e-10;56!UBERON:0004638;1.03e-09;18!UBERON:0001986;1.03e-09;18!UBERON:0004852;1.03e-09;18!UBERON:0000055;6.68e-09;65!UBERON:0001638;1.07e-08;9!UBERON:0003920;1.07e-08;9!UBERON:0004582;1.07e-08;9!UBERON:0001637;5.92e-08;42!UBERON:0003509;5.92e-08;42!UBERON:0004572;5.92e-08;42!UBERON:0000487;2.14e-07;22!UBERON:0004573;2.42e-07;33!UBERON:0004571;2.42e-07;33!UBERON:0002049;3.67e-07;75!UBERON:0007798;3.67e-07;75!UBERON:0010260;5.49e-07;9!UBERON:0002066;7.65e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.96e-17,78;UBERON:0000490,1.34e-16,148;UBERON:0002329,5.61e-16,71;UBERON:0003059,5.61e-16,71;UBERON:0007282,5.61e-16,71;UBERON:0004290,5.61e-16,71;UBERON:0009618,5.61e-16,71;UBERON:0003077,1.31e-15,72;UBERON:0007285,1.31e-15,72;UBERON:0007524,2.97e-15,73;UBERON:0000055,3.87e-15,68;UBERON:0007500,5.74e-15,59;UBERON:0001981,5.74e-15,59;UBERON:0004537,5.74e-15,59;UBERON:0006965,5.74e-15,59;UBERON:0002049,8.43e-15,78;UBERON:0007798,8.43e-15,78;UBERON:0000486,4.09e-14,83;UBERON:0003914,6.20e-14,117;UBERON:0003104,2.29e-13,160;UBERON:0009142,2.29e-13,160;UBERON:0001134,3.21e-13,62;UBERON:0002036,3.21e-13,62;UBERON:0003082,3.21e-13,62;UBERON:0005256,1.07e-12,122;UBERON:0002385,1.55e-12,64;UBERON:0001015,1.55e-12,64;UBERON:0000383,1.55e-12,64;UBERON:0004872,3.42e-12,83;UBERON:0001637,3.64e-12,42;UBERON:0003509,3.64e-12,42;UBERON:0004572,3.64e-12,42;UBERON:0004535,6.51e-12,109;UBERON:0001009,2.74e-11,112;UBERON:0004638,4.34e-10,18;UBERON:0001986,4.34e-10,18;UBERON:0004852,4.34e-10,18;UBERON:0001638,2.47e-09,9;UBERON:0003920,2.47e-09,9;UBERON:0004582,2.47e-09,9;UBERON:0000483,4.56e-09,306;UBERON:0000119,8.45e-09,309;UBERON:0004573,2.39e-08,33;UBERON:0004571,2.39e-08,33;UBERON:0000487,1.10e-07,22;UBERON:0002100,2.42e-07,199;UBERON:0002066,3.74e-07,5;UBERON:0010260,5.02e-07,9 | |||
|phase1_expression=1.09007027562334,0.214100523890983,0.704772020479856,2.00146596706261,0,1.74467704820074,2.53299878168311,0.631719873426831,0.522371256399677,0.491467873003018,0.697801167972428,0.873765488520689,0.791300934685361,0.618831764800233,1.32558950291166,2.01697543935533,0,0,1.46379839637152,1.47745269692145,2.24400760368678,0.940364164434263,0.85870796139317,0.410623275218653,1.38096903554283,0.305653622991805,0.492603536699674,0.393553906568396,0,0,0,0,0.30120591877825,0,0,0.284338464974843,0.587200878669695,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,1.05353633910031,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0.144824403882799,0,0,0.767175371061182,0,0,1.15877215168659,0,2.43317435151318,0.850813354476611,0.221729397462564,0.614843499851882,0,0.364295288292542,0,0,0,0,0,0,0,0.79504962946682,1.72046919021225,2.08284300964557,2.82653970962005,2.09749718104953,2.75118041940067,0.626984899610432,0.516833518338658,0,0.66944122552934,0.805658634218294,0,0.732186172644509,2.57364156242108,0,1.07159673940896,1.79623498100936,1.12611480483322,1.53316637465883,1.89853131913626,1.28241220751285,0,0,0.872188104285069,0.496971951695318,0.379891534993739,0.132409180813219,0,0.354668382198357,0,2.1349799145941,0.24666754841716,0.622422070799533,1.0776853765575,1.47115712802113,0.605429710579726,1.15235184896,0.70296429550139,0.624320153660641,1.71141546463335,2.24173020827702,1.17434498643765,1.61872944368132,2.66856532734272,0.61246251376468,1.71968044236475,0.413303124703062,0,0.494533858557114,0,2.15585442544872,0.673344455816265,1.00094815897571,0,0.438977620880838,0.30648779579902,0.150238058906597,1.58805056424029,0.358779271377724,0.427114777637135,0.635795703478686,0,0.618315175430633,0,0.18611685633159,1.0126579934476,0.779496041289589,0.504867548488229,0.736399189138395,0.969876340912871,0,0.604512589365842,1.01736355386293,0.193260853163297,0.272746120590835,0.286804595389004,0.975789649036763,1.06023814657188,1.16193942869518,0.621966330092223,0.504641701751257,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0.236613600079688,0,0.482022059766964,0.441175890929576,0.217879444092406,0.237270619111097,0.269662616320329,0.392442930250692,0.38474715694639,0.738155454624648,0,0.8231480226628,1.47008711385542,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0.301586917234893,0.185176890317059,0.325808305310325,3.11980435583874,4.3299402607582,0.811512834825538,0.939269553886573,1.01056513432752,2.31492756288305,0.761016608938393,0.790204397959275,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0.492663237895943,1.40877494421162,0.207328115540772,0.432359860250884,0.25248486685276,0.063497894292169,0.381988425558278,0,0,0.308482478109971,0.300343057843917,0.285826432630578,0.672786506072164,0.43596006883328,0.7333828582095,0.517086863031111,0,0.845302752556,1.32969058292435,0,2.05765899409714,0,0.799266537048298,0.714889968290738,2.71310802695722,3.29296134712308,1.62868092146868,1.06617584622764,2.37585561880029,0.602878754119172,2.61460037580088,0.299918973546171,0,0,0,0.239624855491583,0,2.85273810081437,0.289562613335158,0.821905290201534,0.358121926479791,0,0,0,0,0.76228387266739,2.60279707715243,0.773288812777695,0.502548796003046,1.27587750330633,0,0,0,0.12269149171914,2.00068208423871,1.08506009479894,1.45579603071565,0.178428988797162,0.630809660135739,0.937131319941706,1.20378439891088,2.27407504055985,0,2.65690239414175,1.47495334833363,0.521301686808497,0.783204629850962,0.686286847621712,0,0,0.106727557803444,0,0,0.907170879989041,0.992431231275107,0.153461973288062,0.561320188866147,0.384417447767103,0,0.64341568457443,0,1.3878872442239,1.06537035187876,0.492762936082855,1.03850885836724,0.929683027679674,0.241718899183244,0.40101294060657,0.0920809889358963,0.229628896329213,1.0925470080403,1.44236856455367,0.902399225814824,0.539107359730903,1.56869953835371,1.46139224653261,0.527758144464379,3.4120015221269,2.89159298970077,0.863663664408557,3.08454505380579,0.812839312631559,0,0,0.831076008928724,1.34324852833307,0,0.261435451024901,0.512900250232778,1.96808787419823,0.325378394664303,0.103041011647722,0.457847324091717,0.330037999682352,1.14853107599234,0,0,0.773365746336976,1.07834031980251,0.921022048356777,1.51620229732984,0.966782203814463,1.88521702088497,0.681813019328807,0.534192213880424,0,0.192190067365106,0.127612712494584,0.10115778085555,1.39453664789186,0,0.6970372701606,1.54016790088044,1.59691809095107,3.47973196830029,0.37064843820784,0.572499546967965,1.116475108079,0.949138274156178,0,2.04718233049067,1.28381696410176,1.27281299170375,2.35484592059769,0.899362287916574,1.37268514868027,1.17812402345686,1.01091240786658,0,0.842516912477962,0.975267478179181,0.487426979262569,2.11300293513511,0.136499911407986,1.272648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| |||
|short_description=p3@FAM57A | |||
}} |
Latest revision as of 20:58, 16 September 2015
Short description: | p3@FAM57A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FAM57A_5end |
Coexpression cluster: | NA |
Association with transcript: | -133bp_to_uc002frr.2_5end |
EntrezGene: | FAM57A |
HGNC: | 29646 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.78e-19 | 121 |
smooth muscle cell | 5.51e-15 | 43 |
smooth muscle myoblast | 5.51e-15 | 43 |
muscle cell | 7.55e-15 | 55 |
muscle precursor cell | 1.23e-13 | 58 |
myoblast | 1.23e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.23e-13 | 58 |
electrically responsive cell | 1.26e-13 | 61 |
electrically active cell | 1.26e-13 | 61 |
embryonic cell | 2.29e-11 | 250 |
vascular associated smooth muscle cell | 1.26e-10 | 32 |
blood vessel endothelial cell | 4.34e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.34e-10 | 18 |
endothelial cell | 1.21e-09 | 36 |
endothelial cell of vascular tree | 2.11e-09 | 24 |
vein endothelial cell | 3.51e-08 | 6 |
meso-epithelial cell | 1.22e-07 | 45 |
lining cell | 3.18e-07 | 58 |
barrier cell | 3.18e-07 | 58 |