FFCP PHASE1:Hg19::chr19:14887645..14887660,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=30817 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3337 | |||
|TSSclassifier=strong | |||
|UniProt=B4DWB8,E7ESD7 | |||
|association_with_transcript=0bp_to_ENST00000392962,ENST00000392965_5end | |||
|cluster_id=chr19:14887645..14887660,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_EMR2_5end | |||
|id=chr19:14887645..14887660,- | |||
|ontology_enrichment_celltype=CL:0000766!2.53e-36!76;CL:0000763!6.16e-32!112;CL:0000049!6.16e-32!112;CL:0000557!2.19e-30!71;CL:0000839!2.40e-30!70;CL:0000860!2.70e-28!45;CL:0002194!2.76e-28!63;CL:0000576!2.76e-28!63;CL:0000040!2.76e-28!63;CL:0000559!2.76e-28!63;CL:0002009!3.58e-27!65;CL:0002057!7.50e-27!42;CL:0000037!2.12e-20!172;CL:0000566!2.12e-20!172;CL:0000988!3.38e-20!182;CL:0002032!5.93e-19!165;CL:0000837!5.93e-19!165;CL:0000738!9.36e-18!140;CL:0002031!1.19e-14!124;CL:0002087!8.71e-14!119;CL:0000134!2.44e-11!358;CL:0000048!1.40e-10!430;CL:0000723!6.34e-10!436;CL:0000034!8.84e-10!444;CL:0002320!1.03e-09!365;CL:0000081!2.22e-07!11;CL:0000219!2.48e-07!390;CL:0000094!9.36e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.38e-20;33!CL:0002057;3.38e-20;33!CL:0000473;5.97e-19;39!CL:0000234;5.97e-19;39!CL:0000766;3.61e-16;69!CL:0000576;1.58e-15;48!CL:0000763;1.60e-10;100!CL:0000081;1.59e-07;11!CL:0000094;7.20e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.48e-36,72;CL:0000763,3.72e-32,108;CL:0000049,3.72e-32,108;CL:0000557,1.92e-30,67;CL:0000839,2.07e-30,66;CL:0000473,8.93e-30,48;CL:0000234,8.93e-30,48;CL:0002194,2.40e-28,59;CL:0000576,2.40e-28,59;CL:0000040,2.40e-28,59;CL:0000559,2.40e-28,59;CL:0000860,2.17e-27,42;CL:0002057,2.17e-27,42;CL:0002009,3.65e-27,61;CL:0000988,1.38e-20,177;CL:0000037,2.89e-20,168;CL:0002032,9.97e-19,161;CL:0000837,9.97e-19,161;CL:0000738,2.24e-17,136;CL:0002031,4.32e-14,120;CL:0002087,2.72e-13,115;CL:0000134,1.70e-11,354;CL:0000048,1.25e-10,427;CL:0002320,5.18e-10,361;CL:0000723,6.82e-10,433;CL:0000034,1.72e-09,441;CL:0000081,1.67e-07,11;CL:0000219,2.27e-07,386;CL:0000094,7.25e-07,8;CL:0002393,9.78e-07,9;CL:0002397,9.78e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;7.12e-20;42!CL:0000049;2.17e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.08e-32!102;UBERON:0003061!4.08e-32!102;UBERON:0002193!2.04e-31!112;UBERON:0002371!5.49e-26!80;UBERON:0001474!2.23e-22!86;UBERON:0002405!5.03e-19!115;UBERON:0003081!2.50e-16!216;UBERON:0004765!1.06e-13!101;UBERON:0001434!1.06e-13!101;UBERON:0002204!2.50e-11!167;UBERON:0000178!8.05e-09!15;UBERON:0000179!8.05e-09!15;UBERON:0000463!8.05e-09!15;UBERON:0002384!4.50e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.65e-09;15!UBERON:0000179;5.65e-09;15!UBERON:0000463;5.65e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.74e-32,98;UBERON:0003061,3.74e-32,98;UBERON:0002193,2.16e-31,108;UBERON:0002371,2.66e-26,76;UBERON:0002405,9.66e-24,93;UBERON:0001474,1.72e-22,82;UBERON:0004765,1.15e-16,90;UBERON:0003081,1.68e-16,203;UBERON:0000926,3.70e-14,315;UBERON:0004120,3.70e-14,315;UBERON:0006603,3.70e-14,315;UBERON:0001434,2.61e-12,100;UBERON:0002204,3.64e-10,167;UBERON:0000178,5.64e-09,15;UBERON:0000179,5.64e-09,15;UBERON:0000463,5.64e-09,15;UBERON:0002384,2.15e-08,371 | |||
|phase1_expression=13.2625216867506,5.99481466894753,8.17535543756633,0,7.15137751083661,8.72338524100369,0,51.8010296210001,6.7908263331958,16.9556416186041,22.3296373751177,23.5916681900586,3.4289707169699,0.123766352960047,0,3.36162573225888,4.21886169616784,11.684961446198,7.3189919818576,1.35433163884467,3.87601313364081,0,0.572471974262113,0.958120975510189,1.38096903554283,0.0764134057479513,0.0821005894499457,0.0787107813136792,315.478150032821,163.511323589413,188.101589829032,3.67768489791571,3.31326510656075,2.9580320813343,1.93668001450754,1.42169232487422,32.2960483268332,57.0615270787834,231.628836828014,236.107827338847,26.1981104860711,29.7982172737461,5.92423805558629,151.795761285866,289.830848809317,349.806216232831,137.36556081126,269.726134542318,305.060775331677,126.296960229424,381.167131315302,413.843902305024,108.594889432035,247.220633812605,304.709594837269,143.628905071007,226.512104548012,250.117238187379,152.73586229308,277.924537447897,361.225476076458,97.635984855268,382.770758975912,499.535407624318,153.230477995892,249.08211363941,350.648926184509,112.056904704507,336.87796529945,396.804019276248,117.447503510874,280.627558622524,299.689880906518,82.8120722342812,228.124413862492,161.856474332466,62.2300616551583,143.418932663639,133.723688131971,116.000186702688,298.573932475834,238.924713124141,0,1.63841583378639,1.77901850772711,4.69403244823158,0.400395987036012,1.72425731986345,0,0,0.569212969109448,97.4813734355758,40.138688953149,64.7639510037227,106.496626966492,25.8116403079575,49.9642816089136,69.5629050066022,56.540412224865,0,0,8.04861269749047,17.534405556712,0,0,18.8303810396078,18.4146627360211,19.341789278577,17.2978932254638,38.4784696772602,35.0964522588027,0,0.444859689486181,22.2058887314462,27.179236189294,0,0.383220493601921,37.7990190030893,34.1576584226329,0.95569624297229,0,0.950452044448374,4.81840381048873,2.17577238962511,7.49584359314075,8.99753557767264,2.46338399076314,0.201606743224732,139.871222394774,89.6463060034526,2.43806866313962,34.8764447045891,13.0419813080401,0,0,6.51809335323707,1.5905718941022,0,0.567208902984407,0.221729397462564,0.351339142772504,28.0950116942594,1.45718115317017,12.977455497455,34.7265711210511,46.4926398589043,48.9285294709424,23.6105718062289,29.7437353605666,18.5728750664782,0,5.16140757063675,4.16568601929113,1.13061588384802,2.93649605346934,1.10047216776027,0,1.03366703667732,1.77883131343355,3.01248551488203,21.7527831238939,0,0.976248230192678,0,0,2.05389375053383,1.34717623575702,2.47745257063309,0,5.69559395740877,0,253.018401477241,756.171515089234,8.28578699070815,0,0,0.132409180813219,102.400673607327,30.1468124868603,5.60677600142307,0,0.24666754841716,4.04574346019696,14.683463255596,8.00963325255948,4.08665054641315,3.45705554687999,0.70296429550139,0.624320153660641,16.543682824789,109.246985483367,1.05691048779388,9.87424960645602,8.28659759543266,0,15.8456269332181,0.103325781175765,5.94001428641027,0.494533858557114,49.1487135446534,63.9570146216452,10.6051751791062,0.375355559615893,0,0,0,0.150238058906597,14.5193194444827,66.1947755691901,13.8812302732069,12.080118366095,63.9194034659777,10.3052529238439,0,0.18611685633159,95.0210750518329,17.8309719444993,28.5250164895849,9.75728925608373,21.6605716137208,0,0,31.1991489851297,1.15956511897978,0.545492241181669,0.286804595389004,0.365921118388786,0.132529768321485,0.580969714347592,0.518305275076852,0.504641701751257,0,15.6449532329816,13.5080597020506,12.4321429217232,26.4689718978228,23.1001434134267,32.5343700109571,35.2342002263233,27.7162684366004,35.6249531925632,33.9891932784154,32.5060748182202,36.6741158195647,33.5538705364342,38.474715694639,9.59602091012043,68.7184691636885,6.9967581926338,10.2906097969879,0,10.8110993834539,17.7236972004421,0,10.822982591794,8.40682270462775,12.4017822511747,2.24803506515239,2.71428225511403,0.833296006426766,1.62904152655162,89.4343915340437,1.44331342025273,0,4.3441216867254,5.77465791044295,6.01881166349594,7.41991193714933,0.790204397959275,2.57545848628462,56.8761284061888,135.956478045897,41.3194631162665,0,0,0,6.35865511190223,5.52204483176528,3.83382679165211,43.354364934843,37.9488750597004,117.969697742699,87.0484518638447,279.753232472858,1.20645999155121,4.58386110669933,16.4104426094066,6.84289784090821,1.7480673759565,6.60754727256618,8.00314011365619,8.40983132590205,0,3.59357600522655,0.775630294546667,78.6844180874141,7.607724773004,49.9963659179557,48.8834953483421,11.0599170932721,0,12.7882645927728,0.142977993658148,13.0229185293946,12.3486050517115,9.44634934451832,0,12.6712299669349,9.34462068884717,0,10.3971910829339,71.7580305783024,17.0767411086923,54.8168242655882,23.2436109826835,16.0806710167759,14.2636905040718,14.3333493600903,16.2326294814803,14.1458160959518,0.112085143993527,2.75843064282698,120.967069496189,112.941871926179,0.508189248444927,5.20559415430487,0,0,0,844.879923012422,421.817657477675,843.749985355768,0,0,0,0.623912584592421,29.2623541627345,23.497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| |||
|short_description=p1@EMR2 | |||
}} |
Latest revision as of 05:58, 16 September 2015
Short description: | p1@EMR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EMR2_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000392962, ENST00000392965_5end |
EntrezGene: | EMR2 |
HGNC: | 3337 |
UniProt: | B4DWB8E7ESD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.74e-32 | 98 |
blood island | 3.74e-32 | 98 |
hemolymphoid system | 2.16e-31 | 108 |
bone marrow | 2.66e-26 | 76 |
immune system | 9.66e-24 | 93 |
bone element | 1.72e-22 | 82 |
skeletal element | 1.15e-16 | 90 |
lateral plate mesoderm | 1.68e-16 | 203 |
mesoderm | 3.70e-14 | 315 |
mesoderm-derived structure | 3.70e-14 | 315 |
presumptive mesoderm | 3.70e-14 | 315 |
skeletal system | 2.61e-12 | 100 |
musculoskeletal system | 3.64e-10 | 167 |
blood | 5.64e-09 | 15 |
haemolymphatic fluid | 5.64e-09 | 15 |
organism substance | 5.64e-09 | 15 |
connective tissue | 2.15e-08 | 371 |