FFCP PHASE1:Hg19::chr19:39825928..39825976,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:39825928..39825976,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr19:39825928..39825976,- | |||
|id=chr19:39825928..39825976,- | |||
|ontology_enrichment_celltype=CL:0000037!3.43e-74!172;CL:0000566!3.43e-74!172;CL:0002032!1.31e-69!165;CL:0000837!1.31e-69!165;CL:0000988!9.60e-69!182;CL:0000763!1.05e-57!112;CL:0000049!1.05e-57!112;CL:0000738!2.73e-52!140;CL:0002087!3.31e-43!119;CL:0002031!1.28e-40!124;CL:0000766!5.51e-40!76;CL:0000557!2.68e-31!71;CL:0002194!3.77e-31!63;CL:0000576!3.77e-31!63;CL:0000040!3.77e-31!63;CL:0000559!3.77e-31!63;CL:0000839!7.69e-31!70;CL:0002009!8.03e-31!65;CL:0002057!4.56e-30!42;CL:0000860!4.84e-27!45;CL:0000134!2.76e-16!358;CL:0002320!3.04e-15!365;CL:0000219!4.95e-12!390;CL:0000084!5.06e-12!25;CL:0000827!5.06e-12!25;CL:0000542!4.16e-11!53;CL:0000051!4.16e-11!53;CL:0000838!1.38e-10!52;CL:0000034!6.68e-10!444;CL:0000048!7.00e-10!430;CL:0000094!2.01e-09!8;CL:0000723!2.89e-09!436;CL:0000791!7.48e-09!18;CL:0000789!7.48e-09!18;CL:0002420!7.48e-09!18;CL:0002419!7.48e-09!18;CL:0000790!7.48e-09!18;CL:0002393!6.47e-08!9;CL:0002397!6.47e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000763;6.32e-17;100!CL:0000860;4.43e-15;33!CL:0002057;4.43e-15;33!CL:0000094;5.14e-14;8!CL:0000473;4.20e-12;39!CL:0000234;4.20e-12;39!CL:0000576;9.05e-12;48!CL:0000766;1.78e-11;69!CL:0000081;8.00e-10;11!CL:0000988;2.40e-09;177!CL:0000775;2.08e-08;3!CL:0000738;1.30e-07;136!CL:0002144;9.85e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.95e-43,108;CL:0000049,1.95e-43,108;CL:0000037,8.73e-43,168;CL:0000988,1.11e-39,177;CL:0002032,6.15e-39,161;CL:0000837,6.15e-39,161;CL:0000766,3.59e-27,72;CL:0000738,4.63e-24,136;CL:0002194,1.97e-20,59;CL:0000576,1.97e-20,59;CL:0000040,1.97e-20,59;CL:0000559,1.97e-20,59;CL:0000473,1.25e-19,48;CL:0000234,1.25e-19,48;CL:0002009,1.64e-19,61;CL:0000860,1.75e-19,42;CL:0002057,1.75e-19,42;CL:0002087,5.68e-19,115;CL:0000839,1.86e-17,66;CL:0000557,4.40e-17,67;CL:0002031,1.26e-15,120;CL:0000094,6.34e-14,8;CL:0000134,4.78e-11,354;CL:0002320,1.63e-10,361;CL:0000081,9.27e-10,11;CL:0000219,1.17e-08,386;CL:0000775,2.09e-08,3;CL:0000034,1.11e-07,441;CL:0000048,6.62e-07,427;CL:0002144,7.18e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000049;3.37e-14;108!CL:0002057;1.29e-12;42 | |||
|ontology_enrichment_disease=DOID:1240!1.47e-28!39;DOID:2531!4.70e-24!51;DOID:0060083!4.70e-24!51;DOID:8692!3.71e-23!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.91e-20;31!DOID:1240;3.32e-16;39!DOID:2531;1.31e-12;51!DOID:0060083;1.31e-12;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.82e-21,39;DOID:8692,2.85e-21,31;DOID:2531,2.38e-18,51;DOID:0060083,2.38e-18,51 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.78e-41!112;UBERON:0002390!4.27e-39!102;UBERON:0003061!4.27e-39!102;UBERON:0002371!5.16e-27!80;UBERON:0002405!2.14e-25!115;UBERON:0001474!9.88e-24!86;UBERON:0004765!2.31e-17!101;UBERON:0001434!2.31e-17!101;UBERON:0002384!2.79e-14!375;UBERON:0003081!8.64e-14!216;UBERON:0000178!6.37e-10!15;UBERON:0000179!6.37e-10!15;UBERON:0000463!6.37e-10!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.20e-17;15!UBERON:0000179;5.20e-17;15!UBERON:0000463;5.20e-17;15!UBERON:0002390;1.90e-07;32!UBERON:0010523;9.85e-07;3!UBERON:0001915;9.85e-07;3!UBERON:0001982;9.85e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.34e-27,98;UBERON:0003061,1.34e-27,98;UBERON:0002193,2.27e-25,108;UBERON:0000178,5.47e-17,15;UBERON:0000179,5.47e-17,15;UBERON:0000463,5.47e-17,15;UBERON:0002371,1.46e-15,76;UBERON:0002405,2.06e-14,93;UBERON:0001474,7.39e-14,82;UBERON:0004765,5.95e-12,90;UBERON:0003081,4.22e-10,203;UBERON:0001434,5.08e-10,100;UBERON:0002384,8.64e-10,371;UBERON:0010523,7.18e-07,3;UBERON:0001915,7.18e-07,3;UBERON:0001982,7.18e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.0787107813136792,2.36018566109342,0.383829398097213,1.08371286321253,0,0,0,0.232401601740905,0.284338464974843,13.7992206487378,0.553995408531877,0.601633342410425,0.434021741431704,0.447830948479849,0,0.257575567634187,1.89017710413434,0.377875943688809,0.970336244751265,0.464858073811369,1.6446715520873,0.929119112685311,1.7261543539329,0.768482119587302,1.89185783910868,2.06847408441971,0,2.70852973188684,1.50593871634084,1.63743690034707,4.49446968890169,3.36692281607993,0.641858054152187,1.91801137739712,2.30895910130701,0.997318288108159,2.55734850319616,0.580418477257168,2.26954089876456,0,1.7587406567972,0.521482918420201,2.38907729175628,0.605399502633369,1.10483290796269,2.84816148696796,0.845021145247767,1.91343869968539,0.838634582033504,0.44931452458598,1.20141514273205,0.64290234678832,2.28010194992999,1.19350006319454,1.0959849225878,0,0,0,0.426730222566507,0.800791974072025,0.574752439954483,1.98313461835459,0,0,0,0,7.93027971474155,5.60508562981536,4.47752944117631,0.590129310341499,2.35806457649499,0.411202997999018,0.668745981562712,0,0.946895611469467,0,1.6711568532776,0.883817722424512,0.664601683750863,1.62482318259009,1.79327847615945,1.04047478047903,1.80881695064044,3.03985019564433,2.31842468588042,1.03800594213442,0.267540828089713,1.04535523804977,1.35971211237079,1.53288197440768,0.34362744548263,0.759059076058509,0.637130828648193,0.651083453856419,0,1.05402583354441,1.02389288923535,2.49861453104692,1.4206635122641,0,0.201606743224732,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,2.27183175558278,2.78607579678828,2.12732736830184,0,0,0.371457501329565,0,0.860234595106124,0,0,0,0,0.417989933073621,0.516833518338658,0,0.33472061276467,1.61131726843659,4.56163263431108,1.70843440283719,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,0,0,0,73.7970337641954,62.0448422637321,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,3.09024169590255,0,0,0,0,0,0,0,0,0,0,0,2.16549671641611,0.462985512576611,0.570762456703795,0,0,0.984868024349589,1.17002132569619,0.445893486866185,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,1.12085143993527,0.197030760201927,0,0.128343036279748,0,0,0,0,0,68.9086462031408,50.8574480646842,37.2973962092432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,1.50999940573032,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,1.0795795805107,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,13.7010854492686,19.8805673857018,19.9376515510957,19.5350055875387,20.5681136543097,25.290459136516,22.1412889267627,26.1731308177109,0,0,0,0.743212700502875,0.865615277858669,0.995985806877798,0.159426272728822,5.18906365725323,4.78763425330917,4.23347165447766,14.607987312355,7.58152380906339,4.33645890163065,0.47003968731907,2.50634477090067,3.55512733383367,2.24823305145179,0.80719882876419,0.425846237690326,0.687010689511529,0.614481528616916,0.447352215784832,1.00109485027145,0.586164286206121,1.11362469558097,2.46174797895425,8.38412603275548,9.65908707193678,8.45922030527097,0,0.293016358543788,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0.246169610922139,0,0,0.179021174675609,0.511572370226872,0.0986434056369336,19.1586473877552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,3.06579894587209,5.65128923022089,2.82559859230266,0.225595660617181,0.19606253431774,0,0,2.38404868470568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0.273810757783986,0,0,1.05154941711726,0,0,0,0,0,0.446342914883745,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,5.99275401470174,0,0,0.146552233678082,0,0,0,0,0,0.427149650270779,0.314408610199332,0.414239055347196,0.496166021811951,0.592834895693833,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,3.39978572953381,1.70706767510625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.751871343838829,0.257831551894309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| |||
|short_description=p@chr19:39825928..39825976,- | |||
}} |
Latest revision as of 07:31, 26 July 2015
Short description: | p@chr19:39825928..39825976, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:39825928..39825976, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.95e-43 | 108 |
common myeloid progenitor | 1.95e-43 | 108 |
hematopoietic stem cell | 8.73e-43 | 168 |
hematopoietic cell | 1.11e-39 | 177 |
hematopoietic oligopotent progenitor cell | 6.15e-39 | 161 |
hematopoietic multipotent progenitor cell | 6.15e-39 | 161 |
myeloid leukocyte | 3.59e-27 | 72 |
leukocyte | 4.63e-24 | 136 |
monopoietic cell | 1.97e-20 | 59 |
monocyte | 1.97e-20 | 59 |
monoblast | 1.97e-20 | 59 |
promonocyte | 1.97e-20 | 59 |
defensive cell | 1.25e-19 | 48 |
phagocyte | 1.25e-19 | 48 |
macrophage dendritic cell progenitor | 1.64e-19 | 61 |
classical monocyte | 1.75e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.75e-19 | 42 |
nongranular leukocyte | 5.68e-19 | 115 |
myeloid lineage restricted progenitor cell | 1.86e-17 | 66 |
granulocyte monocyte progenitor cell | 4.40e-17 | 67 |
hematopoietic lineage restricted progenitor cell | 1.26e-15 | 120 |
granulocyte | 6.34e-14 | 8 |
mesenchymal cell | 4.78e-11 | 354 |
connective tissue cell | 1.63e-10 | 361 |
blood cell | 9.27e-10 | 11 |
motile cell | 1.17e-08 | 386 |
neutrophil | 2.09e-08 | 3 |
stem cell | 1.11e-07 | 441 |
multi fate stem cell | 6.62e-07 | 427 |
capillary endothelial cell | 7.18e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.34e-27 | 98 |
blood island | 1.34e-27 | 98 |
hemolymphoid system | 2.27e-25 | 108 |
blood | 5.47e-17 | 15 |
haemolymphatic fluid | 5.47e-17 | 15 |
organism substance | 5.47e-17 | 15 |
bone marrow | 1.46e-15 | 76 |
immune system | 2.06e-14 | 93 |
bone element | 7.39e-14 | 82 |
skeletal element | 5.95e-12 | 90 |
lateral plate mesoderm | 4.22e-10 | 203 |
skeletal system | 5.08e-10 | 100 |
connective tissue | 8.64e-10 | 371 |
microcirculatory vessel | 7.18e-07 | 3 |
endothelium of capillary | 7.18e-07 | 3 |
capillary | 7.18e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.82e-21 | 39 |
myeloid leukemia | 2.85e-21 | 31 |
hematologic cancer | 2.38e-18 | 51 |
immune system cancer | 2.38e-18 | 51 |