FFCP PHASE1:Hg19::chr9:118916249..118916260,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:118916249..118916260,+
|short_description=p11@PAPPA
|description=CAGE_peak_11_at_PAPPA_5end
|association_with_transcript=166bp_to_ENST00000328252_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5069 | |EntrezGene=5069 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8602 | |HGNC=8602 | ||
|TSSclassifier=strong | |||
|UniProt=Q13219 | |UniProt=Q13219 | ||
|association_with_transcript=166bp_to_ENST00000328252_5end | |||
|cluster_id=chr9:118916249..118916260,+ | |||
|coexpression_cluster_id=C776 | |||
|description=CAGE_peak_11_at_PAPPA_5end | |||
|id=chr9:118916249..118916260,+ | |||
|ontology_enrichment_celltype=CL:0000192!7.26e-32!42;CL:0000514!7.26e-32!42;CL:0000187!4.41e-30!54;CL:0000359!2.58e-29!32;CL:0000680!1.02e-27!57;CL:0000056!1.02e-27!57;CL:0000355!1.02e-27!57;CL:0000183!2.78e-26!59;CL:0000393!1.34e-25!60;CL:0000211!1.34e-25!60;CL:0000055!6.13e-19!180;CL:0002539!4.29e-13!10;CL:0000222!3.33e-11!119;CL:0002494!2.38e-09!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.64e-26;32!CL:0000192;9.73e-16;43!CL:0002539;4.23e-14;10!CL:0002541;2.03e-13;3!CL:1000306;1.50e-09;4!CL:0002547;1.50e-09;4!CL:0002589;3.77e-09;2!CL:0000187;2.06e-08;55!CL:0002494;7.61e-08;16!CL:0002595;1.20e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.09e-28,32;CL:0000192,1.53e-22,43;CL:0000514,1.53e-22,43;CL:0000187,1.04e-16,55;CL:0000680,1.25e-15,58;CL:0000056,1.25e-15,58;CL:0000355,1.25e-15,58;CL:0000393,1.17e-14,61;CL:0000211,1.17e-14,61;CL:0002539,4.35e-14,10;CL:0002541,2.04e-13,3;CL:1000306,2.39e-09,4;CL:0002547,2.39e-09,4;CL:0002589,4.19e-09,2;CL:0002494,5.73e-08,16;CL:0002595,8.94e-08,5;CL:0000222,3.63e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;9.73e-16;43!CL:0000355;6.70e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;3.78e-28;33!UBERON:0004571;3.78e-28;33!UBERON:0001637;1.52e-20;42!UBERON:0003509;1.52e-20;42!UBERON:0004572;1.52e-20;42!UBERON:0004237;4.23e-14;10!UBERON:0004695;4.23e-14;10!UBERON:0002111;4.23e-14;10!UBERON:0004178;4.23e-14;10!UBERON:0000947;6.39e-14;21!UBERON:0010191;6.39e-14;21!UBERON:0003124;2.03e-13;3!UBERON:0000920;2.03e-13;3!UBERON:0007500;1.42e-10;56!UBERON:0001981;1.42e-10;56!UBERON:0004537;1.42e-10;56!UBERON:0005631;7.57e-10;10!UBERON:0000158;7.57e-10;10!UBERON:0004797;1.50e-09;4!UBERON:0000415;1.50e-09;4!UBERON:0007240;1.50e-09;4!UBERON:0005742;1.50e-09;4!UBERON:0005734;1.50e-09;4!UBERON:0004664;1.50e-09;4!UBERON:0004663;1.50e-09;4!UBERON:0001135;3.66e-09;15!UBERON:0001529;3.77e-09;2!UBERON:0007204;3.77e-09;2!UBERON:0000055;2.09e-08;65!UBERON:0003834;1.20e-07;5!UBERON:0001533;1.20e-07;5!UBERON:0000948;1.76e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,1.62e-30,33;UBERON:0004571,1.62e-30,33;UBERON:0001637,1.89e-29,42;UBERON:0003509,1.89e-29,42;UBERON:0004572,1.89e-29,42;UBERON:0004872,1.71e-23,83;UBERON:0007500,6.54e-22,59;UBERON:0001981,6.54e-22,59;UBERON:0004537,6.54e-22,59;UBERON:0006965,6.54e-22,59;UBERON:0000055,2.41e-18,68;UBERON:0002049,4.58e-17,78;UBERON:0007798,4.58e-17,78;UBERON:0004535,3.01e-16,109;UBERON:0001009,1.20e-15,112;UBERON:0001134,2.35e-14,62;UBERON:0002036,2.35e-14,62;UBERON:0003082,2.35e-14,62;UBERON:0004237,4.35e-14,10;UBERON:0004695,4.35e-14,10;UBERON:0002111,4.35e-14,10;UBERON:0004178,4.35e-14,10;UBERON:0000947,8.40e-14,21;UBERON:0010191,8.40e-14,21;UBERON:0002385,8.85e-14,64;UBERON:0001015,8.85e-14,64;UBERON:0000383,8.85e-14,64;UBERON:0002329,1.22e-13,71;UBERON:0003059,1.22e-13,71;UBERON:0007282,1.22e-13,71;UBERON:0004290,1.22e-13,71;UBERON:0009618,1.22e-13,71;UBERON:0000920,2.04e-13,3;UBERON:0003914,2.13e-13,117;UBERON:0003077,2.17e-13,72;UBERON:0007285,2.17e-13,72;UBERON:0007524,3.80e-13,73;UBERON:0007503,4.98e-12,78;UBERON:0000486,4.76e-11,83;UBERON:0003124,6.48e-10,7;UBERON:0005631,7.13e-10,14;UBERON:0000158,7.13e-10,14;UBERON:0000415,2.39e-09,4;UBERON:0007240,2.39e-09,4;UBERON:0005742,2.39e-09,4;UBERON:0005734,2.39e-09,4;UBERON:0004664,2.39e-09,4;UBERON:0004663,2.39e-09,4;UBERON:0001135,3.73e-09,15;UBERON:0004797,4.16e-09,7;UBERON:0001529,4.19e-09,2;UBERON:0007204,4.19e-09,2;UBERON:0003834,8.94e-08,5;UBERON:0001533,8.94e-08,5;UBERON:0003081,1.76e-07,203;UBERON:0000948,7.42e-07,24;UBERON:0005498,7.42e-07,24;UBERON:0004140,7.42e-07,24;UBERON:0009881,7.42e-07,24;UBERON:0004141,7.42e-07,24;UBERON:0003084,7.42e-07,24;UBERON:0007005,7.42e-07,24;UBERON:0004139,7.42e-07,24;UBERON:0004291,7.42e-07,24 | |||
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| ||
|short_description=p11@PAPPA | |||
}} | }} |
Latest revision as of 17:52, 24 September 2015
Short description: | p11@PAPPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PAPPA_5end |
Coexpression cluster: | C776_chorionic_placenta_Smooth_Aortic_Fibroblast_leiomyoma_mesothelioma |
Association with transcript: | 166bp_to_ENST00000328252_5end |
EntrezGene: | PAPPA |
HGNC: | 8602 |
UniProt: | Q13219 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.09e-28 | 32 |
smooth muscle cell | 1.53e-22 | 43 |
smooth muscle myoblast | 1.53e-22 | 43 |
muscle cell | 1.04e-16 | 55 |
muscle precursor cell | 1.25e-15 | 58 |
myoblast | 1.25e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.25e-15 | 58 |
electrically responsive cell | 1.17e-14 | 61 |
electrically active cell | 1.17e-14 | 61 |
aortic smooth muscle cell | 4.35e-14 | 10 |
chorionic membrane mesenchymal stem cell | 2.04e-13 | 3 |
fibroblast of tunica adventitia of artery | 2.39e-09 | 4 |
fibroblast of the aortic adventitia | 2.39e-09 | 4 |
smooth muscle cell of the brachiocephalic vasculature | 4.19e-09 | 2 |
cardiocyte | 5.73e-08 | 16 |
smooth muscle cell of the subclavian artery | 8.94e-08 | 5 |
mesodermal cell | 3.63e-07 | 121 |