FFCP PHASE1:Hg19::chr21:34100172..34100183,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8867 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11503 | |||
|TSSclassifier=strong | |||
|UniProt=O43426,C9JW66,B9EGN3 | |||
|association_with_transcript=66bp_to_ENST00000357345,ENST00000382491,ENST00000429236,NM_001160302,NM_001160306,uc002yqf.2,uc002yqg.2_5end | |||
|cluster_id=chr21:34100172..34100183,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_SYNJ1_5end | |||
|id=chr21:34100172..34100183,- | |||
|ontology_enrichment_celltype=CL:0000766!1.37e-29!76;CL:0000557!1.17e-25!71;CL:0002057!2.18e-25!42;CL:0000860!2.95e-25!45;CL:0002009!1.84e-24!65;CL:0000839!1.69e-23!70;CL:0000763!4.53e-23!112;CL:0000049!4.53e-23!112;CL:0002194!5.03e-23!63;CL:0000576!5.03e-23!63;CL:0000040!5.03e-23!63;CL:0000559!5.03e-23!63;CL:0000738!2.76e-21!140;CL:0000037!2.42e-18!172;CL:0000566!2.42e-18!172;CL:0002032!4.26e-17!165;CL:0000837!4.26e-17!165;CL:0000988!5.91e-17!182;CL:0002031!1.48e-15!124;CL:0002087!3.99e-15!119;CL:0002393!9.74e-07!9;CL:0002397!9.74e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.83e-37;33!CL:0002057;2.83e-37;33!CL:0000473;9.52e-26;39!CL:0000234;9.52e-26;39!CL:0000576;2.24e-25;48!CL:0000766;3.86e-24;69!CL:0000094;3.25e-22;8!CL:0000081;7.51e-16;11!CL:0000775;5.83e-12;3!CL:0000763;2.23e-10;100!CL:0000738;8.79e-10;136!CL:0002393;1.52e-09;6!CL:0002397;1.52e-09;6!CL:0000840;2.75e-09;5!CL:0000771;1.23e-08;2!CL:0002087;2.68e-08;104!CL:0001014;5.47e-08;2!CL:0001016;5.47e-08;2!CL:0000451;1.71e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.18e-57,72;CL:0000860,3.93e-53,42;CL:0002057,3.93e-53,42;CL:0002009,1.02e-45,61;CL:0000473,1.35e-45,48;CL:0000234,1.35e-45,48;CL:0000557,3.58e-44,67;CL:0000763,4.24e-42,108;CL:0000049,4.24e-42,108;CL:0002194,6.20e-41,59;CL:0000576,6.20e-41,59;CL:0000040,6.20e-41,59;CL:0000559,6.20e-41,59;CL:0000839,7.07e-39,66;CL:0000738,2.75e-33,136;CL:0000037,1.26e-26,168;CL:0002032,4.23e-25,161;CL:0000837,4.23e-25,161;CL:0000988,9.13e-25,177;CL:0000094,1.94e-22,8;CL:0002031,3.10e-21,120;CL:0002087,4.67e-19,115;CL:0000081,5.20e-16,11;CL:0002393,3.60e-13,9;CL:0002397,3.60e-13,9;CL:0000775,4.73e-12,3;CL:0002320,1.83e-11,361;CL:0000134,2.21e-10,354;CL:0000840,2.00e-09,5;CL:0001029,2.00e-09,5;CL:0000771,1.03e-08,2;CL:0000048,1.19e-08,427;CL:0000219,1.46e-08,386;CL:0000723,2.22e-08,433;CL:0001014,4.07e-08,2;CL:0001016,4.07e-08,2;CL:0000034,4.95e-08,441;CL:0000451,1.58e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.99e-38;42!CL:0000049;1.30e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.21e-23!102;UBERON:0003061!1.21e-23!102;UBERON:0002371!1.32e-22!80;UBERON:0002193!4.07e-22!112;UBERON:0001474!1.40e-21!86;UBERON:0004765!7.59e-20!101;UBERON:0001434!7.59e-20!101;UBERON:0002405!3.33e-15!115;UBERON:0002204!6.34e-12!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.86e-38,76;UBERON:0004765,2.31e-35,90;UBERON:0001474,1.08e-34,82;UBERON:0002390,3.34e-34,98;UBERON:0003061,3.34e-34,98;UBERON:0002193,3.39e-32,108;UBERON:0002405,1.00e-31,93;UBERON:0001434,5.27e-31,100;UBERON:0002204,1.20e-17,167;UBERON:0003081,4.06e-14,203;UBERON:0002384,7.32e-11,371 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,1.36142988256051,0,0,0.602694528023977,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0,0,2.75354993794233,2.30297638858328,0,0,0,0,0.0774672005803016,0,0.293600439334847,2.21598163412751,2.00544447470142,1.08505435357926,0.447830948479849,0.32389366601898,0.257575567634187,0.872389432677388,1.88937971844405,0.485168122375632,1.39457422143411,0.822335776043652,1.54853185447552,1.7261543539329,0.768482119587302,1.18241114944293,2.06847408441971,1.93645405075148,0,1.12945403725563,0.545812300115692,2.02251136000576,3.06083892370903,0.962787081228281,1.91801137739712,0,0.598390972864896,0.852449501065388,2.61188314765726,2.26954089876456,1.24564449799115,1.25624332628372,1.0429658368404,2.38907729175628,2.42159801053347,1.10483290796269,2.84816148696796,0.422510572623884,1.4882300997553,0.628975936525128,1.79725809834392,0.300353785683013,0.964353520182481,1.42506371870624,1.59133341759272,0.182664153764634,0,0.546138611262131,0,0.853460445133014,0,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0,0.616804496998528,0.167186495390678,0.32592226663359,1.4203434172042,0,0.668462741311041,0,0.443067789167242,0,0,0.130059347559878,0.164437904603676,0.276350017785848,0,0,0,0,0.113309342697566,0.766440987203842,1.03088233644789,0.506039384039006,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0.604820229674197,0.267440195783507,0.579297615531196,0,0,0,2.1686349143074,3.50936537445123,3.76600949298142,0.795285947051099,0.973269740605272,0,0,0,0.261958150995425,0,0,1.62273696827342,1.21890816109487,0.930705723632056,0,1.14398982156026,0,0.39752481473341,0,0,0,0.419499436209906,0,0.417989933073621,1.03366703667732,0.35576626268671,0,0.402829317109147,0,0,0,0,0.17859945656816,0,0,0,0,0.366403487860815,2.63560834872127,19.3890132074163,0,0,0.12663051166458,0.529636723252875,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0.408308342509787,0,0,1.18800285728205,0,0,0,0,0,0.277064115484183,0.438977620880838,0,0,0,0.358779271377724,0,0.423863802319124,0,0.103052529238439,0,0,0.168776332241266,0.194874010322397,0.504867548488229,0,0.323292113637624,0,0.604512589365842,0.169560592310488,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0.435758888184812,0,0,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0.492434012174795,0.702012795417713,0.445893486866185,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0,11.3312544716067,0.264145302039678,0.414656231081544,0.144119953416961,0.6312121671319,0.063497894292169,0,0,0,0.205654985406647,0.300343057843917,0.285826432630578,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0.821905290201534,0.358121926479791,0.336255431980582,0.394061520403854,0.215627574859517,0.77005821767849,0.254094624222463,0,0,0.167516265334349,0,2.24702107184155,2.99161459204025,7.0450637284126,0.36807447515742,0,1.08506009479894,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.620304078368662,1.2942852049117,0.320182673410333,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0.116210378459959,0.241718899183244,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.27470839445503,0.41254749960294,0,0,0,0,0,0.15350367472613,0,0.214840489736547,0,0,0.0890320356467374,0.165284915360978,0,0.765676274967505,0,0.464845549297286,1.5740617341532,0,0,0.532306030317022,0,0.18532421910392,0.286249773483982,0,0.632758849437452,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,1.05650146756755,0.272999822815972,0,0,0,0,0.438450885253763,0,0,0.405820753925408,0.30982349809975,0.281695602532241,0,0.0982490410131212,0,0.354761064070598,0.422215270595328,0.329294892959902,0.379473173765715,0,0,0,0,0.376575203107117,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0.822724546172388,1.94541993357815,2.16012574895246,0.79312517629427,0,0,0.245040215981032,0.371606350251437,0,0.142283686696828,0,0.199579371432817,0.191505370132367,0.423347165447766,0,0,0,0,0,0.169291777801603,0,0.201799707191048,0.851692475380653,0,0,0,0.166849141711909,0.19538809540204,0.556812347790485,0,0,0.66614393599564,1.4098700508785,0.37428108081644,0,0,0.445773537109913,0.852408440419239,0,0,0,0.994147647766298,0.422008249231538,0.445234820091624,0.16480387422676,0.422250816255987,0,0,0.251932747854276,0,0.123084805461069,0,0,0.358042349351218,0,0,0,0,0.969332746095218,0.556608588971108,0,0,0.0874599999961957,0,0,0,0.236387681767936,0,0.291604613383254,0.173624994933292,0,0,0,0.331737779793674,0,0,0.10893846351899,0.278847488557207,0.0769502585037971,0,0.23056390438806,0.269272933229316,0.217294743844016,0,0.183195186803725,0,0,0,0,0.225595660617181,0,0.167821586975843,0.189753732724185,0,0,0.163232808159148,0.282706142867882,0.216388639742091,0,0.0884575645033392,0,0.2965211286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| |||
|short_description=p4@SYNJ1 | |||
}} |
Latest revision as of 03:27, 18 September 2015
Short description: | p4@SYNJ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SYNJ1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 66bp_to_ENST00000357345, ENST00000382491, ENST00000429236, NM_001160302, NM_001160306, uc002yqf.2, uc002yqg.2_5end |
EntrezGene: | SYNJ1 |
HGNC: | 11503 |
UniProt: | O43426C9JW66B9EGN3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.86e-38 | 76 |
skeletal element | 2.31e-35 | 90 |
bone element | 1.08e-34 | 82 |
hematopoietic system | 3.34e-34 | 98 |
blood island | 3.34e-34 | 98 |
hemolymphoid system | 3.39e-32 | 108 |
immune system | 1.00e-31 | 93 |
skeletal system | 5.27e-31 | 100 |
musculoskeletal system | 1.20e-17 | 167 |
lateral plate mesoderm | 4.06e-14 | 203 |
connective tissue | 7.32e-11 | 371 |