FFCP PHASE1:Hg19::chr22:38349673..38349723,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5435 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9193 | |||
|TSSclassifier=strong | |||
|UniProt=B0QYL8,B0QYL9,F8WC47,P61218 | |||
|association_with_transcript=0bp_to_ENST00000405557,ENST00000407936,ENST00000443002,ENST00000460648,ENST00000483713,ENST00000488684,ENST00000492213,NM_021974,uc003aul.2,uc003aum.2,uc010gxi.2_5end | |||
|cluster_id=chr22:38349673..38349723,+ | |||
|description=CAGE_peak_1_at_POLR2F_5end | |||
|id=chr22:38349673..38349723,+ | |||
|ontology_enrichment_celltype=CL:0002321!6.16e-18!248;CL:0000220!2.70e-17!246;CL:0000055!2.39e-16!180;CL:0000222!2.39e-16!119;CL:0000183!4.39e-16!59;CL:0000393!5.25e-16!60;CL:0000211!5.25e-16!60;CL:0000187!1.05e-13!54;CL:0000680!1.09e-13!57;CL:0000056!1.09e-13!57;CL:0000355!1.09e-13!57;CL:0000192!2.53e-11!42;CL:0000514!2.53e-11!42;CL:0000359!1.55e-09!32;CL:1000449!8.02e-08!16;CL:0002078!5.31e-07!44;CL:0002681!8.32e-07!13;CL:0002584!8.32e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.39e-09;32!CL:0000187;1.46e-08;55!CL:0000192;1.48e-08;43!CL:0000393;2.80e-08;61!CL:0000211;2.80e-08;61!CL:1000449;2.30e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.24e-18,250;CL:0000222,4.14e-17,121;CL:0000393,1.90e-16,61;CL:0000211,1.90e-16,61;CL:0000187,3.91e-14,55;CL:0000680,4.09e-14,58;CL:0000056,4.09e-14,58;CL:0000355,4.09e-14,58;CL:0000192,9.46e-12,43;CL:0000514,9.46e-12,43;CL:0000359,1.55e-09,32;CL:1000449,2.26e-07,15;CL:0002078,2.41e-07,45;CL:0000115,7.12e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000514;1.48e-08;43!CL:0000355;4.33e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!2.62e-18!312;UBERON:0000483!5.70e-18!309;UBERON:0005256!5.14e-17!143;UBERON:0003914!9.17e-17!118;UBERON:0000481!7.94e-16!347;UBERON:0000914!4.04e-15!83;UBERON:0002329!4.04e-15!83;UBERON:0003077!4.04e-15!83;UBERON:0003059!4.04e-15!83;UBERON:0007282!4.04e-15!83;UBERON:0009618!4.04e-15!83;UBERON:0007285!4.04e-15!83;UBERON:0004290!1.92e-14!70;UBERON:0000486!6.37e-14!82;UBERON:0002100!9.22e-14!216;UBERON:0000475!9.96e-14!365;UBERON:0003104!1.38e-13!238;UBERON:0009142!1.38e-13!238;UBERON:0000025!4.59e-13!194;UBERON:0001134!9.94e-13!61;UBERON:0002036!9.94e-13!61;UBERON:0003082!9.94e-13!61;UBERON:0002049!3.24e-12!79;UBERON:0007798!3.24e-12!79;UBERON:0000490!8.53e-12!138;UBERON:0002385!9.72e-12!63;UBERON:0001015!9.72e-12!63;UBERON:0000383!9.72e-12!63;UBERON:0001981!2.00e-11!60;UBERON:0007500!2.00e-11!60;UBERON:0004537!2.00e-11!60;UBERON:0006965!2.00e-11!60;UBERON:0000477!4.30e-11!286;UBERON:0004872!7.28e-11!84;UBERON:0000055!7.67e-11!69;UBERON:0001637!6.52e-10!42;UBERON:0003509!6.52e-10!42;UBERON:0004572!6.52e-10!42;UBERON:0004111!1.53e-09!241;UBERON:0004211!8.02e-08!16;UBERON:0001285!8.02e-08!16;UBERON:0007684!8.02e-08!16;UBERON:0003220!8.02e-08!16;UBERON:0004208!8.02e-08!16;UBERON:0001009!9.28e-08!113;UBERON:0004535!2.05e-07!110;UBERON:0003103!2.37e-07!69;UBERON:0004573!2.53e-07!33;UBERON:0004571!2.53e-07!33;UBERON:0006555!6.23e-07!17;UBERON:0005103!6.23e-07!17;UBERON:0000083!6.23e-07!17;UBERON:0009201!6.23e-07!17;UBERON:0004819!6.23e-07!17;UBERON:0006553!6.23e-07!17;UBERON:0003074!6.23e-07!17;UBERON:0003060!6.23e-07!17;UBERON:0001225!8.32e-07!13;UBERON:0008987!8.32e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;1.25e-07;74!UBERON:0006555;2.30e-07;15!UBERON:0004819;2.30e-07;15!UBERON:0001285;2.30e-07;15!UBERON:0007684;2.30e-07;15!UBERON:0007500;3.61e-07;56!UBERON:0001981;3.61e-07;56!UBERON:0004537;3.61e-07;56!UBERON:0001637;4.42e-07;42!UBERON:0003509;4.42e-07;42!UBERON:0004572;4.42e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,2.81e-19,309;UBERON:0000483,6.20e-19,306;UBERON:0007503,2.54e-18,78;UBERON:0003104,1.37e-16,160;UBERON:0009142,1.37e-16,160;UBERON:0003914,2.26e-16,117;UBERON:0003077,4.65e-15,72;UBERON:0007285,4.65e-15,72;UBERON:0007524,6.91e-15,73;UBERON:0002329,7.35e-15,71;UBERON:0003059,7.35e-15,71;UBERON:0007282,7.35e-15,71;UBERON:0004290,7.35e-15,71;UBERON:0009618,7.35e-15,71;UBERON:0000486,2.55e-14,83;UBERON:0005256,7.59e-14,122;UBERON:0000490,8.96e-14,148;UBERON:0000025,3.58e-13,192;UBERON:0001134,3.86e-13,62;UBERON:0002036,3.86e-13,62;UBERON:0003082,3.86e-13,62;UBERON:0002049,1.59e-12,78;UBERON:0007798,1.59e-12,78;UBERON:0002100,1.90e-12,199;UBERON:0002385,3.89e-12,64;UBERON:0001015,3.89e-12,64;UBERON:0000383,3.89e-12,64;UBERON:0007500,8.77e-12,59;UBERON:0001981,8.77e-12,59;UBERON:0004537,8.77e-12,59;UBERON:0006965,8.77e-12,59;UBERON:0000055,3.76e-11,68;UBERON:0004872,3.92e-11,83;UBERON:0001637,6.52e-10,42;UBERON:0003509,6.52e-10,42;UBERON:0004572,6.52e-10,42;UBERON:0004111,1.41e-09,240;UBERON:0001009,6.29e-08,112;UBERON:0004535,1.40e-07,109;UBERON:0004211,2.26e-07,15;UBERON:0009773,2.26e-07,15;UBERON:0001231,2.26e-07,15;UBERON:0001285,2.26e-07,15;UBERON:0007684,2.26e-07,15;UBERON:0004208,2.26e-07,15;UBERON:0004573,2.53e-07,33;UBERON:0004571,2.53e-07,33;UBERON:0010314,2.67e-07,132;UBERON:0003103,4.93e-07,68 | |||
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| |||
|short_description=p1@POLR2F | |||
}} |
Latest revision as of 06:55, 20 September 2015
Short description: | p1@POLR2F |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_POLR2F_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000405557, ENST00000407936, ENST00000443002, ENST00000460648, ENST00000483713, ENST00000488684, ENST00000492213, NM_021974, uc003aul.2, uc003aum.2, uc010gxi.2_5end |
EntrezGene: | POLR2F |
HGNC: | 9193 |
UniProt: | B0QYL8B0QYL9F8WC47P61218 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.24e-18 | 250 |
mesodermal cell | 4.14e-17 | 121 |
electrically responsive cell | 1.90e-16 | 61 |
electrically active cell | 1.90e-16 | 61 |
muscle cell | 3.91e-14 | 55 |
muscle precursor cell | 4.09e-14 | 58 |
myoblast | 4.09e-14 | 58 |
multi-potent skeletal muscle stem cell | 4.09e-14 | 58 |
smooth muscle cell | 9.46e-12 | 43 |
smooth muscle myoblast | 9.46e-12 | 43 |
vascular associated smooth muscle cell | 1.55e-09 | 32 |
epithelial cell of nephron | 2.26e-07 | 15 |
meso-epithelial cell | 2.41e-07 | 45 |
endothelial cell | 7.12e-07 | 36 |