FFCP PHASE1:Hg19::chr2:134325974..134325985,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=344148 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29847 | |||
|TSSclassifier=strong | |||
|UniProt=O14513 | |||
|association_with_transcript=45bp_to_ENST00000409261,NM_207363,NM_207481,uc002ttp.2,uc002ttq.2,uc002ttt.1_5end | |||
|cluster_id=chr2:134325974..134325985,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_5_at_NCKAP5_5end | |||
|id=chr2:134325974..134325985,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002174;3.69e-08;1!CL:0000501;3.69e-08;1!CL:1000306;6.36e-08;4!CL:0002547;6.36e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002174,4.11e-08,1;CL:0000501,4.11e-08,1;CL:1000306,5.45e-08,4;CL:0002547,5.45e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.69e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3571;1.41e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,1.41e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.74e-21!115;UBERON:0001049!1.22e-16!57;UBERON:0005068!1.22e-16!57;UBERON:0006241!1.22e-16!57;UBERON:0007135!1.22e-16!57;UBERON:0002616!1.65e-15!59;UBERON:0000955!1.53e-14!69;UBERON:0006238!1.53e-14!69;UBERON:0001017!2.19e-14!82;UBERON:0002780!2.77e-14!41;UBERON:0001890!2.77e-14!41;UBERON:0006240!2.77e-14!41;UBERON:0005743!5.20e-14!86;UBERON:0000073!5.47e-14!94;UBERON:0001016!5.47e-14!94;UBERON:0000153!5.73e-14!129;UBERON:0007811!5.73e-14!129;UBERON:0003080!9.85e-14!42;UBERON:0001893!6.27e-13!34;UBERON:0002020!1.03e-12!34;UBERON:0003528!1.03e-12!34;UBERON:0003075!1.29e-12!86;UBERON:0007284!1.29e-12!86;UBERON:0002791!1.80e-12!33;UBERON:0000033!1.82e-12!123;UBERON:0002346!1.97e-12!90;UBERON:0001869!2.04e-11!32;UBERON:0004111!6.44e-11!241;UBERON:0000477!6.88e-11!286;UBERON:0003056!2.18e-10!61;UBERON:0000025!4.42e-10!194;UBERON:0000119!8.69e-10!312;UBERON:0002619!1.00e-09!22;UBERON:0000483!2.60e-09!309;UBERON:0000924!2.91e-09!173;UBERON:0006601!2.91e-09!173;UBERON:0004121!3.07e-09!169;UBERON:0000481!3.79e-09!347;UBERON:0001950!3.65e-08!20;UBERON:0000956!4.94e-08!25;UBERON:0000203!4.94e-08!25;UBERON:0000468!5.47e-08!659;UBERON:0000475!7.47e-08!365;UBERON:0000922!3.04e-07!612;UBERON:0000467!3.62e-07!625;UBERON:0000480!4.31e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;9.94e-16;2!UBERON:0002757;9.94e-16;2!UBERON:0010134;9.94e-16;2!UBERON:0005408;9.94e-16;2!UBERON:0001899;9.94e-16;2!UBERON:0007029;1.26e-08;1!UBERON:0003296;2.69e-08;4!UBERON:0010133;2.69e-08;4!UBERON:0002784;2.69e-08;4!UBERON:0000941;3.69e-08;1!UBERON:0001785;3.69e-08;1!UBERON:0002464;3.69e-08;1!UBERON:0004904;3.69e-08;1!UBERON:0001021;3.69e-08;1!UBERON:0004797;6.36e-08;4!UBERON:0000415;6.36e-08;4!UBERON:0007240;6.36e-08;4!UBERON:0005742;6.36e-08;4!UBERON:0005734;6.36e-08;4!UBERON:0004664;6.36e-08;4!UBERON:0004663;6.36e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,9.98e-16,2;UBERON:0002757,9.98e-16,2;UBERON:0010134,9.98e-16,2;UBERON:0005408,9.98e-16,2;UBERON:0001899,9.98e-16,2;UBERON:0007029,1.22e-08,1;UBERON:0003296,2.69e-08,4;UBERON:0010133,2.69e-08,4;UBERON:0002784,2.69e-08,4;UBERON:0000941,3.33e-08,1;UBERON:0001785,3.33e-08,1;UBERON:0002464,3.33e-08,1;UBERON:0004904,3.33e-08,1;UBERON:0001021,3.33e-08,1;UBERON:0003902,3.33e-08,1;UBERON:0005425,3.33e-08,1;UBERON:0000415,5.45e-08,4;UBERON:0007240,5.45e-08,4;UBERON:0005742,5.45e-08,4;UBERON:0005734,5.45e-08,4;UBERON:0004664,5.45e-08,4;UBERON:0004663,5.45e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0.71153252537342,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,2.25095607382472,1.72101972449288,0.354668382198357,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0.300091096084402,0,0.515281080091258,0,0,0,0,0,0,0,0.10075209822764,0,0,0.545492241181669,0.286804595389004,0,0,0,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.439001141634502,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0,0,0.858486162094873,0,0,0,0,1.00789276919316,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0.775630294546667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0.340187410553031,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0.165284915360978,0,1.02090169995667,0.10115778085555,0,1.5740617341532,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0.190630193923825,0,0.42793898803392,0.636406495851874,0.78494864019923,0,0,0,0,0,0,0,0.487426979262569,0,0.136499911407986,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0.6196469961995,0,0,0.0982490410131212,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0.0941438007767792,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.422008249231538,0,0,1.90012867315194,0.19924798825107,0,1.76352923497993,0.20453736500431,0,0.311039587661807,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0.341380344856499,0,0,0,0,0,0.885741385813839,0.361789315876224,1.52581736317083,0.663475559587348,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.707660516026713,0,0,0,0,0.606610196826093,0.802577647298789,0.234264445725339,0,0,0,0,0,1.53036380815245,0.063186579628488,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.50648636764703,0,0,0,0,0.288180834308212,0,0.343189995723929,0,0.124252535565433,0,0,0,0,0,0,0.821432273351958,0,1.28929632425987,0,0.279282401272254,0.687481272035051,0,0.199679000498991,0,0,0.268733889946905,3.24269895188163,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0.182248669974074,0,1.41850273138557,1.04909176269996,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0.146552233678082,0,0.129282956361551,0.26446520348538,0,0,0.106787412567695,1.10043013569766,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0,0,0.366078794705889,0.3755727921195,0,0.221858103073705,0.496771223531068,0.138348634936231,0.249960815924213,0,0,0.470531639396343,0,0,0,0,0,0,0.251567901752575,0,0.228840068396924,0,0.15543720058278,0.147855149989634,0.318593534327405,0,0.310525913752519,0.829412415681711,0,1.04349012362347,0,0,0.406870733204662,0.909243296012797,0,1.85613503951397,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10086159299127,0,0,0,4.21381598480607,0,0,5.59918389508899,0,0,0,0.256916900385838,0,0.159633859057151,0.205116364240755,0.756215088665154,0.345786262321089,0.645902582527404,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0.135075169236789,0,0,0.507326481551255,2.7348740450911,0,0.496211178389294,0,0,8.57122937405259,12.1062139998777,0,0,0,0,0,0.543757863814654,0.263091094251396,0,0,0.078493092850514,0.314231179832004,0.280272163313789,0.913158720509496,0.647782773655864,0,0.500335809236594,0,0,0,0,0,0.51215543128185,0.691259661814092,0.860454717640555,0.236664001461131,0,0.423387050190929,0,0,0,0,0,0.121917924982269,0,0,1.1598144313382,4.85710993059139,0,0,0,0,0,2.71733118420012,0.771741581079447,0.218559560503957,0,0.245148321753905,0,0,0.297046400327086,0.4226557275834,0.169927114687817,0,0.193373663920732,0,0,0,0,0,0.458729283404541,0.430018749454354,0.473314686579554,0.203974470572744,0.436350690340377,0.5290268405154,0,0.462175628631418,0,0,0,0,0,0,0.18378979906969,0,0.0757786982182394,0,0,0.310298987585686,0.639701945702943,0.476128862927481,0.129177819672012,0.620747142958579,0,0.0636471582781649,0,0.870866991587845,0,0.0673520530145875,0.286888821570705,0.665320713092027,0,0,1.9307228228694,0.538951212639521,0,0.24448288836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| |||
|short_description=p5@NCKAP5 | |||
}} |
Latest revision as of 00:51, 17 September 2015
Short description: | p5@NCKAP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NCKAP5_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 45bp_to_ENST00000409261, NM_207363, NM_207481, uc002ttp.2, uc002ttq.2, uc002ttt.1_5end |
EntrezGene: | NCKAP5 |
HGNC: | 29847 |
UniProt: | O14513 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
follicular cell of ovary | 4.11e-08 | 1 |
granulosa cell | 4.11e-08 | 1 |
fibroblast of tunica adventitia of artery | 5.45e-08 | 4 |
fibroblast of the aortic adventitia | 5.45e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
pineal body | 9.98e-16 | 2 |
regional part of epithalamus | 9.98e-16 | 2 |
secretory circumventricular organ | 9.98e-16 | 2 |
circumventricular organ | 9.98e-16 | 2 |
epithalamus | 9.98e-16 | 2 |
surface | 1.22e-08 | 1 |
gland of diencephalon | 2.69e-08 | 4 |
neuroendocrine gland | 2.69e-08 | 4 |
regional part of diencephalon | 2.69e-08 | 4 |
cranial nerve II | 3.33e-08 | 1 |
cranial nerve | 3.33e-08 | 1 |
nerve trunk | 3.33e-08 | 1 |
nerve connecting eye with brain | 3.33e-08 | 1 |
nerve | 3.33e-08 | 1 |
retinal neural layer | 3.33e-08 | 1 |
presumptive neural retina | 3.33e-08 | 1 |
artery wall | 5.45e-08 | 4 |
tunica adventitia of artery | 5.45e-08 | 4 |
adventitia | 5.45e-08 | 4 |
tunica adventitia of blood vessel | 5.45e-08 | 4 |
aorta tunica adventitia | 5.45e-08 | 4 |
aorta wall | 5.45e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 1.41e-08 | 1 |