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FFCP PHASE1:Mm9::chr11:109159435..109159456,-: Difference between revisions

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{{FFCP|EntrezGene=19739|HGNC=|MCL_coexpression_id=2594|UniProt=O54828|association_with_transcript=0bp_to_ENSMUST00000020920_5end|description=CAGE_peak_1_at_Rgs9_5end|id=chr11:109159435..109159456,-|ontology_enrichment_celltype=CL:0000540!1.00e-07!33;CL:0000047!1.00e-07!33;CL:0000031!1.00e-07!33;CL:0000404!1.00e-07!33|ontology_enrichment_celltype_v019_2=CL:0000540,3.15e-08,33;CL:0000047,3.15e-08,33;CL:0000031,3.15e-08,33;CL:0000404,3.15e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.90e-18!71;UBERON:0003075!3.90e-18!71;UBERON:0007284!3.90e-18!71;UBERON:0004121!2.52e-16!102;UBERON:0000924!2.52e-16!102;UBERON:0006601!2.52e-16!102;UBERON:0003056!4.15e-16!49;UBERON:0000033!4.48e-16!63;UBERON:0001017!2.78e-15!73;UBERON:0005743!2.78e-15!73;UBERON:0000073!1.39e-14!75;UBERON:0001016!1.39e-14!75;UBERON:0001049!3.48e-13!52;UBERON:0005068!3.48e-13!52;UBERON:0006241!3.48e-13!52;UBERON:0007135!3.48e-13!52;UBERON:0000955!7.04e-12!50;UBERON:0006238!7.04e-12!50;UBERON:0003080!1.23e-11!40;UBERON:0002616!2.15e-11!49;UBERON:0002780!4.23e-11!39;UBERON:0001890!4.23e-11!39;UBERON:0006240!4.23e-11!39;UBERON:0000153!8.98e-11!94;UBERON:0007811!7.20e-09!86;UBERON:0002020!1.73e-08!34|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.03e-19,64;UBERON:0003075,1.03e-19,64;UBERON:0007284,1.03e-19,64;UBERON:0003056,2.87e-17,49;UBERON:0010371,6.83e-16,73;UBERON:0001017,1.14e-15,73;UBERON:0004121,7.24e-15,95;UBERON:0000924,7.24e-15,95;UBERON:0006601,7.24e-15,95;UBERON:0001016,1.71e-14,75;UBERON:0000073,1.73e-14,54;UBERON:0001049,6.63e-14,52;UBERON:0005068,6.63e-14,52;UBERON:0006241,6.63e-14,52;UBERON:0007135,6.63e-14,52;UBERON:0003080,1.96e-12,40;UBERON:0002780,7.44e-12,39;UBERON:0001890,7.44e-12,39;UBERON:0006240,7.44e-12,39;UBERON:0000955,1.43e-11,47;UBERON:0006238,1.43e-11,47;UBERON:0002616,4.65e-11,46;UBERON:0010314,1.40e-09,92;UBERON:0002020,4.94e-09,34;UBERON:0001894,4.86e-07,10;UBERON:0006222,4.86e-07,10;UBERON:0003528,9.42e-07,29;UBERON:0002791,9.42e-07,29;UBERON:0001893,9.42e-07,29|phase1_expression=3.04282809499109,0,0,0.30246421130683,0,2.01455126294268,0.233612640595526,1.80772652818207,0.281577444303333,0.70219357896598,0.34243593645101,0.159544317990673,0,0,0,0,0,0.157731082679119,0,0,6.88850650223665,0,0,0.639969691173627,0.91763712426868,0.57423196411502,0,0.646413698057667,0,0.252030129759931,0,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0.629484089877886,0.304130793658544,0,0,0.436050312760893,0,0.58328969722285,0.279972843250725,0,0.838913030288682,1.45072428402269,0.336093799142464,0,0,0.515672092277442,4.04632921719196,4.23192783417626,1.90149421051854,0.338844532069132,0,0,0,0,0.898800331555214,0.768436610643109,1.65903379693564,1.4850653216486,1.26194976810829,6.56997264128748,5.07997644188711,1.46988959057945,1.0543001812006,2.75765635983006,8.8092704799511,3.57524546638526,2.4577045320999,5.80299666012853,7.22752384459036,3.64639359389732,3.90856198601933,5.6276261003168,5.80633341551878,5.89257170947335,11.6744778255264,4.65998614563251,0.681535739998656,0.529000920747499,0,0,0,0,0.649776417447669,0,1.40444420131752,0,0,0,3.94361575374705,0,0,0,0,0.253359865475099,0.505524445014783,1.37020655662872,2.84831672011889,1.92974780784272,1.73485326766136,2.43572382649713,2.30615497256059,2.41156224884196,2.4693628498498,0.628332956648377,0,0.433798070759735,0,0.485300549842228,0.441683036920787,0,0,1.46390398505774,0.628340120440365,2.81002760729451,0.239630249011841,0,0,8.68785708547972,173.392728468259,12.5654352112864,14.2535942557667,17.6443665557928,23.0644729461112,63.1118513333577,2.44414473240759,7.58882520721567,35.8866316975818,93.225742157708,4.55421550369463,2.29902104433473,4.32149111532838,9.49440352365005,18.4378912700098,20.6263089658608,18.1781345645874,223.51971231851,4.52692785158969,9.26619792822314,5.27853372491847,2.19195732427575,5.56094498451196,2.089512999133,2.88094990971121,0.796137067273973,0,0,0.284163499395593,0.621377317606506,0.938104239924385,0.36012412292203,0.23674473558521,0.590292695242212,0.462801338662135,0.232533944750408,0.804820204198858,0.116765342367169,0.329119699826961,0,0.162137619091711,0,0.219550115291051,0.536825675041487,4.41608891984667,3.91037527041281,0,1.05780226665418,3.19932375802851,3.25131340604614,3.35055399437443,4.23535401709019,4.89231696458715,3.42406127002606,3.32170343081158,6.0938613247884,6.53471542880701,7.36138946552258,5.65395852645448,2.69645822596266,3.45820879799511,2.58883655230677,1.13800740571849,2.51346727741403,1.1270773567308,0.203651327845314,1.35766741017338,1.26244475802573,1.26473074248515,2.21415221969403,2.04098346193787,1.72756029490521,0.296452627087149,0.166845105716094,0,0.449724224769707,0,0.241177159752417,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,9.23765950833023,1.32643988239339,1.14075483509418,1.18821560042632,1.64283173801951,1.34005005953453,1.19021820443007,2.53673742215138,6.30540576424764,4.4292937929755,4.78364305972461,7.865439106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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19739
|HGNC=
|MCL_coexpression_id=2594
|TSSclassifier=NA
|UniProt=O54828
|association_with_transcript=0bp_to_ENSMUST00000020920_5end
|cluster_id=chr11:109159435..109159456,-
|description=CAGE_peak_1_at_Rgs9_5end
|id=chr11:109159435..109159456,-
|ontology_enrichment_celltype=CL:0000540!1.00e-07!33;CL:0000047!1.00e-07!33;CL:0000031!1.00e-07!33;CL:0000404!1.00e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000540,3.15e-08,33;CL:0000047,3.15e-08,33;CL:0000031,3.15e-08,33;CL:0000404,3.15e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.90e-18!71;UBERON:0003075!3.90e-18!71;UBERON:0007284!3.90e-18!71;UBERON:0004121!2.52e-16!102;UBERON:0000924!2.52e-16!102;UBERON:0006601!2.52e-16!102;UBERON:0003056!4.15e-16!49;UBERON:0000033!4.48e-16!63;UBERON:0001017!2.78e-15!73;UBERON:0005743!2.78e-15!73;UBERON:0000073!1.39e-14!75;UBERON:0001016!1.39e-14!75;UBERON:0001049!3.48e-13!52;UBERON:0005068!3.48e-13!52;UBERON:0006241!3.48e-13!52;UBERON:0007135!3.48e-13!52;UBERON:0000955!7.04e-12!50;UBERON:0006238!7.04e-12!50;UBERON:0003080!1.23e-11!40;UBERON:0002616!2.15e-11!49;UBERON:0002780!4.23e-11!39;UBERON:0001890!4.23e-11!39;UBERON:0006240!4.23e-11!39;UBERON:0000153!8.98e-11!94;UBERON:0007811!7.20e-09!86;UBERON:0002020!1.73e-08!34
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.03e-19,64;UBERON:0003075,1.03e-19,64;UBERON:0007284,1.03e-19,64;UBERON:0003056,2.87e-17,49;UBERON:0010371,6.83e-16,73;UBERON:0001017,1.14e-15,73;UBERON:0004121,7.24e-15,95;UBERON:0000924,7.24e-15,95;UBERON:0006601,7.24e-15,95;UBERON:0001016,1.71e-14,75;UBERON:0000073,1.73e-14,54;UBERON:0001049,6.63e-14,52;UBERON:0005068,6.63e-14,52;UBERON:0006241,6.63e-14,52;UBERON:0007135,6.63e-14,52;UBERON:0003080,1.96e-12,40;UBERON:0002780,7.44e-12,39;UBERON:0001890,7.44e-12,39;UBERON:0006240,7.44e-12,39;UBERON:0000955,1.43e-11,47;UBERON:0006238,1.43e-11,47;UBERON:0002616,4.65e-11,46;UBERON:0010314,1.40e-09,92;UBERON:0002020,4.94e-09,34;UBERON:0001894,4.86e-07,10;UBERON:0006222,4.86e-07,10;UBERON:0003528,9.42e-07,29;UBERON:0002791,9.42e-07,29;UBERON:0001893,9.42e-07,29
|phase1_expression=3.04282809499109,0,0,0.30246421130683,0,2.01455126294268,0.233612640595526,1.80772652818207,0.281577444303333,0.70219357896598,0.34243593645101,0.159544317990673,0,0,0,0,0,0.157731082679119,0,0,6.88850650223665,0,0,0.639969691173627,0.91763712426868,0.57423196411502,0,0.646413698057667,0,0.252030129759931,0,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0.629484089877886,0.304130793658544,0,0,0.436050312760893,0,0.58328969722285,0.279972843250725,0,0.838913030288682,1.45072428402269,0.336093799142464,0,0,0.515672092277442,4.04632921719196,4.23192783417626,1.90149421051854,0.338844532069132,0,0,0,0,0.898800331555214,0.768436610643109,1.65903379693564,1.4850653216486,1.26194976810829,6.56997264128748,5.07997644188711,1.46988959057945,1.0543001812006,2.75765635983006,8.8092704799511,3.57524546638526,2.4577045320999,5.80299666012853,7.22752384459036,3.64639359389732,3.90856198601933,5.6276261003168,5.80633341551878,5.89257170947335,11.6744778255264,4.65998614563251,0.681535739998656,0.529000920747499,0,0,0,0,0.649776417447669,0,1.40444420131752,0,0,0,3.94361575374705,0,0,0,0,0.253359865475099,0.505524445014783,1.37020655662872,2.84831672011889,1.92974780784272,1.73485326766136,2.43572382649713,2.30615497256059,2.41156224884196,2.4693628498498,0.628332956648377,0,0.433798070759735,0,0.485300549842228,0.441683036920787,0,0,1.46390398505774,0.628340120440365,2.81002760729451,0.239630249011841,0,0,8.68785708547972,173.392728468259,12.5654352112864,14.2535942557667,17.6443665557928,23.0644729461112,63.1118513333577,2.44414473240759,7.58882520721567,35.8866316975818,93.225742157708,4.55421550369463,2.29902104433473,4.32149111532838,9.49440352365005,18.4378912700098,20.6263089658608,18.1781345645874,223.51971231851,4.52692785158969,9.26619792822314,5.27853372491847,2.19195732427575,5.56094498451196,2.089512999133,2.88094990971121,0.796137067273973,0,0,0.284163499395593,0.621377317606506,0.938104239924385,0.36012412292203,0.23674473558521,0.590292695242212,0.462801338662135,0.232533944750408,0.804820204198858,0.116765342367169,0.329119699826961,0,0.162137619091711,0,0.219550115291051,0.536825675041487,4.41608891984667,3.91037527041281,0,1.05780226665418,3.19932375802851,3.25131340604614,3.35055399437443,4.23535401709019,4.89231696458715,3.42406127002606,3.32170343081158,6.0938613247884,6.53471542880701,7.36138946552258,5.65395852645448,2.69645822596266,3.45820879799511,2.58883655230677,1.13800740571849,2.51346727741403,1.1270773567308,0.203651327845314,1.35766741017338,1.26244475802573,1.26473074248515,2.21415221969403,2.04098346193787,1.72756029490521,0.296452627087149,0.166845105716094,0,0.449724224769707,0,0.241177159752417,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,9.23765950833023,1.32643988239339,1.14075483509418,1.18821560042632,1.64283173801951,1.34005005953453,1.19021820443007,2.53673742215138,6.30540576424764,4.4292937929755,4.78364305972461,7.86543910635542,5.35323443784276,4.62876987460837,0,0,0.983528546038072,0.827810238914197,4.81651769963376,5.62616095642575,0.163934945376675,0,4.41711507182759,2.34263246577983,4.95473814785438,2.38968797952552,3.11918143715352,1.41538265394416,3.23848561339915,3.50707029493574,3.95287777946523,6.42642632843614,1.56134093729095,1.78065603667255,2.28041743095006,7.9185659026817,0,2.18502572539483,1.209294227859,1.32023555829129,2.06711325016541,3.3817866273832,2.84271122485043,2.54473610634254,2.85197902707777,2.52829406348653,0,0,40.8527526904546,3.06103859853227,3.49268446213437,5.35842587578981,16.4926417287314,16.0531935841863,18.9231373692439,28.0107753185431,0.23467170806371,1.0591603543191,5.07215315526412,0.65954501176592,0.968786560175433,1.08563264870681,0.596861720015682,0.656563598980245,4.66369338607761,4.26478194624172,1.36696704638282,0.206386867963223,0.740778109478847,0.565105371014073,0.546776910884101,0.457556346413045,2.03974115992626,1.25956307091292,1.52019971184866,2.86401185404534,1.26534397432454,2.64315307264903,1.29606408986162,2.29997125615916,2.40198820120795,2.42755823492677,2.89287095038676,1.57053565190418,2.20345454596048,1.86401793926078,0.56369293868419,0.747582730219894,0,3.11121901350476,1.29159823477731,0.506868376472335,0.469428954583016,0.13020438484395,0.209718688851422,0.241584120826006,0.576060012515731,0.316011120628178,4.05450430580328,6.26536838705446,3.63778304337826,1.25318686967237,0.993406773906324,0.721172697119813,0.590758108698309,0.605798699688886,0.685861259894999,0.806609481094724,0.194915761479505,0.192423683280659,0.467507608726276,0.226730383615211,0.221985953374065,0.0897138566094757,0,3.09103350451505,3.37828455812128,1.46521299413812,0.857473516316263,2.00628841614145,5.64751842617067,5.9842280745933,5.72895513439397,3.26521046453006,4.7955776383945,2.2661816921691,4.72515750162264,1.80128481289688,6.34399372577886,3.10656187051092,1.86817225651518,1.59609949360412,2.56100408631201,2.43106717068294,2.30574478890781,1.83843508450014,3.77819437262746,3.5025959730612,2.56735367673452,3.03236654116557,2.5347929989024,3.58390048633545,3.46473577638565,2.4969809437899,2.81433797882505,1.90517476513229,3.36064545240081,2.70072908649187,2.06042950401653,3.23837624295674,2.40008476669791,3.19456451086807,2.86123427936785,2.18019624948493,2.82328141245992,3.46919892355874,4.024415403201,1.57841826862706,3.53090695999241,2.24456908663095,2.84724043498018,2.1670986122624,3.6830793885272,3.56354734727722,2.70069255373598,2.49810577937946,2.33931608445408,2.57845264857958,1.72159498861959,2.20591419119516,0.927471342481686
|short_description=p1@Rgs9
}}

Latest revision as of 21:25, 26 September 2015

Short description:p1@Rgs9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rgs9_5end
Coexpression cluster:MCL_coexpression_mm9:2594
Association with transcript: 0bp_to_ENSMUST00000020920_5end
EntrezGene:Rgs9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rgs9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.04
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C34.05
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.08
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.58
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.80
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.23
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.81
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.89
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.67
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.66
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.94
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H92.85
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F52.41
adrenal gland, neonate N00.CNhs11191.1311-23C12.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A48.69
corpus striatum, adult.CNhs10487.19-21D8173.39
corpus striatum, neonate N00.CNhs11226.630-43F112.57
cortex, adult.CNhs10473.12-14D514.25
cortex, neonate N30.CNhs11107.1392-42F217.64
diencephalon, adult.CNhs10482.20-12F223.06
diencephalon, neonate N30.CNhs11201.1388-42B263.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.44
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.59
epididymis, adult.CNhs10490.58-23B235.89
eyeball, adult.CNhs10484.31-12G493.23
eyeball, embryo E12.CNhs11016.345-16C64.55
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C94.32
eyeball, embryo E17.CNhs11023.1261-18D49.49
eyeball, neonate N00.CNhs11207.633-15C618.44
eyeball, neonate N01.CNhs11140.1532-43E720.63
eyeball, neonate N02.CNhs11205.1551-44G818.18
eyeball, neonate N16.CNhs11188.777-19A2223.52
forelimb, embryo E11.CNhs10596.335-25E24.53
forelimb, embryo E12.CNhs10600.359-14H29.27
forelimb, embryo E13.CNhs10589.384-1E25.28
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E75.56
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E84.42
hippocampus, neonate N00.CNhs11228.627-43G13.91
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I53.20
intestine, embryo E13.CNhs11010.381-16D53.25
intestine, embryo E15.CNhs10602.976-16D83.35
intestine, embryo E16.CNhs10585.463-22H44.24
intestine, embryo E17.CNhs10582.482-18D34.89
intestine, embryo E18.CNhs10526.1289-20F73.42
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E96.09
intestine, neonate N06.CNhs11102.688-20B86.53
intestine, neonate N07.CNhs11095.720-20F27.36
intestine, neonate N10.CNhs11098.755-23A55.65
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E33.46
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F82.51
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G71.26
kidney, neonate N10.CNhs11206.758-6D51.26
kidney, neonate N20.CNhs11113.832-19I12.21
kidney, neonate N25.CNhs11122.1353-25F32.04
kidney, neonate N30.CNhs11203.1385-42H11.73
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B19.24
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C62.54
lung, neonate N06.CNhs11212.683-20E56.31
lung, neonate N07.CNhs11111.715-19A34.43
lung, neonate N10.CNhs11219.750-23E64.78
lung, neonate N20.CNhs11109.822-18A47.87
lung, neonate N25.CNhs11119.1359-25C75.35
lung, neonate N30.CNhs11133.1394-42H24.63
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C24.82
medulla oblongata, neonate N30.CNhs11200.1396-42A35.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.95
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I96.43
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G67.92
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G840.85
pituitary gland, embryo E12.CNhs11018.346-16E63.06
pituitary gland, embryo E13.CNhs11009.370-44C73.49
pituitary gland, embryo E14.CNhs11037.398-44A55.36
pituitary gland, embryo E15.CNhs10592.427-16B916.49
pituitary gland, embryo E16.CNhs11036.449-43F616.05
pituitary gland, embryo E17.CNhs11039.1265-44F518.92
pituitary gland, neonate N00.CNhs11190.1308-22E928.01
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F85.07
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H31.09
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I14.66
spinal cord, adult.CNhs10505.24-13C94.26
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.52
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G82.64
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B82.43
stomach, neonate N07.CNhs11210.718-18A92.89
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I12.20
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G53.11
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I44.05
thymus, embryo E15.CNhs11005.430-45I26.27
thymus, embryo E16.CNhs11002.456-26C53.64
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E43.09
uterus, adult pregnant day19.CNhs10497.590-15F53.38
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I81.87
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.36
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.56
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron3.15e-0833
neuronal stem cell3.15e-0833
neuroblast3.15e-0833
electrically signaling cell3.15e-0833

Uber anatomy
Ontology termp-valuen
neurectoderm1.03e-1964
neural plate1.03e-1964
presumptive neural plate1.03e-1964
pre-chordal neural plate2.87e-1749
ecto-epithelium6.83e-1673
central nervous system1.14e-1573
ectoderm-derived structure7.24e-1595
ectoderm7.24e-1595
presumptive ectoderm7.24e-1595
nervous system1.71e-1475
regional part of nervous system1.73e-1454
neural tube6.63e-1452
neural rod6.63e-1452
future spinal cord6.63e-1452
neural keel6.63e-1452
anterior neural tube1.96e-1240
regional part of forebrain7.44e-1239
forebrain7.44e-1239
future forebrain7.44e-1239
brain1.43e-1147
future brain1.43e-1147
regional part of brain4.65e-1146
structure with developmental contribution from neural crest1.40e-0992
gray matter4.94e-0934
diencephalon4.86e-0710
future diencephalon4.86e-0710
brain grey matter9.42e-0729
regional part of telencephalon9.42e-0729
telencephalon9.42e-0729
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