FFCP PHASE1:Hg19::chr2:88124475..88124516,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=7415 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=14bp_to_ENST00000435212_5end | |||
|cluster_id=chr2:88124475..88124516,+ | |||
|coexpression_cluster_id=C180 | |||
|description=CAGE_peak_1_at_MT-ATP8_5end | |||
|id=chr2:88124475..88124516,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.25e-14!239;DOID:162!3.05e-14!235;DOID:305!1.74e-08!106;DOID:0050687!1.22e-07!143;DOID:0050686!1.83e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.76e-13!57;UBERON:0005068!4.76e-13!57;UBERON:0006241!4.76e-13!57;UBERON:0007135!4.76e-13!57;UBERON:0001017!1.92e-10!82;UBERON:0003080!2.47e-10!42;UBERON:0002780!4.32e-10!41;UBERON:0001890!4.32e-10!41;UBERON:0006240!4.32e-10!41;UBERON:0005743!1.58e-09!86;UBERON:0002616!2.69e-09!59;UBERON:0007023!3.20e-09!115;UBERON:0000955!1.14e-08!69;UBERON:0006238!1.14e-08!69;UBERON:0002020!1.21e-08!34;UBERON:0003528!1.21e-08!34;UBERON:0000073!1.27e-08!94;UBERON:0001016!1.27e-08!94;UBERON:0002791!1.80e-07!33;UBERON:0001893!2.04e-07!34;UBERON:0003075!3.11e-07!86;UBERON:0007284!3.11e-07!86;UBERON:0002619!4.08e-07!22;UBERON:0001869!4.36e-07!32;UBERON:0002346!6.20e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.19e-09;34!UBERON:0002020;1.19e-09;34!UBERON:0002780;1.63e-09;41!UBERON:0001890;1.63e-09;41!UBERON:0000073;1.99e-09;53!UBERON:0002616;1.99e-09;53!UBERON:0002791;3.59e-09;32!UBERON:0002619;1.58e-08;22!UBERON:0001869;3.53e-08;32!UBERON:0000956;1.33e-07;25!UBERON:0000203;1.33e-07;25!UBERON:0001893;1.43e-07;34!UBERON:0001950;4.38e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.05e-15,56;UBERON:0005068,6.05e-15,56;UBERON:0006241,6.05e-15,56;UBERON:0007135,6.05e-15,56;UBERON:0000073,2.85e-13,53;UBERON:0002616,2.85e-13,53;UBERON:0002780,5.53e-12,41;UBERON:0001890,5.53e-12,41;UBERON:0003080,5.53e-12,41;UBERON:0006240,5.53e-12,41;UBERON:0001017,3.09e-11,81;UBERON:0003528,7.09e-11,34;UBERON:0002020,7.09e-11,34;UBERON:0001016,1.46e-09,89;UBERON:0002791,1.70e-09,32;UBERON:0003075,1.78e-09,82;UBERON:0007284,1.78e-09,82;UBERON:0002346,4.82e-09,86;UBERON:0000955,6.07e-09,68;UBERON:0006238,6.07e-09,68;UBERON:0007023,8.12e-09,114;UBERON:0001893,1.85e-08,34;UBERON:0001869,2.43e-08,32;UBERON:0010371,3.21e-08,104;UBERON:0002619,6.78e-08,22;UBERON:0000956,5.30e-07,25;UBERON:0000203,5.30e-07,25 | |||
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| |||
|short_description=p1@MT-ATP8 | |||
}} |
Latest revision as of 20:20, 18 September 2015
Short description: | p1@MT-ATP8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MT-ATP8_5end |
Coexpression cluster: | C180_skeletal_heart_Hepatocyte_acute_occipital_hippocampus_middle |
Association with transcript: | 14bp_to_ENST00000435212_5end |
EntrezGene: | NA |
HGNC: | 7415 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 6.05e-15 | 56 |
neural rod | 6.05e-15 | 56 |
future spinal cord | 6.05e-15 | 56 |
neural keel | 6.05e-15 | 56 |
regional part of nervous system | 2.85e-13 | 53 |
regional part of brain | 2.85e-13 | 53 |
regional part of forebrain | 5.53e-12 | 41 |
forebrain | 5.53e-12 | 41 |
anterior neural tube | 5.53e-12 | 41 |
future forebrain | 5.53e-12 | 41 |
central nervous system | 3.09e-11 | 81 |
brain grey matter | 7.09e-11 | 34 |
gray matter | 7.09e-11 | 34 |
nervous system | 1.46e-09 | 89 |
regional part of telencephalon | 1.70e-09 | 32 |
neural plate | 1.78e-09 | 82 |
presumptive neural plate | 1.78e-09 | 82 |
neurectoderm | 4.82e-09 | 86 |
brain | 6.07e-09 | 68 |
future brain | 6.07e-09 | 68 |
adult organism | 8.12e-09 | 114 |
telencephalon | 1.85e-08 | 34 |
cerebral hemisphere | 2.43e-08 | 32 |
ecto-epithelium | 3.21e-08 | 104 |
regional part of cerebral cortex | 6.78e-08 | 22 |
cerebral cortex | 5.30e-07 | 25 |
pallium | 5.30e-07 | 25 |