FFCP PHASE1:Hg19::chr2:9893381..9893396,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:9893381..9893396,- | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr2:9893381..9893396,- | |||
|id=chr2:9893381..9893396,- | |||
|ontology_enrichment_celltype=CL:0000860!2.82e-58!45;CL:0002057!1.94e-57!42;CL:0002009!3.40e-42!65;CL:0002194!2.15e-41!63;CL:0000576!2.15e-41!63;CL:0000040!2.15e-41!63;CL:0000559!2.15e-41!63;CL:0000766!2.12e-38!76;CL:0000557!1.57e-37!71;CL:0000839!5.46e-36!70;CL:0002087!2.01e-35!119;CL:0000738!1.30e-33!140;CL:0002031!2.33e-30!124;CL:0000988!6.08e-25!182;CL:0000037!4.10e-24!172;CL:0000566!4.10e-24!172;CL:0000763!3.62e-23!112;CL:0000049!3.62e-23!112;CL:0002032!2.47e-22!165;CL:0000837!2.47e-22!165;CL:0002393!4.22e-17!9;CL:0002397!4.22e-17!9;CL:0000080!7.92e-11!6;CL:0000034!6.05e-10!444;CL:0000723!6.64e-10!436;CL:0000134!1.26e-09!358;CL:0000048!2.78e-09!430;CL:0002320!4.22e-09!365;CL:0000144!1.47e-08!625;CL:0000219!9.90e-08!390;CL:0002371!9.98e-08!591;CL:0000012!1.36e-07!682;CL:0000767!3.51e-07!3;CL:0000548!3.80e-07!679;CL:0000004!3.80e-07!679;CL:0000255!3.80e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.04e-45;33!CL:0002057;1.04e-45;33!CL:0000576;4.89e-32;48!CL:0000473;8.13e-31;39!CL:0000234;8.13e-31;39!CL:0000766;5.86e-26;69!CL:0000767;2.61e-21;3!CL:0002393;1.36e-11;6!CL:0002397;1.36e-11;6!CL:0000226;5.94e-10;3!CL:0000842;5.94e-10;3!CL:0002087;1.01e-09;104!CL:0000763;2.86e-09;100!CL:0000094;2.52e-08;8!CL:0000511;4.40e-08;1!CL:0002625;4.40e-08;1!CL:0000216;4.40e-08;1!CL:0000738;8.36e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.89e-62,42;CL:0002057,2.89e-62,42;CL:0000473,5.11e-54,48;CL:0000234,5.11e-54,48;CL:0000766,5.42e-46,72;CL:0002009,1.80e-45,61;CL:0002194,1.83e-42,59;CL:0000576,1.83e-42,59;CL:0000040,1.83e-42,59;CL:0000559,1.83e-42,59;CL:0000557,4.10e-41,67;CL:0000839,1.24e-37,66;CL:0000763,2.37e-32,108;CL:0000049,2.37e-32,108;CL:0000738,9.74e-30,136;CL:0002087,7.78e-25,115;CL:0000037,2.99e-23,168;CL:0000988,7.61e-22,177;CL:0002031,2.31e-21,120;CL:0000767,3.83e-21,3;CL:0002032,2.44e-20,161;CL:0000837,2.44e-20,161;CL:0002393,6.55e-13,9;CL:0002397,6.55e-13,9;CL:0000226,4.12e-10,3;CL:0000842,4.12e-10,3;CL:0000134,1.31e-08,354;CL:0002320,2.38e-08,361;CL:0000094,2.90e-08,8;CL:0000511,3.33e-08,1;CL:0002625,3.33e-08,1;CL:0000216,3.33e-08,1;CL:0000034,1.47e-07,441;CL:0000219,1.96e-07,386;CL:0000723,6.30e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;3.12e-44;42!CL:0000049;7.67e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.68e-34!102;UBERON:0003061!7.68e-34!102;UBERON:0002371!1.53e-33!80;UBERON:0001474!2.78e-30!86;UBERON:0002193!1.78e-29!112;UBERON:0004765!3.24e-25!101;UBERON:0001434!3.24e-25!101;UBERON:0002405!1.97e-20!115;UBERON:0003081!2.73e-18!216;UBERON:0002204!5.62e-18!167;UBERON:0002384!2.15e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;4.40e-08;1!UBERON:0001343;4.40e-08;1!UBERON:0004910;4.40e-08;1!UBERON:0004813;4.40e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.55e-36,76;UBERON:0001474,5.69e-33,82;UBERON:0002390,6.90e-33,98;UBERON:0003061,6.90e-33,98;UBERON:0004765,1.01e-29,90;UBERON:0002193,1.75e-29,108;UBERON:0002405,1.20e-28,93;UBERON:0001434,2.19e-26,100;UBERON:0003081,3.05e-15,203;UBERON:0002204,2.96e-14,167;UBERON:0000926,3.08e-08,315;UBERON:0004120,3.08e-08,315;UBERON:0006603,3.08e-08,315;UBERON:0001136,3.33e-08,1;UBERON:0001343,3.33e-08,1;UBERON:0004910,3.33e-08,1;UBERON:0005154,3.33e-08,1;UBERON:0005295,3.33e-08,1;UBERON:0004813,3.33e-08,1;UBERON:0005297,3.33e-08,1;UBERON:0005294,3.33e-08,1;UBERON:0010141,3.33e-08,1;UBERON:0005891,3.33e-08,1;UBERON:0002384,5.38e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0.0787107813136792,3.93364276848904,1.15148819429164,1.23852898652861,0.919421224478927,0,0,0,0,0,20.4978301156795,8.42286679374595,9.54847831149748,0,0,0,0.145398238779565,0,0.242584061187816,1.16214518452842,1.23350366406548,0.619412741790207,0.863077176966451,1.7931249457037,2.12834006899727,1.37898272294647,0,1.35426486594342,0.564727018627814,0,0.449446968890169,2.14258724659632,2.24650318953266,0,0.329851300186716,0.997318288108159,0.426224750532694,3.77272010217159,3.40431134814684,1.86846674698672,1.25624332628372,1.5644487552606,2.82345498116652,0.605399502633369,2.20966581592539,3.16462387440884,0.422510572623884,0.850417199860174,0.419317291016752,0.786300418025466,0.300353785683013,0,1.14005097496499,0.19891667719909,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,2.24203425192614,0,0,0.393010762749165,0.411202997999018,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0.364295288292542,0,0.324547393654683,0,0,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,1.72571360654893,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0,0,0,0,0.107420244868274,0,0,0,0,0,0.127612712494584,0,0,0,0.6970372701606,0.616067160352178,0.532306030317022,0.869932992075073,0,0,0,0,0,0.255897791311334,0,0.95460974377781,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445773537109913,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.370691816839509,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0.0967563312890851,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32140586367385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0.358177682162975,0,0.219284049578707,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:9893381..9893396,- | |||
}} |
Latest revision as of 13:30, 29 July 2015
Short description: | p@chr2:9893381..9893396, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:9893381..9893396, - |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.55e-36 | 76 |
bone element | 5.69e-33 | 82 |
hematopoietic system | 6.90e-33 | 98 |
blood island | 6.90e-33 | 98 |
skeletal element | 1.01e-29 | 90 |
hemolymphoid system | 1.75e-29 | 108 |
immune system | 1.20e-28 | 93 |
skeletal system | 2.19e-26 | 100 |
lateral plate mesoderm | 3.05e-15 | 203 |
musculoskeletal system | 2.96e-14 | 167 |
mesoderm | 3.08e-08 | 315 |
mesoderm-derived structure | 3.08e-08 | 315 |
presumptive mesoderm | 3.08e-08 | 315 |
mesothelium | 3.33e-08 | 1 |
seminiferous tubule of testis | 3.33e-08 | 1 |
epithelium of male gonad | 3.33e-08 | 1 |
epithelial cord | 3.33e-08 | 1 |
sex cord | 3.33e-08 | 1 |
seminiferous tubule epithelium | 3.33e-08 | 1 |
testis sex cord | 3.33e-08 | 1 |
genital ridge | 3.33e-08 | 1 |
primitive sex cord of indifferent gonad | 3.33e-08 | 1 |
coelomic epithelium | 3.33e-08 | 1 |
connective tissue | 5.38e-08 | 371 |