FFCP PHASE1:Hg19::chr3:115509849..115509867,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:115509849..115509867,+ | |||
|coexpression_cluster_id=C4270 | |||
|description=CAGE_peak_at_chr3:115509849..115509867,+ | |||
|id=chr3:115509849..115509867,+ | |||
|ontology_enrichment_celltype=CL:0000243!4.14e-10!15;CL:0000125!4.14e-10!15;CL:0000030!4.14e-10!15;CL:0000339!4.14e-10!15;CL:0000095!9.95e-09!17;CL:0000123!9.95e-09!17;CL:0000128!3.17e-07!7;CL:0000126!3.17e-07!7;CL:0000127!3.17e-07!7;CL:0002453!3.17e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002178;2.04e-11;3!CL:0000319;1.88e-09;1!CL:0002379;6.21e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.94e-11,3;CL:0000319,1.74e-09,1;CL:0002379,3.58e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0003099;6.21e-09;1!UBERON:0003852;6.21e-09;1 | |||
|ontology_enrichment_disease=DOID:305!5.97e-14!106;DOID:0050687!4.72e-11!143;DOID:14566!5.83e-11!239;DOID:7!1.44e-10!39;DOID:162!1.95e-10!235;DOID:1749!7.27e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.17e-16;2!DOID:4929;3.76e-16;2!DOID:299;1.68e-14;25!DOID:3111;1.60e-09;1!DOID:3603;1.60e-09;1!DOID:3030;1.88e-09;1!DOID:5662;1.88e-09;1!DOID:3620;6.21e-09;1!DOID:3565;6.21e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.48e-16,2;DOID:4929,2.03e-16,2;DOID:299,1.43e-14,25;DOID:305,9.84e-14,106;DOID:3111,1.60e-09,1;DOID:3603,1.60e-09,1;DOID:3030,1.74e-09,1;DOID:0050687,1.84e-09,143;DOID:5662,1.89e-09,1;DOID:3620,3.58e-09,1;DOID:3565,3.58e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002394;2.76e-18;4!UBERON:0003928;2.76e-18;4!UBERON:0002294;4.98e-18;7!UBERON:0001173;4.98e-18;7!UBERON:0000058;1.10e-12;10!UBERON:0004913;6.21e-09;1!UBERON:0005705;6.21e-09;1!UBERON:0003703;6.21e-09;1!UBERON:0008193;6.21e-09;1!UBERON:0010912;6.21e-09;1!UBERON:0002514;6.21e-09;1!UBERON:0003457;6.21e-09;1!UBERON:0008907;6.21e-09;1!UBERON:0008001;6.21e-09;1!UBERON:0007213;6.21e-09;1!UBERON:0009891;6.21e-09;1!UBERON:0007914;6.21e-09;1!UBERON:0007375;6.21e-09;1!UBERON:0003323;6.21e-09;1!UBERON:0010258;6.21e-09;1!UBERON:0005253;6.21e-09;1!UBERON:0007842;6.21e-09;1!UBERON:0002397;6.21e-09;1!UBERON:0003113;6.21e-09;1!UBERON:0003277;6.21e-09;1!UBERON:0001709;6.21e-09;1!UBERON:0001174;6.21e-09;1!UBERON:0004914;6.21e-09;1!UBERON:0002244;6.21e-09;1!UBERON:0005620;6.21e-09;1!UBERON:0010364;6.21e-09;1!UBERON:0004288;6.21e-09;1!UBERON:0002423;1.10e-07;25!UBERON:0000945;3.46e-07;5!UBERON:0010039;3.46e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002294,5.55e-14,9;UBERON:0001173,5.55e-14,9;UBERON:0004912,5.55e-14,9;UBERON:0002394,2.23e-12,6;UBERON:0003928,2.23e-12,6;UBERON:0000058,4.90e-10,19;UBERON:0005705,5.75e-09,1;UBERON:0008193,5.75e-09,1;UBERON:0010912,5.75e-09,1;UBERON:0002514,5.75e-09,1;UBERON:0003457,5.75e-09,1;UBERON:0008907,5.75e-09,1;UBERON:0008001,5.75e-09,1;UBERON:0007213,5.75e-09,1;UBERON:0009891,5.75e-09,1;UBERON:0007914,5.75e-09,1;UBERON:0009292,5.75e-09,1;UBERON:0003099,5.75e-09,1;UBERON:0007375,5.75e-09,1;UBERON:0003323,5.75e-09,1;UBERON:0010258,5.75e-09,1;UBERON:0007842,5.75e-09,1;UBERON:0009494,5.75e-09,1;UBERON:0010042,5.75e-09,1;UBERON:0010045,5.75e-09,1;UBERON:0010259,5.75e-09,1;UBERON:0010359,5.75e-09,1;UBERON:0009526,5.75e-09,1;UBERON:0002397,5.75e-09,1;UBERON:0003113,5.75e-09,1;UBERON:0003277,5.75e-09,1;UBERON:0001709,5.75e-09,1;UBERON:0004066,5.75e-09,1;UBERON:0002244,5.75e-09,1;UBERON:0005620,5.75e-09,1;UBERON:0004362,5.75e-09,1;UBERON:0010364,5.75e-09,1;UBERON:0010046,5.75e-09,1;UBERON:0005868,5.75e-09,1;UBERON:0007238,5.75e-09,1;UBERON:0004288,5.75e-09,1;UBERON:0004068,5.75e-09,1;UBERON:0010334,5.75e-09,1;UBERON:0003852,5.75e-09,1;UBERON:0010253,5.75e-09,1;UBERON:0004913,6.22e-09,1;UBERON:0003703,6.22e-09,1;UBERON:0001174,6.22e-09,1;UBERON:0004914,6.22e-09,1;UBERON:0007499,1.01e-07,25;UBERON:0009497,1.20e-07,25;UBERON:0000015,1.20e-07,25;UBERON:0002423,1.20e-07,25;UBERON:0006235,1.20e-07,25;UBERON:0004161,1.20e-07,25;UBERON:0009856,2.03e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0.331397375727916,0,0,0,0,0.369363174230364,0.408001382488506,0,0.286235987131057,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.283604451492204,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0.250237039743928,0,0,0,0.150238058906597,0.226864366320042,0.717558542755448,0,0,1.50045548042201,0.824420233907511,0,0,0.843881661206331,0.0974370051611986,1.00973509697646,0,0,1.77504796258307,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,1.44331342025273,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,1.14861935834114,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0.553107505625109,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422206515571503,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0.386682873168488,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0.636406495851874,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.71623345421307,0,0,0,0,0.111308705022906,0.16480387422676,0,0,0,0,0.920418142519393,0,0,4.40354920621902,4.65455054156584,0,0,0,0,0,0,0,0,0,0,0.1137934482855,1.77977555204936,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0.586993856796269,0,0,0,0,0.063186579628488,0.450970258243478,0.207376382794494,0.664653872707185,0,0,0,0,0.277349346026277,0,0.293977192243133,0.34823682632161,0,0,1.25783230675811,0.803982487948041,1.14961639874493,0,0,0,0.548167698587004,0.19871461170299,0,0,1.04206466326994,0.85381197895741,0,1.44090417154106,0,0,0.288109595976299,0.869767748958028,0,0.543616824294456,0.732219924186332,0,0.866851769704557,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0.315132729228895,0.247247575143499,0.471824806979294,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0.684347351537318,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0.124980407962107,0,0,1.88212655758537,0,0,0.597019211547496,0,0,0,0.754703705257725,0,0,0.151230923763239,0.777186002913902,0.295710299979268,0.477890301491107,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0,0.644463342254931,0,0,0,0.343395705182793,0,0,0,0,0.260994291965212,0,0.231522474323834,0,0.537266523244462,0,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,5.89854981008926,12.6787274015176,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,1.41070377476274,0,0,0,0,0,0,0,0,0,0.490738592505128,0.353909170043221,0.183428598521679,2.65709032145778,0,0.690359926060101,0,0,0.40341013740704,0,0,0,1.33070477595341,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,5.48761630199739,0,0,0.118193840883968,0.556157009460346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.511280428554946,0,0,0.31020638566432,0,0,5.10381214799263,1.21917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0.352894871715692,0.240724100067505,0,0,0,0,0,0,0,1.11598505450025,0.462175628631418,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,2.13050538903166,0,0,0,0,0,0.143444410785353,0.332660356546013,0,0.213454691755431,0,1.97615444634491,0,0,0,0,0,0 | |||
|short_description=p@chr3:115509849..115509867,+ | |||
}} |
Latest revision as of 14:36, 29 July 2015
Short description: | p@chr3:115509849..115509867, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:115509849..115509867, + |
Coexpression cluster: | C4270_mucinous_pleomorphic_signet_thyroid_bile_oral_tubular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.94e-11 | 3 |
mucus secreting cell | 1.74e-09 | 1 |
meningothelial cell | 3.58e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.48e-16 | 2 |
tubular adenocarcinoma | 2.03e-16 | 2 |
adenocarcinoma | 1.43e-14 | 25 |
carcinoma | 9.84e-14 | 106 |
cystadenocarcinoma | 1.60e-09 | 1 |
mucinous cystadenocarcinoma | 1.60e-09 | 1 |
mucinous adenocarcinoma | 1.74e-09 | 1 |
cell type cancer | 1.84e-09 | 143 |
pleomorphic carcinoma | 1.89e-09 | 1 |
central nervous system cancer | 3.58e-09 | 1 |
meningioma | 3.58e-09 | 1 |