FFCP PHASE1:Hg19::chr3:126242976..126243008,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=166012 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21755 | |||
|TSSclassifier=strong | |||
|UniProt=Q8NET6 | |||
|association_with_transcript=-117bp_to_ENST00000319340_5end | |||
|cluster_id=chr3:126242976..126243008,+ | |||
|coexpression_cluster_id=C4278 | |||
|description=CAGE_peak_1_at_CHST13_5end | |||
|id=chr3:126242976..126243008,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.19e-35!76;CL:0000557!8.74e-30!71;CL:0002194!2.27e-29!63;CL:0000576!2.27e-29!63;CL:0000040!2.27e-29!63;CL:0000559!2.27e-29!63;CL:0000839!5.23e-29!70;CL:0002009!7.91e-28!65;CL:0000763!3.88e-26!112;CL:0000049!3.88e-26!112;CL:0002057!1.38e-21!42;CL:0000860!3.47e-19!45;CL:0000738!2.98e-15!140;CL:0000988!4.83e-15!182;CL:0000037!6.58e-15!172;CL:0000566!6.58e-15!172;CL:0002032!2.63e-13!165;CL:0000837!2.63e-13!165;CL:0002087!2.55e-12!119;CL:0002031!1.70e-11!124;CL:0002393!3.62e-08!9;CL:0002397!3.62e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000766;9.35e-18;69!CL:0000235;9.32e-14;6!CL:0000576;2.33e-13;48!CL:0000094;1.05e-11;8!CL:0002393;1.29e-11;6!CL:0002397;1.29e-11;6!CL:0000473;1.56e-10;39!CL:0000234;1.56e-10;39!CL:0000763;3.56e-10;100!CL:0000182;3.58e-09;12!CL:0000081;3.35e-08;11!CL:0002619;1.05e-07;3!CL:0000775;3.87e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.13e-40,72;CL:0000763,2.20e-32,108;CL:0000049,2.20e-32,108;CL:0000557,2.02e-31,67;CL:0000839,4.51e-30,66;CL:0002194,5.19e-28,59;CL:0000576,5.19e-28,59;CL:0000040,5.19e-28,59;CL:0000559,5.19e-28,59;CL:0002009,8.57e-27,61;CL:0000473,2.10e-21,48;CL:0000234,2.10e-21,48;CL:0000988,4.13e-19,177;CL:0000037,6.39e-19,168;CL:0000738,6.99e-18,136;CL:0002032,2.59e-17,161;CL:0000837,2.59e-17,161;CL:0000235,8.49e-14,6;CL:0000860,3.06e-13,42;CL:0002057,3.06e-13,42;CL:0002393,8.01e-13,9;CL:0002397,8.01e-13,9;CL:0002031,3.70e-12,120;CL:0000094,8.01e-12,8;CL:0002087,6.43e-11,115;CL:0000182,3.54e-09,12;CL:0000081,2.77e-08,11;CL:0002619,1.02e-07,3;CL:0000775,3.64e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.77e-10;42!CL:0000049;2.46e-09;108!UBERON:0004161;1.45e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.14e-31!102;UBERON:0003061!1.14e-31!102;UBERON:0002193!1.97e-27!112;UBERON:0002371!2.45e-25!80;UBERON:0002405!3.40e-25!115;UBERON:0001474!8.36e-25!86;UBERON:0004765!7.06e-20!101;UBERON:0001434!7.06e-20!101;UBERON:0000178!3.28e-08!15;UBERON:0000179!3.28e-08!15;UBERON:0000463!3.28e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.36e-11;15!UBERON:0000179;8.36e-11;15!UBERON:0000463;8.36e-11;15!UBERON:0002107;7.72e-09;19!UBERON:0006925;7.72e-09;19!UBERON:0002390;4.69e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.91e-36,98;UBERON:0003061,5.91e-36,98;UBERON:0002193,2.29e-31,108;UBERON:0002371,2.41e-28,76;UBERON:0001474,1.72e-25,82;UBERON:0002405,1.51e-22,93;UBERON:0004765,2.77e-22,90;UBERON:0001434,5.19e-19,100;UBERON:0000178,1.02e-10,15;UBERON:0000179,1.02e-10,15;UBERON:0000463,1.02e-10,15;UBERON:0003081,1.07e-10,203;UBERON:0002107,7.67e-09,19;UBERON:0006925,7.67e-09,19;UBERON:0008836,7.67e-09,19;UBERON:0002204,4.14e-08,167;UBERON:0008835,2.36e-07,22;UBERON:0003894,2.36e-07,22;UBERON:0009854,6.04e-07,23 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0,1.96682138424452,1.15148819429164,3.2511385896376,0,0,0,0,0,6.16560922603179,1.10799081706375,4.01088894940283,3.68918480216948,16.3458296195145,4.53451132426571,7.98484259665978,2.18097358169347,3.77875943688809,0.242584061187816,1.39457422143411,1.6446715520873,0.619412741790207,1.43846196161075,0.768482119587302,0.236482229888585,1.37898272294647,1.29096936716765,0,0.564727018627814,0.818718450173537,0.674170453335254,0.612167784741805,0,0.639337125799041,0.659702600373432,0.797854630486527,0,0.870627715885752,0,0.622822248995575,1.00499466102697,1.0429658368404,0.217188844705117,0.605399502633369,0.368277635987565,0.316462387440884,2.74631872205524,1.91343869968539,2.09658645508376,5.61643155732475,2.55300717830561,3.69668849403284,1.14005097496499,0.59675003159727,1.82664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,5.28685314316103,1.68152568894461,4.74091352595139,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.255973222308837,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83370705696798,0.364295288292542,0,0.97364218096405,1.91542711029194,3.58986493400936,0.238490624305342,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.530119073285941,0.813357600086629,0.207322110030741,0.504641701751257,0.72995471815166,0,0,0,0,0,0.473227200159376,0.168584690078102,0.482022059766964,0.882351781859152,0.653638332277218,0.474541238222193,0.404493924480493,0.784885860501384,0.38474715694639,0,0,0.4115740113314,0,22.8159062679296,15.725235466842,10.6342183202653,0,11.4379247845096,0.343135620597051,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,13.0495013226321,4.21207677250628,5.94524649154913,0,0,0.141775097242386,0,0,0,0,0,6.21984346622316,7.35011762426503,9.97315224068402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,14.0631985600995,21.0833939483032,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0.773288812777695,0,0,2.24702107184155,5.9832291840805,4.55857064779639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.07857100409308,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3607882616125,0,0,0,0,0,0,0,1.56869953835371,0,0.211103257785751,0,0,0.215915916102139,0,0.541892875087706,0,0,0,0,0,0,0,0,0,9.58281408323817,0.0915694648183434,0.495056999523528,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.34321646058877,0,0,0,0,1.52234282769651,5.35246044999663,1.13929437434833,2.1440859791201,2.87953591160336,0,1.08006287447623,1.58625035258854,0,0,0.245040215981032,0,0,0,0,0,0.957526850661834,0,0,0,0,0,0,0,3.05117342697029,3.22879531505676,10.2203097045678,2.74804275804612,0.614481528616916,2.23676107892416,2.0021897005429,5.08009048045305,0,0,0,0,0,2.61996756571508,0.146508179271894,0.36408156524854,0,0,0,0.296964680832639,0,0,0,0,0,0,0.398495976502139,0,4.03092396566842,0,0,0,0,0.179021174675609,0,0,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0.32681539055697,0,0.0769502585037971,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0.156980256395025,0.332423363800313,0,0,0,0,0.794682894901893,0,0,9.04659657177221,0.216388639742091,0.995261931078505,0.796118080530053,7.94339188413713,0.296521128680622,1.35920332841153,1.25306339406546,0,0,0.234264445725339,0,0.19566461893209,0,0,6.04953580243319,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0,2.39771531498556,0,0.229073192331831,2.57392496792947,0,0.124252535565433,0.235694034616795,0,0,0,0,0,0.136905378891993,2.55493176133945,0,0,0.558564802544508,0,0,0,0,0,0,0,8.15471646692177,24.2652201506249,23.8181830721571,25.141521857611,0.196854963029498,0,0,0,0.803765742325096,1.78801267576404,1.66176135211674,0,0,0,0,1.02447419488958,3.25218446436988,0,0,0.191915197319445,0.714695326373367,0,0.76280561296425,0,0,0,0,0,0,0.339936274560377,18.0259247424041,51.6776866757663,0,0.13223260174269,0.342173675768659,0,0.533937062838473,0,0,0.992332043623902,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0.138348634936231,0,0,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0.358177682162975,0,0,0.176689145945881,0.192914038270915,0,1.02496607435179,0.345430341731199,0,0,0,0,0,0,0,0,0,0.853533837553127,0,0,0,0,0.622077260032973,0,0,0,0,0.848662649770126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0.147856086217045,0,0,0.20668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| |||
|short_description=p1@CHST13 | |||
}} |
Latest revision as of 04:23, 20 September 2015
Short description: | p1@CHST13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHST13_5end |
Coexpression cluster: | C4278_liver_Monocytederived_hepatocellular_Macrophage_Hepatocyte_CD14_small |
Association with transcript: | -117bp_to_ENST00000319340_5end |
EntrezGene: | CHST13 |
HGNC: | 21755 |
UniProt: | Q8NET6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.13e-40 | 72 |
myeloid cell | 2.20e-32 | 108 |
common myeloid progenitor | 2.20e-32 | 108 |
granulocyte monocyte progenitor cell | 2.02e-31 | 67 |
myeloid lineage restricted progenitor cell | 4.51e-30 | 66 |
monopoietic cell | 5.19e-28 | 59 |
monocyte | 5.19e-28 | 59 |
monoblast | 5.19e-28 | 59 |
promonocyte | 5.19e-28 | 59 |
macrophage dendritic cell progenitor | 8.57e-27 | 61 |
defensive cell | 2.10e-21 | 48 |
phagocyte | 2.10e-21 | 48 |
hematopoietic cell | 4.13e-19 | 177 |
hematopoietic stem cell | 6.39e-19 | 168 |
leukocyte | 6.99e-18 | 136 |
hematopoietic oligopotent progenitor cell | 2.59e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.59e-17 | 161 |
macrophage | 8.49e-14 | 6 |
classical monocyte | 3.06e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.06e-13 | 42 |
intermediate monocyte | 8.01e-13 | 9 |
CD14-positive, CD16-positive monocyte | 8.01e-13 | 9 |
hematopoietic lineage restricted progenitor cell | 3.70e-12 | 120 |
granulocyte | 8.01e-12 | 8 |
nongranular leukocyte | 6.43e-11 | 115 |
hepatocyte | 3.54e-09 | 12 |
blood cell | 2.77e-08 | 11 |
adult endothelial progenitor cell | 1.02e-07 | 3 |
neutrophil | 3.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.91e-36 | 98 |
blood island | 5.91e-36 | 98 |
hemolymphoid system | 2.29e-31 | 108 |
bone marrow | 2.41e-28 | 76 |
bone element | 1.72e-25 | 82 |
immune system | 1.51e-22 | 93 |
skeletal element | 2.77e-22 | 90 |
skeletal system | 5.19e-19 | 100 |
blood | 1.02e-10 | 15 |
haemolymphatic fluid | 1.02e-10 | 15 |
organism substance | 1.02e-10 | 15 |
lateral plate mesoderm | 1.07e-10 | 203 |
liver | 7.67e-09 | 19 |
digestive gland | 7.67e-09 | 19 |
liver bud | 7.67e-09 | 19 |
musculoskeletal system | 4.14e-08 | 167 |
hepatic diverticulum | 2.36e-07 | 22 |
liver primordium | 2.36e-07 | 22 |
digestive tract diverticulum | 6.04e-07 | 23 |