FFCP PHASE1:Hg19::chr3:29410900..29410910,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:29410900..29410910,+ | |||
|description=CAGE_peak_at_chr3:29410900..29410910,+ | |||
|id=chr3:29410900..29410910,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;8.67e-10;1!UBERON:0004874;1.03e-09;1!UBERON:0005062;5.73e-09;4!UBERON:0007284;5.73e-09;4!UBERON:0007123;1.91e-07;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;3.39e-09;1!DOID:6193;3.39e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,3.00e-09,1;DOID:6193,4.50e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.69e-11!115;UBERON:0000073!6.22e-10!94;UBERON:0001016!6.22e-10!94;UBERON:0000955!1.01e-08!69;UBERON:0006238!1.01e-08!69;UBERON:0001017!1.48e-08!82;UBERON:0005743!2.10e-08!86;UBERON:0001049!8.81e-08!57;UBERON:0005068!8.81e-08!57;UBERON:0006241!8.81e-08!57;UBERON:0007135!8.81e-08!57;UBERON:0002616!2.77e-07!59;UBERON:0003075!5.81e-07!86;UBERON:0007284!5.81e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0005090;3.24e-17;2!UBERON:0001630;3.24e-17;2!UBERON:0003978;1.15e-11;3!UBERON:0000946;1.15e-11;3!UBERON:0002114;1.15e-11;2!UBERON:0002426;9.43e-10;1!UBERON:0003831;9.43e-10;1!UBERON:0003898;9.43e-10;1!UBERON:0004830;9.43e-10;1!UBERON:0003830;9.43e-10;1!UBERON:0005175;9.43e-10;1!UBERON:0001774;9.43e-10;1!UBERON:0001103;9.43e-10;1!UBERON:0000989;1.03e-09;1!UBERON:0008811;1.03e-09;1!UBERON:0002146;1.49e-09;1!UBERON:0002171;1.49e-09;1!UBERON:0005623;1.49e-09;1!UBERON:0006518;1.49e-09;1!UBERON:0008949;1.49e-09;1!UBERON:0000101;1.49e-09;1!UBERON:0002167;1.49e-09;1!UBERON:0001000;3.39e-09;1!UBERON:0000996;3.39e-09;1!UBERON:0002135;3.39e-09;1!UBERON:0001389;3.39e-09;1!UBERON:0000026;3.39e-09;1!UBERON:0008784;3.39e-09;1!UBERON:0006058;3.39e-09;1!UBERON:0003663;3.39e-09;1!UBERON:0004256;3.39e-09;1!UBERON:0004708;3.39e-09;1!UBERON:0002101;3.39e-09;1!UBERON:0004709;3.39e-09;1!UBERON:0002529;3.39e-09;1!UBERON:0010538;3.39e-09;1!UBERON:0003661;3.39e-09;1!UBERON:0010890;3.39e-09;1!UBERON:0002471;3.39e-09;1!UBERON:0001383;3.39e-09;1!UBERON:0010758;3.39e-09;1!UBERON:0010707;3.39e-09;1!UBERON:0000978;3.39e-09;1!UBERON:0002103;3.39e-09;1!UBERON:0005352;3.39e-09;1!UBERON:0001665;3.39e-09;1!UBERON:0003823;3.39e-09;1!UBERON:0000154;3.39e-09;1!UBERON:0010709;3.39e-09;1!UBERON:0000922;3.46e-09;49!UBERON:0002046;1.91e-07;5!UBERON:0002108;2.43e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,2.07e-17,2;UBERON:0001630,2.07e-17,2;UBERON:0003978,8.36e-12,3;UBERON:0009751,8.36e-12,3;UBERON:0000946,8.36e-12,3;UBERON:0002523,8.36e-12,3;UBERON:0005983,8.36e-12,3;UBERON:0002165,8.36e-12,3;UBERON:0002062,8.36e-12,3;UBERON:0007280,8.36e-12,3;UBERON:0002114,1.29e-11,2;UBERON:0002426,9.44e-10,1;UBERON:0003831,9.44e-10,1;UBERON:0003898,9.44e-10,1;UBERON:0004830,9.44e-10,1;UBERON:0003830,9.44e-10,1;UBERON:0005175,9.44e-10,1;UBERON:0001774,9.44e-10,1;UBERON:0001103,9.44e-10,1;UBERON:0010084,9.44e-10,1;UBERON:0000989,1.03e-09,1;UBERON:0008811,1.03e-09,1;UBERON:0006258,1.03e-09,1;UBERON:0005876,1.03e-09,1;UBERON:0004874,1.03e-09,1;UBERON:0002146,1.32e-09,1;UBERON:0005623,1.32e-09,1;UBERON:0002171,1.56e-09,1;UBERON:0006518,1.56e-09,1;UBERON:0008949,1.56e-09,1;UBERON:0000101,1.56e-09,1;UBERON:0002167,1.56e-09,1;UBERON:0005418,2.16e-09,1;UBERON:0001389,2.16e-09,1;UBERON:0000026,2.16e-09,1;UBERON:0008784,2.16e-09,1;UBERON:0006058,2.16e-09,1;UBERON:0003663,2.16e-09,1;UBERON:0004256,2.16e-09,1;UBERON:0004708,2.16e-09,1;UBERON:0002101,2.16e-09,1;UBERON:0004709,2.16e-09,1;UBERON:0002529,2.16e-09,1;UBERON:0010538,2.16e-09,1;UBERON:0003661,2.16e-09,1;UBERON:0010890,2.16e-09,1;UBERON:0002471,2.16e-09,1;UBERON:0001383,2.16e-09,1;UBERON:0004357,2.16e-09,1;UBERON:0004347,2.16e-09,1;UBERON:0005420,2.16e-09,1;UBERON:0005732,2.16e-09,1;UBERON:0010758,2.16e-09,1;UBERON:0010707,2.16e-09,1;UBERON:0000978,2.16e-09,1;UBERON:0002103,2.16e-09,1;UBERON:0001665,2.16e-09,1;UBERON:0003823,2.16e-09,1;UBERON:0000154,2.16e-09,1;UBERON:0010709,2.16e-09,1;UBERON:0005733,2.16e-09,1;UBERON:0005730,2.16e-09,1;UBERON:0002135,2.35e-09,1;UBERON:0000996,2.55e-09,1;UBERON:0001000,3.83e-09,1;UBERON:0005352,3.83e-09,1;UBERON:0002046,1.83e-07,5;UBERON:0004117,1.83e-07,5;UBERON:0007689,1.83e-07,5;UBERON:0007123,1.83e-07,5;UBERON:0003091,1.83e-07,5;UBERON:0002108,2.59e-07,4 | |||
|phase1_expression=0,0,0.422863212287913,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94826728407911,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0.423863802319124,0.300091096084402,0.206105058476878,0,0,0.337552664482532,0,1.00973509697646,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.315404830067869,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920771839728375,0.280660094433074,0.256278298511402,0,0.321707842287215,0,0.154209693802656,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.082509499920588,0,0,0,0.193341436584244,0,0,0.137836572484531,0.429680979473094,0.290033387828457,0.170453254832202,0,0,0,1.02090169995667,0,0,0.62962469366128,0,0,0,0,0,0,0.372158369359667,0.632758849437452,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0.23874448473769,0,0,0,0.140669416410513,0.111308705022906,0,0,0.597743964753209,0,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0.520874984799877,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0.0769502585037971,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,5.61804353109152,0,0,0,0,1.18375320854817,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0.554698692052555,0,0,0.0870592065804026,0,1.0319161948297,0,0.219267951258557,0.0821154570532092,0,0.0882561266915003,0.677942222341597,0,0,0.189932387867636,0,0,0,0,0,0.458146384663663,0,0,0,0.471388069233591,0.135904206073614,0,0.101998217636322,0.288950589901519,0,0.136905378891993,0,0.429765441419957,0,1.67569440763353,2.7499250881402,0,0.199679000498991,0.429226048136571,0,0.134366944973453,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.157611414598396,0.0524545881349981,0,0,0.191915197319445,0.714695326373367,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.26446520348538,0,0,0.213574825135389,0,2.48543433208317,0,0,0.121792598380896,0,0,0.2506898940227,0,0,0,0,0,0.3755727921195,0,0.554645257684261,0,0,0.249960815924213,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0.147855149989634,0.159296767163702,0,0,0.414706207840855,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0.214441591374926,0,0.453411851024545,0.231522474323834,0.734210113519403,0,0,0.877136198314828,0,0.192914038270915,0,0,0.345430341731199,0.303859956177382,0.276516872303462,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0.127894371303652,0.323474434190045,0,1.31051565830417,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0.159633859057151,0,0.504143392443436,0,0,0,0,0,0,0,0.762764190934334,0,0,0.150420656698515,0.60511520611056,0,0,1.31017534008077,0,0,0,0,0,1.09394961803644,0,4.96211178389294,0,0,0.535701835878287,1.00885116665647,0,0.91064876540519,0,0,0.685952037749674,0.203909198930495,0.0657727735628491,0.118193840883968,0,0,0.157115589916002,0,2.73947616152849,0,0,0.285906176706625,0.158013611732727,0,0,0,0.414432328326074,0,0,0,0.118332000730565,0,0.423387050190929,0,0,0,0,0,0,1.94228651156368,0,0,0.971421986118279,0,0,0,0,0,0,0,0.437119121007915,0,0.980593287015622,0,0.196308467114945,0.297046400327086,0.8453114551668,0,0.0939839179798536,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0.143339583151451,2.20880187070458,0,1.30905207102113,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0.213233981900981,2.85677317756488,0,0.496597714366863,0.897054900644907,0.0636471582781649,10.9143282037438,0.217716747896961,0,0,0.0717222053926763,3.65926392200615,0,0,0,0,7.03922827210363,0,0.813792356631477,1.33151354837103,0.201273793591026,0 | |||
|short_description=p@chr3:29410900..29410910,+ | |||
}} |
Latest revision as of 20:20, 29 July 2015
Short description: | p@chr3:29410900..29410910, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:29410900..29410910, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 3.00e-09 | 1 |
epithelioid sarcoma | 4.50e-09 | 1 |