FFCP PHASE1:Mm9::chr13:30841099..30841116,+: Difference between revisions
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{{FFCP|EntrezGene=16364|HGNC=|MCL_coexpression_id=7|UniProt=Q64287|association_with_transcript=4bp_to_ENSMUST00000021784,ENSMUST00000110307_5end|description=CAGE_peak_1_at_Irf4_5end|id=chr13:30841099..30841116,+|ontology_enrichment_celltype=CL:0000838!1.37e-07!12;CL:0000791!2.75e-07!9;CL:0000789!2.75e-07!9;CL:0002420!2.75e-07!9;CL:0002419!2.75e-07!9;CL:0000790!2.75e-07!9;CL:0000084!6.52e-07!11;CL:0000827!6.52e-07!11|ontology_enrichment_celltype_v019_2=CL:0000791,2.09e-08,9;CL:0000789,2.09e-08,9;CL:0002420,2.09e-08,9;CL:0002419,2.09e-08,9;CL:0000790,2.09e-08,9;CL:0000838,5.08e-08,12;CL:0000624,1.16e-07,8;CL:0002031,1.52e-07,25;CL:0000084,3.17e-07,11;CL:0000827,3.17e-07,11;CL:0000542,5.05e-07,13;CL:0000051,5.05e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!8.91e-12!48;UBERON:0002405!5.71e-11!70;UBERON:0002390!3.96e-10!45;UBERON:0003061!3.96e-10!45;UBERON:0004177!2.09e-09!29;UBERON:0005057!4.17e-08!51;UBERON:0003408!2.33e-07!24;UBERON:0006562!3.16e-07!24;UBERON:0001557!3.16e-07!24;UBERON:0001042!3.16e-07!24;UBERON:0008814!3.16e-07!24;UBERON:0009145!3.16e-07!24;UBERON:0002370!6.89e-07!23;UBERON:0000974!6.89e-07!23;UBERON:0004807!6.89e-07!23;UBERON:0005058!6.89e-07!23;UBERON:0003351!6.89e-07!23;UBERON:0009113!6.89e-07!23;UBERON:0003295!6.89e-07!23;UBERON:0009722!6.89e-07!23;UBERON:0005562!6.89e-07!23;UBERON:0007690!6.89e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.05e-13,48;UBERON:0002405,1.05e-13,48;UBERON:0004177,7.46e-12,29;UBERON:0005057,7.46e-12,29;UBERON:0002390,9.72e-12,45;UBERON:0003061,9.72e-12,45;UBERON:0000077,1.20e-10,35;UBERON:0003408,2.29e-09,24;UBERON:0006562,3.37e-09,24;UBERON:0001557,3.37e-09,24;UBERON:0001042,3.37e-09,24;UBERON:0008814,3.37e-09,24;UBERON:0009145,3.37e-09,24;UBERON:0002370,8.69e-09,23;UBERON:0000974,8.69e-09,23;UBERON:0004807,8.69e-09,23;UBERON:0005058,8.69e-09,23;UBERON:0003351,8.69e-09,23;UBERON:0009113,8.69e-09,23;UBERON:0003295,8.69e-09,23;UBERON:0009722,8.69e-09,23;UBERON:0005562,8.69e-09,23;UBERON:0007690,8.69e-09,23;UBERON:0000072,2.93e-07,27;UBERON:0001004,6.31e-07,42;UBERON:0001041,7.32e-07,80|phase1_expression=0.320297694209588,0,1.36499771816861,0,0,0,0.467225281191051,79.6690905634526,3698.94209709074,3518.92608872485,1414.60285347912,1345.43723361534,20.8864890516071,17.3092396789615,38.9738421324325,38.4703008040669,6.99561878128147,164.513519234321,164.125977026069,116.28276459266,1.87095238332354,2.18440092641948,0.783599367416806,33.2784239410286,39.2289870624861,0,0,0,0.570070258369122,2.01624103807945,1.55211357458713,0,0,0,0,0,0.408338712524738,0,0.7813353445238,0.523523743973798,2.94115744015507,1.36609096991689,1.45653105909346,0,0.101376931219515,0,0,0,0.219686182734472,0.194429899074283,0,0,296.304082297962,48.5992635147601,42.011724892808,0,0.286533439938757,0,0,0.528990979272033,0,0,0,1.3498495759221,3.9554654502679,0,0,0.384218305321555,0.103689612308478,0.135005938331691,0,0,0.441737081903227,0,0,0,0,0,0.153606533256243,0.131886287730194,0,0,0.279182999001381,1.12552522006336,0.30559649555362,0,0.142371680799103,0,1.21161909333094,1.66257432234928,7.24661221754194,0,0.679971333707751,0,0,0,7.44355426698285,0,0,0,0,0,0,0,0,0,0,5.709193985953,150.960786166301,4.45326417194474,0.173485326766136,0.304465478312141,0.461230994512117,0,0.352766121407114,7.53999547978053,0,37.8850315130169,34.4998115260451,3.72063754879041,28.2677143629304,37.8202697445473,9.31958806090611,0.292780797011547,0,27.8448190177365,2.87556298814209,1.19980546198682,1.14363204365758,0.898743836428936,0,0.125654352112864,0,0,0.20778804455956,0,0.101839363850316,40.5566724188903,0,1.89397670297827,0,0,0.180062129805349,1.20563854268572,0.408218994907967,0.768682321709099,0.655912071918102,1.55222022443409,0,0,0.351902248327898,0.219195732427575,0,0.696504333044333,1.02891068203972,0.199034266818493,0,0.772043721344145,0.568326998791185,0,0,0,0,0,0.308534225774757,0,0.268273401399619,0.116765342367169,0.16455984991348,0.656669856316381,1.4592385718254,1.16959989940266,4.61055242111206,3.22095405024892,0.210289948564127,0,3.63460661282178,10.0491215332147,0,0.696710015581316,0.515469845288373,0.403367049246685,0.22237804384487,0,2.37264530772256,0,0.251335208800269,1.1937388322469,1.16978452271472,1.79763881730844,1.29682829924817,3.38540164532424,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0,0.316182685621286,0.295220295959204,0.941992367048249,0.493588655687202,0.592905254174298,0.333690211432188,0,0.674586337154561,0.405720242777006,3.37648023653384,7.63877555344259,10.64475708568,11.1873306474774,5.21666685057355,4.31304619582064,1.48856379067401,6.24075346229121,2.77836765741823,1.07638448113147,0.964887042726734,11.6394509804961,0.37898282354097,0,0.169745085775188,0.469380496577004,0.335012514883631,0.476087281772027,0,2.36452716159286,2.43611158613652,5.42146213435456,9.01248230936559,8.28887912956299,7.37710198765709,4.52373851817817,0.54390568381871,6.88469982226651,17.1080782708934,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16364 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=Q64287 | |||
|association_with_transcript=4bp_to_ENSMUST00000021784,ENSMUST00000110307_5end | |||
|cluster_id=chr13:30841099..30841116,+ | |||
|description=CAGE_peak_1_at_Irf4_5end | |||
|id=chr13:30841099..30841116,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.37e-07!12;CL:0000791!2.75e-07!9;CL:0000789!2.75e-07!9;CL:0002420!2.75e-07!9;CL:0002419!2.75e-07!9;CL:0000790!2.75e-07!9;CL:0000084!6.52e-07!11;CL:0000827!6.52e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.09e-08,9;CL:0000789,2.09e-08,9;CL:0002420,2.09e-08,9;CL:0002419,2.09e-08,9;CL:0000790,2.09e-08,9;CL:0000838,5.08e-08,12;CL:0000624,1.16e-07,8;CL:0002031,1.52e-07,25;CL:0000084,3.17e-07,11;CL:0000827,3.17e-07,11;CL:0000542,5.05e-07,13;CL:0000051,5.05e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.91e-12!48;UBERON:0002405!5.71e-11!70;UBERON:0002390!3.96e-10!45;UBERON:0003061!3.96e-10!45;UBERON:0004177!2.09e-09!29;UBERON:0005057!4.17e-08!51;UBERON:0003408!2.33e-07!24;UBERON:0006562!3.16e-07!24;UBERON:0001557!3.16e-07!24;UBERON:0001042!3.16e-07!24;UBERON:0008814!3.16e-07!24;UBERON:0009145!3.16e-07!24;UBERON:0002370!6.89e-07!23;UBERON:0000974!6.89e-07!23;UBERON:0004807!6.89e-07!23;UBERON:0005058!6.89e-07!23;UBERON:0003351!6.89e-07!23;UBERON:0009113!6.89e-07!23;UBERON:0003295!6.89e-07!23;UBERON:0009722!6.89e-07!23;UBERON:0005562!6.89e-07!23;UBERON:0007690!6.89e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.05e-13,48;UBERON:0002405,1.05e-13,48;UBERON:0004177,7.46e-12,29;UBERON:0005057,7.46e-12,29;UBERON:0002390,9.72e-12,45;UBERON:0003061,9.72e-12,45;UBERON:0000077,1.20e-10,35;UBERON:0003408,2.29e-09,24;UBERON:0006562,3.37e-09,24;UBERON:0001557,3.37e-09,24;UBERON:0001042,3.37e-09,24;UBERON:0008814,3.37e-09,24;UBERON:0009145,3.37e-09,24;UBERON:0002370,8.69e-09,23;UBERON:0000974,8.69e-09,23;UBERON:0004807,8.69e-09,23;UBERON:0005058,8.69e-09,23;UBERON:0003351,8.69e-09,23;UBERON:0009113,8.69e-09,23;UBERON:0003295,8.69e-09,23;UBERON:0009722,8.69e-09,23;UBERON:0005562,8.69e-09,23;UBERON:0007690,8.69e-09,23;UBERON:0000072,2.93e-07,27;UBERON:0001004,6.31e-07,42;UBERON:0001041,7.32e-07,80 | |||
|phase1_expression=0.320297694209588,0,1.36499771816861,0,0,0,0.467225281191051,79.6690905634526,3698.94209709074,3518.92608872485,1414.60285347912,1345.43723361534,20.8864890516071,17.3092396789615,38.9738421324325,38.4703008040669,6.99561878128147,164.513519234321,164.125977026069,116.28276459266,1.87095238332354,2.18440092641948,0.783599367416806,33.2784239410286,39.2289870624861,0,0,0,0.570070258369122,2.01624103807945,1.55211357458713,0,0,0,0,0,0.408338712524738,0,0.7813353445238,0.523523743973798,2.94115744015507,1.36609096991689,1.45653105909346,0,0.101376931219515,0,0,0,0.219686182734472,0.194429899074283,0,0,296.304082297962,48.5992635147601,42.011724892808,0,0.286533439938757,0,0,0.528990979272033,0,0,0,1.3498495759221,3.9554654502679,0,0,0.384218305321555,0.103689612308478,0.135005938331691,0,0,0.441737081903227,0,0,0,0,0,0.153606533256243,0.131886287730194,0,0,0.279182999001381,1.12552522006336,0.30559649555362,0,0.142371680799103,0,1.21161909333094,1.66257432234928,7.24661221754194,0,0.679971333707751,0,0,0,7.44355426698285,0,0,0,0,0,0,0,0,0,0,5.709193985953,150.960786166301,4.45326417194474,0.173485326766136,0.304465478312141,0.461230994512117,0,0.352766121407114,7.53999547978053,0,37.8850315130169,34.4998115260451,3.72063754879041,28.2677143629304,37.8202697445473,9.31958806090611,0.292780797011547,0,27.8448190177365,2.87556298814209,1.19980546198682,1.14363204365758,0.898743836428936,0,0.125654352112864,0,0,0.20778804455956,0,0.101839363850316,40.5566724188903,0,1.89397670297827,0,0,0.180062129805349,1.20563854268572,0.408218994907967,0.768682321709099,0.655912071918102,1.55222022443409,0,0,0.351902248327898,0.219195732427575,0,0.696504333044333,1.02891068203972,0.199034266818493,0,0.772043721344145,0.568326998791185,0,0,0,0,0,0.308534225774757,0,0.268273401399619,0.116765342367169,0.16455984991348,0.656669856316381,1.4592385718254,1.16959989940266,4.61055242111206,3.22095405024892,0.210289948564127,0,3.63460661282178,10.0491215332147,0,0.696710015581316,0.515469845288373,0.403367049246685,0.22237804384487,0,2.37264530772256,0,0.251335208800269,1.1937388322469,1.16978452271472,1.79763881730844,1.29682829924817,3.38540164532424,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0,0.316182685621286,0.295220295959204,0.941992367048249,0.493588655687202,0.592905254174298,0.333690211432188,0,0.674586337154561,0.405720242777006,3.37648023653384,7.63877555344259,10.64475708568,11.1873306474774,5.21666685057355,4.31304619582064,1.48856379067401,6.24075346229121,2.77836765741823,1.07638448113147,0.964887042726734,11.6394509804961,0.37898282354097,0,0.169745085775188,0.469380496577004,0.335012514883631,0.476087281772027,0,2.36452716159286,2.43611158613652,5.42146213435456,9.01248230936559,8.28887912956299,7.37710198765709,4.52373851817817,0.54390568381871,6.88469982226651,17.1080782708934,0.321101179975584,0.117211686592203,0,9.3414243065618,0.315508219416257,0,0.215423397732799,0.238968797952552,1.33679204449436,0.566153061577665,0,0,0,1.92792789853084,2.2710413633323,0.534196811001766,0.162886959353576,2.8044920905331,10.619611067197,0,0,0.188605079755898,0.590603785761546,0.307435147943927,0.516856586336442,0.727067458955011,1.42598951353889,1.58018378967908,3.16255825724996,4.12542172992747,0.340439605753788,0.18006109403131,0.258717367565509,0.643011105094777,0,0.178368817602071,0.164549020602121,0.304464949114599,0.23467170806371,0,0.661585194164886,19.6214641000361,48.1163991553799,4.70440814439616,4.17803204010978,3.28281799490123,2.62332752966866,0.370850604021019,49.5525554313773,1.857481811669,5.37064129372164,14.8811081033706,32.396531969883,36.1469513666306,15.6380155594347,12.7355821614529,19.0715963850105,0,0,0,0.108005340821801,0.418176592028937,0.436725127492355,0.134864346384821,1.48776220305605,2.35580347785627,3.11075935900303,16.1548221402601,0,0,0,0.194451188344048,0.258319646955462,0.168956125490778,0.234714477291508,0.39061315453185,0.209718688851422,0.241584120826006,3.45636007509439,15.4845449107807,1.21635129174099,2.97861775777999,4.28738715826724,4.65469408735452,5.56307793387542,10.4570041082373,8.12292399460175,7.47151729616292,5.48689007915999,8.16692099608408,10.3305353584138,7.88937101450702,9.23327527234395,6.12172035761071,0,0,0,4.25017106870819,2.62755465631655,3.6630324853453,1.92931541171159,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0.341467211508268,2.18796045361465,0.628839487883947,1.65459157605013,1.77797382241292,2.47242068686673,1.60459604795908,1.01078884705519,1.01391719956096,2.07488975524684,1.77918864192777,1.40855335290712,1.37845125493472,2.38146845641537,0.579421629724277,2.12200142510076,1.23625770240992,1.61918812147837,1.02860775715625,1.24233064311536,1.66905332963125,1.74415699958794,1.41164070622996,2.03075058940024,2.0122077016005,2.10455769150274,1.7654534799962,1.12228454331548,1.42362021749009,1.47756723563345,0.818462086339379,1.70430525304563,1.15743966588685,0.999242311751784,4.91256377735358,15.9004579995741,35.5796297648049,3.9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| |||
|short_description=p1@Irf4 | |||
}} |
Latest revision as of 12:06, 1 October 2015
Short description: | p1@Irf4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Irf4_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 4bp_to_ENSMUST00000021784, ENSMUST00000110307_5end |
EntrezGene: | Irf4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.09e-08 | 9 |
alpha-beta T cell | 2.09e-08 | 9 |
immature T cell | 2.09e-08 | 9 |
mature T cell | 2.09e-08 | 9 |
immature alpha-beta T cell | 2.09e-08 | 9 |
lymphoid lineage restricted progenitor cell | 5.08e-08 | 12 |
CD4-positive, alpha-beta T cell | 1.16e-07 | 8 |
hematopoietic lineage restricted progenitor cell | 1.52e-07 | 25 |
T cell | 3.17e-07 | 11 |
pro-T cell | 3.17e-07 | 11 |
lymphocyte | 5.05e-07 | 13 |
common lymphoid progenitor | 5.05e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.05e-13 | 48 |
immune system | 1.05e-13 | 48 |
hemopoietic organ | 7.46e-12 | 29 |
immune organ | 7.46e-12 | 29 |
hematopoietic system | 9.72e-12 | 45 |
blood island | 9.72e-12 | 45 |
mixed endoderm/mesoderm-derived structure | 1.20e-10 | 35 |
gland of gut | 2.29e-09 | 24 |
pharynx | 3.37e-09 | 24 |
upper respiratory tract | 3.37e-09 | 24 |
chordate pharynx | 3.37e-09 | 24 |
pharyngeal arch system | 3.37e-09 | 24 |
pharyngeal region of foregut | 3.37e-09 | 24 |
thymus | 8.69e-09 | 23 |
neck | 8.69e-09 | 23 |
respiratory system epithelium | 8.69e-09 | 23 |
hemolymphoid system gland | 8.69e-09 | 23 |
pharyngeal epithelium | 8.69e-09 | 23 |
thymic region | 8.69e-09 | 23 |
pharyngeal gland | 8.69e-09 | 23 |
entire pharyngeal arch endoderm | 8.69e-09 | 23 |
thymus primordium | 8.69e-09 | 23 |
early pharyngeal endoderm | 8.69e-09 | 23 |
segment of respiratory tract | 2.93e-07 | 27 |
respiratory system | 6.31e-07 | 42 |
foregut | 7.32e-07 | 80 |