FFCP PHASE1:Hg19::chr3:52029945..52029956,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6159 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10331 | |||
|TSSclassifier=strong | |||
|UniProt=P47914 | |||
|association_with_transcript=1bp_to_ENST00000294189,NM_000992,uc003dcs.2_5end | |||
|cluster_id=chr3:52029945..52029956,- | |||
|coexpression_cluster_id=C447 | |||
|description=CAGE_peak_3_at_RPL29_5end | |||
|id=chr3:52029945..52029956,- | |||
|ontology_enrichment_celltype=CL:0000548!1.78e-32!679;CL:0000004!1.78e-32!679;CL:0000255!1.78e-32!679;CL:0000012!4.16e-32!682;CL:0002321!1.13e-29!248;CL:0000220!3.71e-29!246;CL:0000066!7.24e-24!254;CL:0000144!8.03e-22!625;CL:0000003!6.88e-19!722;CL:0000222!8.68e-19!119;CL:0002371!2.79e-17!591;CL:0000055!2.90e-15!180;CL:0000183!5.10e-13!59;CL:0000680!5.28e-13!57;CL:0000056!5.28e-13!57;CL:0000355!5.28e-13!57;CL:0000187!2.75e-12!54;CL:0000393!6.26e-12!60;CL:0000211!6.26e-12!60;CL:0000063!2.05e-10!578;CL:0000192!5.95e-10!42;CL:0000514!5.95e-10!42;CL:0000076!1.02e-09!62;CL:0000359!7.27e-08!32 | |||
|ontology_enrichment_celltype_v019=CL:0000187;6.44e-08;55!CL:0000359;1.37e-07;32!CL:0000192;2.19e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.31e-30,250;CL:0000066,2.16e-24,253;CL:0000222,2.55e-19,121;CL:0000680,9.48e-13,58;CL:0000056,9.48e-13,58;CL:0000355,9.48e-13,58;CL:0000187,4.99e-12,55;CL:0000393,1.06e-11,61;CL:0000211,1.06e-11,61;CL:0000076,3.96e-10,63;CL:0000192,1.15e-09,43;CL:0000514,1.15e-09,43;CL:0000359,6.26e-08,32;CL:0000213,2.96e-07,58;CL:0000215,2.96e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000355;8.84e-08;58!CL:0000514;2.19e-07;43 | |||
|ontology_enrichment_disease=DOID:14566!2.83e-11!239;DOID:162!1.69e-10!235;DOID:2531!1.05e-07!51;DOID:0060083!1.05e-07!51;DOID:8692!3.38e-07!31;DOID:1240!3.88e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.00e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,3.07e-11,239;DOID:162,1.85e-10,235;DOID:2531,1.10e-07,51;DOID:0060083,1.10e-07,51;DOID:8692,2.95e-07,31;DOID:1240,3.39e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0000486!1.49e-14!82;UBERON:0004290!5.53e-14!70;UBERON:0000914!9.04e-14!83;UBERON:0002329!9.04e-14!83;UBERON:0003077!9.04e-14!83;UBERON:0003059!9.04e-14!83;UBERON:0007282!9.04e-14!83;UBERON:0009618!9.04e-14!83;UBERON:0007285!9.04e-14!83;UBERON:0000490!1.73e-13!138;UBERON:0003104!2.53e-13!238;UBERON:0009142!2.53e-13!238;UBERON:0005256!3.32e-13!143;UBERON:0002100!1.60e-12!216;UBERON:0002049!1.06e-11!79;UBERON:0007798!1.06e-11!79;UBERON:0003914!1.89e-11!118;UBERON:0001134!3.48e-11!61;UBERON:0002036!3.48e-11!61;UBERON:0003082!3.48e-11!61;UBERON:0000055!6.20e-11!69;UBERON:0001981!2.31e-10!60;UBERON:0007500!2.31e-10!60;UBERON:0004537!2.31e-10!60;UBERON:0006965!2.31e-10!60;UBERON:0001637!5.12e-10!42;UBERON:0003509!5.12e-10!42;UBERON:0004572!5.12e-10!42;UBERON:0002385!5.85e-10!63;UBERON:0001015!5.85e-10!63;UBERON:0000383!5.85e-10!63;UBERON:0000119!3.19e-09!312;UBERON:0000483!1.05e-08!309;UBERON:0004872!1.57e-08!84;UBERON:0004535!1.90e-07!110;UBERON:0004573!2.35e-07!33;UBERON:0004571!2.35e-07!33;UBERON:0001009!9.87e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;1.43e-07;74!UBERON:0001637;1.50e-07;42!UBERON:0003509;1.50e-07;42!UBERON:0004572;1.50e-07;42!UBERON:0007500;2.78e-07;56!UBERON:0001981;2.78e-07;56!UBERON:0004537;2.78e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,5.23e-16,148;UBERON:0007503,6.10e-16,78;UBERON:0000486,2.24e-14,83;UBERON:0002329,8.99e-14,71;UBERON:0003059,8.99e-14,71;UBERON:0007282,8.99e-14,71;UBERON:0004290,8.99e-14,71;UBERON:0009618,8.99e-14,71;UBERON:0003077,2.53e-13,72;UBERON:0007285,2.53e-13,72;UBERON:0007524,4.74e-13,73;UBERON:0002100,6.65e-13,199;UBERON:0002049,4.77e-12,78;UBERON:0007798,4.77e-12,78;UBERON:0003914,1.04e-11,117;UBERON:0003104,1.38e-11,160;UBERON:0009142,1.38e-11,160;UBERON:0005256,2.58e-11,122;UBERON:0000055,2.77e-11,68;UBERON:0001134,5.69e-11,62;UBERON:0002036,5.69e-11,62;UBERON:0003082,5.69e-11,62;UBERON:0007500,1.01e-10,59;UBERON:0001981,1.01e-10,59;UBERON:0004537,1.01e-10,59;UBERON:0006965,1.01e-10,59;UBERON:0001637,4.73e-10,42;UBERON:0003509,4.73e-10,42;UBERON:0004572,4.73e-10,42;UBERON:0002385,9.80e-10,64;UBERON:0001015,9.80e-10,64;UBERON:0000383,9.80e-10,64;UBERON:0000119,6.57e-09,309;UBERON:0004872,1.40e-08,83;UBERON:0000483,2.14e-08,306;UBERON:0004535,1.96e-07,109;UBERON:0004573,2.29e-07,33;UBERON:0004571,2.29e-07,33;UBERON:0001009,8.97e-07,112 | |||
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| |||
|short_description=p3@RPL29 | |||
}} |
Latest revision as of 22:26, 18 September 2015
Short description: | p3@RPL29 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RPL29_5end |
Coexpression cluster: | C447_Alveolar_Bronchial_Smooth_Renal_Tracheal_Keratocytes_Hepatic |
Association with transcript: | 1bp_to_ENST00000294189, NM_000992, uc003dcs.2_5end |
EntrezGene: | RPL29 |
HGNC: | 10331 |
UniProt: | P47914 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.31e-30 | 250 |
epithelial cell | 2.16e-24 | 253 |
mesodermal cell | 2.55e-19 | 121 |
muscle precursor cell | 9.48e-13 | 58 |
myoblast | 9.48e-13 | 58 |
multi-potent skeletal muscle stem cell | 9.48e-13 | 58 |
muscle cell | 4.99e-12 | 55 |
electrically responsive cell | 1.06e-11 | 61 |
electrically active cell | 1.06e-11 | 61 |
squamous epithelial cell | 3.96e-10 | 63 |
smooth muscle cell | 1.15e-09 | 43 |
smooth muscle myoblast | 1.15e-09 | 43 |
vascular associated smooth muscle cell | 6.26e-08 | 32 |
lining cell | 2.96e-07 | 58 |
barrier cell | 2.96e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 3.07e-11 | 239 |
cancer | 1.85e-10 | 235 |
hematologic cancer | 1.10e-07 | 51 |
immune system cancer | 1.10e-07 | 51 |
myeloid leukemia | 2.95e-07 | 31 |
leukemia | 3.39e-07 | 39 |