FFCP PHASE1:Hg19::chr4:5798958..5798961,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:5798958..5798961,+ | |||
|coexpression_cluster_id=C193 | |||
|description=CAGE_peak_at_chr4:5798958..5798961,+ | |||
|id=chr4:5798958..5798961,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.69e-30!180;CL:0000220!3.94e-19!246;CL:0002321!5.11e-19!248;CL:0000183!1.21e-16!59;CL:0002371!1.24e-16!591;CL:0000548!4.68e-16!679;CL:0000004!4.68e-16!679;CL:0000255!4.68e-16!679;CL:0000680!1.31e-15!57;CL:0000056!1.31e-15!57;CL:0000355!1.31e-15!57;CL:0000012!1.39e-15!682;CL:0000144!1.48e-15!625;CL:0000222!2.28e-14!119;CL:0000187!2.94e-14!54;CL:0000393!9.16e-13!60;CL:0000211!9.16e-13!60;CL:0000057!2.55e-12!75;CL:0000003!5.02e-11!722;CL:0000192!1.20e-10!42;CL:0000514!1.20e-10!42;CL:0000221!3.17e-08!71 | |||
|ontology_enrichment_celltype_v019=CL:0000192;5.47e-12;43!CL:0000187;9.65e-12;55!CL:0000359;8.62e-11;32!CL:0000393;1.59e-09;61!CL:0000211;1.59e-09;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,8.50e-21,55;CL:0000680,2.63e-19,58;CL:0000056,2.63e-19,58;CL:0000355,2.63e-19,58;CL:0000393,5.76e-18,61;CL:0000211,5.76e-18,61;CL:0000192,1.78e-16,43;CL:0000514,1.78e-16,43;CL:0000222,1.52e-11,121;CL:0000359,3.05e-11,32;CL:0002321,1.41e-10,250 | |||
|ontology_enrichment_development_v019=CL:0000514;5.47e-12;43!CL:0000355;1.49e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.87e-19!83;UBERON:0002329!2.87e-19!83;UBERON:0003077!2.87e-19!83;UBERON:0003059!2.87e-19!83;UBERON:0007282!2.87e-19!83;UBERON:0009618!2.87e-19!83;UBERON:0007285!2.87e-19!83;UBERON:0005256!3.61e-18!143;UBERON:0004290!2.78e-15!70;UBERON:0000486!2.98e-15!82;UBERON:0000490!4.13e-15!138;UBERON:0002100!8.77e-14!216;UBERON:0000119!1.25e-13!312;UBERON:0001134!1.76e-13!61;UBERON:0002036!1.76e-13!61;UBERON:0003082!1.76e-13!61;UBERON:0000481!3.07e-13!347;UBERON:0000483!3.95e-13!309;UBERON:0000475!5.69e-13!365;UBERON:0003104!1.39e-12!238;UBERON:0009142!1.39e-12!238;UBERON:0002385!1.54e-12!63;UBERON:0001015!1.54e-12!63;UBERON:0000383!1.54e-12!63;UBERON:0002049!5.31e-11!79;UBERON:0007798!5.31e-11!79;UBERON:0004535!3.63e-10!110;UBERON:0001009!2.20e-09!113;UBERON:0003914!4.79e-09!118;UBERON:0004872!1.60e-08!84;UBERON:0001444!1.16e-07!48;UBERON:0001637!1.34e-07!42;UBERON:0003509!1.34e-07!42;UBERON:0004572!1.34e-07!42;UBERON:0000055!1.78e-07!69;UBERON:0001981!7.81e-07!60;UBERON:0007500!7.81e-07!60;UBERON:0004537!7.81e-07!60;UBERON:0006965!7.81e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0001456;3.19e-11;21!UBERON:0000019;1.21e-10;19!UBERON:0000047;1.21e-10;19!UBERON:0004088;1.21e-10;19!UBERON:0010230;1.21e-10;19!UBERON:0001801;2.47e-10;14!UBERON:0000970;5.51e-10;20!UBERON:0002104;2.16e-09;21!UBERON:0001637;2.46e-09;42!UBERON:0003509;2.46e-09;42!UBERON:0004572;2.46e-09;42!UBERON:0000020;2.32e-08;23!UBERON:0003891;2.41e-08;4!UBERON:0007500;4.98e-08;56!UBERON:0001981;4.98e-08;56!UBERON:0004537;4.98e-08;56!UBERON:0001032;6.51e-08;24!UBERON:0004456;6.51e-08;24!UBERON:0010371;1.14e-07;31!UBERON:0004573;2.39e-07;33!UBERON:0004571;2.39e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.18e-20,73;UBERON:0007503,4.45e-20,78;UBERON:0002329,6.02e-20,71;UBERON:0003059,6.02e-20,71;UBERON:0007282,6.02e-20,71;UBERON:0004290,6.02e-20,71;UBERON:0009618,6.02e-20,71;UBERON:0003077,1.52e-19,72;UBERON:0007285,1.52e-19,72;UBERON:0000486,3.29e-18,83;UBERON:0001134,1.51e-17,62;UBERON:0002036,1.51e-17,62;UBERON:0003082,1.51e-17,62;UBERON:0000490,7.82e-17,148;UBERON:0002385,9.35e-17,64;UBERON:0001015,9.35e-17,64;UBERON:0000383,9.35e-17,64;UBERON:0000119,8.00e-14,309;UBERON:0000483,1.91e-13,306;UBERON:0002049,3.65e-13,78;UBERON:0007798,3.65e-13,78;UBERON:0005256,4.02e-13,122;UBERON:0001637,6.21e-13,42;UBERON:0003509,6.21e-13,42;UBERON:0004572,6.21e-13,42;UBERON:0003104,1.39e-11,160;UBERON:0009142,1.39e-11,160;UBERON:0004872,1.36e-10,83;UBERON:0001456,1.49e-10,22;UBERON:0004535,1.52e-10,109;UBERON:0001009,4.81e-10,112;UBERON:0001801,4.94e-10,14;UBERON:0000019,6.66e-10,20;UBERON:0000047,6.66e-10,20;UBERON:0010312,6.66e-10,20;UBERON:0004088,6.66e-10,20;UBERON:0010230,6.66e-10,20;UBERON:0003072,6.66e-10,20;UBERON:0004128,6.66e-10,20;UBERON:0003071,6.66e-10,20;UBERON:0007500,8.04e-10,59;UBERON:0001981,8.04e-10,59;UBERON:0004537,8.04e-10,59;UBERON:0006965,8.04e-10,59;UBERON:0002100,1.44e-09,199;UBERON:0005085,1.79e-09,31;UBERON:0000970,2.59e-09,21;UBERON:0002104,2.59e-09,21;UBERON:0000055,6.85e-09,68;UBERON:0003891,4.44e-08,4;UBERON:0004573,4.87e-08,33;UBERON:0004571,4.87e-08,33;UBERON:0000020,7.57e-08,24;UBERON:0001032,7.57e-08,24;UBERON:0004456,7.57e-08,24;UBERON:0000033,6.22e-07,56;UBERON:0003914,6.88e-07,117 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.737201809504527,0.697801167972428,0.655324116390517,0,2.22779435328084,0,0,0,0,0,1.72369481307503,0.204000691244253,0.313454721478088,1.71741592278634,0.410623275218653,0.251085279189606,0.152826811495903,0.246301768349837,0.236132343941038,0,0,0.154816123316076,2.75826367343678,0.30120591877825,1.10926203050036,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445641827540694,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91793842765295,0.361439152384566,0.50133791063589,0,1.5905718941022,0.486634870302636,1.03988298880475,0.886917589850256,0.351339142772504,0.196468613246569,1.09288586487763,0,0,0,0,0,0,0,2.18638648103376,0.860234595106124,0.347140501607594,1.69592382577203,0.838998872419812,0.275118041940067,1.04497483268405,0.258416759169329,0,0.33472061276467,1.20848795132744,0,0,1.10298924103761,0,0.803697554556718,0.22452937262617,0,0,0.949265659568129,0.183201743930407,0,0,2.18047026071267,0,1.39293562831038,0,0,0.709336764396714,0.560677600142307,1.06748995729705,0.24666754841716,1.24484414159907,0.269421344139376,0.490385709340376,1.66493170409425,0,1.40592859100278,0,3.4228309292667,0.149448680551801,0.352303495931295,1.13311061057692,0.140450806702248,0.816616685019573,0.122834317311768,0.309977343527296,2.37600571456411,0.247266929278557,4.55080680969013,0.718618141816238,1.34668891163253,0.375355559615893,0.831192346452549,0.438977620880838,0.30648779579902,0.751190294532984,1.36118619792025,0,2.13557388818567,0.635795703478686,0,1.8549455262919,0,0.930584281657949,0,0.974370051611986,0,1.01254888506529,1.2931684545505,0,0.503760491138201,0.67824236924195,1.15956511897978,1.09098448236334,0,0,0.132529768321485,0,0.10366105501537,0,0.36497735907583,0,1.28648187638577,1.38134921352481,0,0,0,0.337169380156203,0,0,0,0.237270619111097,0.269662616320329,0.196221465125346,0,0.738155454624648,0,2.057870056657,1.47008711385542,0,0,0,0,0,2.40194934417936,0.878002283269004,4.49607013030478,0.201057944823262,0.740707561268237,2.28065813717227,1.03993478527958,1.44331342025273,1.04337364477569,0.234817388471643,0.288732895522148,0,0,0,0,0,0,0,0.93733833986777,0.839910640994298,0.708875486211932,0.626909658919938,0,2.68367875415648,0,0,0,0,0,0.190493682876507,0.381988425558278,1.17217447210047,0,0,0,0,1.23344192779897,0,0.8800594298514,0.258543431515556,35.7656445851882,0,1.06375246633948,0,0.771622122786426,0,0.266422179016099,0.857867961948885,6.51145926469732,0.823240336780769,1.62868092146868,0.355391948742546,0,0,0,0,0,0,0,0.479249710983165,0,2.85273810081437,0.723906533337896,0.61642896765115,0.895304816199478,0,0,0,0,0.508189248444927,1.30139853857622,0,0.335032530668698,0,0,0,0,2.08575535922538,0,0,0.415941723061614,0.535286966391485,0.946214490203608,0.35142424497814,0.300946099727719,0,0,0,0.368738337083406,1.56390506042549,2.74121620447837,0.343143423810856,0,0,0,0,4.99306318531491,0,0,0,0.280660094433074,0.256278298511402,0,0,0,0.616838775210622,0.355123450626254,2.13530605635904,0,0.348631135379878,0,0,0.0920809889358963,1.26295892981067,0.546273504020151,0.131124414959424,0,0.616122696835318,2.35304930753057,0,0.844413031143006,0,0.340187410553031,0.215915916102139,0,1.89662506280697,1.00337954770971,0,0,0.447749509444357,0,0,1.53870075069834,1.64007322849853,0,0,0.0915694648183434,0.082509499920588,0.574265537996172,0,1.6068392984416,1.35339005608971,0.308097234229289,0.460511024178389,0.275673144969061,2.14840489736547,1.16013355131383,0.426133137080504,1.15741646340759,0,0,0.127612712494584,0,0,0,3.485186350803,2.15623506123262,1.06461206063404,5.21959795245044,1.29726953372744,0.143124886741991,0.372158369359667,1.58189712359363,0.38126038784765,2.55897791311334,0,12.0917234211856,0,1.97859703341646,0.274537029736055,0.589062011728432,2.42618977887979,0,0.421258456238981,3.90106991271672,0,2.11300293513511,0.682499557039929,0,1.13008116620243,2.75682671773062,0,0,2.31510213706675,1.31178950409327,2.63783490051515,0.6196469961995,1.40847801266121,1.29070216983646,0.785992328104969,1.07001315444375,3.19284957663538,0.211107635297664,0,5.31262443272001,1.74967360122491,1.05844323998063,0.670302275535787,2.17781969722645,0,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36408156524854,0.334330152832435,0,0,0,0.307160702099232,0,0,1.55832187032068,0,0.211125408127993,0,0,0,1.32949287252801,0.123084805461069,0,0.539210106883961,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0.455768223388005,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0.167821586975843,0,0,0,0.326465616318295,0,0,0,0,0,0.296521128680622,1.60633120630454,0.522109747527277,0,0,0,0,0,0,0,0,0.30607276163049,0,0.300646838828985,0.311064574191741,0,0,0.313932918407225,0,0,0.693373365065693,0,0.0979923974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| |||
|short_description=p@chr4:5798958..5798961,+ | |||
}} |
Latest revision as of 05:54, 30 July 2015
Short description: | p@chr4:5798958..5798961, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:5798958..5798961, + |
Coexpression cluster: | C193_Mesenchymal_Adipocyte_mature_Cardiac_heart_CD14CD16_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 8.50e-21 | 55 |
muscle precursor cell | 2.63e-19 | 58 |
myoblast | 2.63e-19 | 58 |
multi-potent skeletal muscle stem cell | 2.63e-19 | 58 |
electrically responsive cell | 5.76e-18 | 61 |
electrically active cell | 5.76e-18 | 61 |
smooth muscle cell | 1.78e-16 | 43 |
smooth muscle myoblast | 1.78e-16 | 43 |
mesodermal cell | 1.52e-11 | 121 |
vascular associated smooth muscle cell | 3.05e-11 | 32 |
embryonic cell | 1.41e-10 | 250 |