FFCP PHASE1:Hg19::chr5:178977328..178977343,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80230 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19760 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-215bp_to_ENST00000319449_5end | |||
|cluster_id=chr5:178977328..178977343,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_6_at_RUFY1_5end | |||
|id=chr5:178977328..178977343,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.20e-67!42;CL:0000738!6.49e-65!140;CL:0000766!2.57e-63!76;CL:0000860!3.30e-62!45;CL:0000037!4.85e-62!172;CL:0000566!4.85e-62!172;CL:0000557!2.77e-58!71;CL:0002032!2.98e-58!165;CL:0000837!2.98e-58!165;CL:0000988!2.52e-57!182;CL:0000763!1.23e-55!112;CL:0000049!1.23e-55!112;CL:0002009!2.38e-54!65;CL:0002031!7.32e-53!124;CL:0000839!2.13e-51!70;CL:0002194!3.56e-51!63;CL:0000576!3.56e-51!63;CL:0000040!3.56e-51!63;CL:0000559!3.56e-51!63;CL:0002087!4.92e-50!119;CL:0000134!5.63e-24!358;CL:0002320!4.82e-23!365;CL:0000219!1.54e-20!390;CL:0000034!1.19e-16!444;CL:0000048!1.59e-16!430;CL:0000723!5.82e-16!436;CL:0002393!7.80e-12!9;CL:0002397!7.80e-12!9;CL:0000094!4.94e-11!8;CL:0000081!1.14e-07!11;CL:0000063!3.89e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.31e-94;33!CL:0002057;1.31e-94;33!CL:0000473;1.50e-62;39!CL:0000234;1.50e-62;39!CL:0000576;3.94e-49;48!CL:0000766;9.60e-31;69!CL:0000763;6.12e-14;100!CL:0000738;3.32e-12;136!CL:0002087;4.55e-12;104!CL:0000771;1.35e-11;2!CL:0000784;1.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.57e-85,42;CL:0002057,2.57e-85,42;CL:0000473,6.26e-74,48;CL:0000234,6.26e-74,48;CL:0002009,7.03e-65,61;CL:0000557,4.12e-63,67;CL:0000766,1.16e-62,72;CL:0002194,1.86e-62,59;CL:0000576,1.86e-62,59;CL:0000040,1.86e-62,59;CL:0000559,1.86e-62,59;CL:0000839,2.62e-55,66;CL:0000763,7.36e-46,108;CL:0000049,7.36e-46,108;CL:0000738,6.78e-40,136;CL:0000037,2.24e-35,168;CL:0002031,4.65e-35,120;CL:0002087,3.11e-34,115;CL:0000988,3.06e-33,177;CL:0002032,7.89e-33,161;CL:0000837,7.89e-33,161;CL:0000134,3.64e-13,354;CL:0002320,9.00e-13,361;CL:0000771,1.09e-11,2;CL:0000219,2.19e-11,386;CL:0000034,5.41e-10,441;CL:0000048,1.09e-09,427;CL:0000723,1.88e-09,433;CL:0000784,2.18e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.25e-61;42!CL:0000049;3.39e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.61e-52!80;UBERON:0002390!7.51e-50!102;UBERON:0003061!7.51e-50!102;UBERON:0001474!1.55e-47!86;UBERON:0002193!8.34e-44!112;UBERON:0004765!1.01e-39!101;UBERON:0001434!1.01e-39!101;UBERON:0002405!1.39e-38!115;UBERON:0002384!8.98e-22!375;UBERON:0002204!8.49e-18!167;UBERON:0003081!5.36e-16!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.08e-59,76;UBERON:0001474,3.66e-54,82;UBERON:0004765,7.64e-49,90;UBERON:0002390,1.58e-47,98;UBERON:0003061,1.58e-47,98;UBERON:0002405,4.41e-47,93;UBERON:0001434,2.23e-43,100;UBERON:0002193,1.42e-42,108;UBERON:0002204,1.62e-23,167;UBERON:0003081,1.07e-19,203;UBERON:0002384,3.10e-12,371;UBERON:0000926,2.30e-10,315;UBERON:0004120,2.30e-10,315;UBERON:0006603,2.30e-10,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.157421562627358,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0,0.0774672005803016,0,1.17440175733939,0,0.802177789880567,1.30206522429511,0,0.32389366601898,0,1.30858414901608,0.755751887377619,1.4555043671269,3.48643555358527,6.57868620834921,7.43295290148249,2.3015391385772,4.09857130446561,3.78371567821736,5.5159308917859,6.45484683583826,5.41705946377367,2.82363509313907,3.547779950752,2.47195832889593,1.83650335422542,2.88836124368484,5.11469700639233,0.989553900560148,1.99463657621632,1.27867425159808,0.580418477257168,2.8369261234557,1.86846674698672,2.51248665256743,5.73631210262222,4.99534342821768,0,2.57794345191295,1.58231193720442,0.211255286311942,0.850417199860174,0.628975936525128,0.898629049171961,0.600707571366025,0.32145117339416,0.570025487482497,0.19891667719909,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,2.27685187643779,0.587237189370939,0.382273228125229,1.32171328579026,0,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.579297615531196,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,1.19245312152671,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.414656231081544,0,0.6312121671319,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07813787429759,0.513372145118994,0,0,0,0,0,0.749007023947182,0,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52927441428475,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0.324621940274555,0,0,0.156679895773023,0,0,0,0,0.425846237690326,0,0.307240764308458,0.223676107892416,0.166849141711909,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83239764200917,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0.160753148465019,0,0,0.449947783103001,2.32140586367385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.243585196761792,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0,0,0.363697318405119,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@RUFY1 | |||
}} |
Latest revision as of 08:22, 17 September 2015
Short description: | p6@RUFY1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RUFY1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -215bp_to_ENST00000319449_5end |
EntrezGene: | RUFY1 |
HGNC: | 19760 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.57e-85 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.57e-85 | 42 |
defensive cell | 6.26e-74 | 48 |
phagocyte | 6.26e-74 | 48 |
macrophage dendritic cell progenitor | 7.03e-65 | 61 |
granulocyte monocyte progenitor cell | 4.12e-63 | 67 |
myeloid leukocyte | 1.16e-62 | 72 |
monopoietic cell | 1.86e-62 | 59 |
monocyte | 1.86e-62 | 59 |
monoblast | 1.86e-62 | 59 |
promonocyte | 1.86e-62 | 59 |
myeloid lineage restricted progenitor cell | 2.62e-55 | 66 |
myeloid cell | 7.36e-46 | 108 |
common myeloid progenitor | 7.36e-46 | 108 |
leukocyte | 6.78e-40 | 136 |
hematopoietic stem cell | 2.24e-35 | 168 |
hematopoietic lineage restricted progenitor cell | 4.65e-35 | 120 |
nongranular leukocyte | 3.11e-34 | 115 |
hematopoietic cell | 3.06e-33 | 177 |
hematopoietic oligopotent progenitor cell | 7.89e-33 | 161 |
hematopoietic multipotent progenitor cell | 7.89e-33 | 161 |
mesenchymal cell | 3.64e-13 | 354 |
connective tissue cell | 9.00e-13 | 361 |
eosinophil | 1.09e-11 | 2 |
motile cell | 2.19e-11 | 386 |
stem cell | 5.41e-10 | 441 |
multi fate stem cell | 1.09e-09 | 427 |
somatic stem cell | 1.88e-09 | 433 |
plasmacytoid dendritic cell | 2.18e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.08e-59 | 76 |
bone element | 3.66e-54 | 82 |
skeletal element | 7.64e-49 | 90 |
hematopoietic system | 1.58e-47 | 98 |
blood island | 1.58e-47 | 98 |
immune system | 4.41e-47 | 93 |
skeletal system | 2.23e-43 | 100 |
hemolymphoid system | 1.42e-42 | 108 |
musculoskeletal system | 1.62e-23 | 167 |
lateral plate mesoderm | 1.07e-19 | 203 |
connective tissue | 3.10e-12 | 371 |
mesoderm | 2.30e-10 | 315 |
mesoderm-derived structure | 2.30e-10 | 315 |
presumptive mesoderm | 2.30e-10 | 315 |