FFCP PHASE1:Hg19::chr6:68595369..68595417,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:68595369..68595417,- | |||
|coexpression_cluster_id=C93 | |||
|description=CAGE_peak_at_chr6:68595369..68595417,- | |||
|id=chr6:68595369..68595417,- | |||
|ontology_enrichment_celltype=CL:0000763!1.68e-18!112;CL:0000049!1.68e-18!112;CL:0002032!2.96e-12!165;CL:0000837!2.96e-12!165;CL:0000037!1.48e-11!172;CL:0000566!1.48e-11!172;CL:0000988!1.19e-10!182;CL:0000214!8.28e-08!3;CL:0000134!2.78e-07!358;CL:0002320!5.04e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000763;5.68e-14;100!CL:0000988;1.04e-07;177!CL:0000054;5.44e-07;2!CL:0000137;5.44e-07;2!CL:0000092;5.44e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,4.54e-29,108;CL:0000049,4.54e-29,108;CL:0002032,6.10e-19,161;CL:0000837,6.10e-19,161;CL:0000037,4.47e-18,168;CL:0000988,4.61e-17,177;CL:0000134,1.68e-07,354;CL:0002320,2.59e-07,361;CL:0000054,5.60e-07,2;CL:0000137,5.60e-07,2;CL:0000092,5.60e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000049;2.45e-10;108 | |||
|ontology_enrichment_disease=DOID:8692!1.96e-66!31;DOID:1240!3.79e-57!39;DOID:2531!5.78e-47!51;DOID:0060083!5.78e-47!51;DOID:1036!8.34e-34!8;DOID:0050686!2.17e-17!137;DOID:162!6.84e-10!235;DOID:14566!1.43e-09!239 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.34e-91;31!DOID:1036;8.63e-72;8!DOID:1240;1.99e-63;39!DOID:2531;4.08e-41;51!DOID:0060083;4.08e-41;51!DOID:0060085;1.03e-12;1!DOID:3165;1.03e-12;1!DOID:0060121;1.03e-12;1!DOID:2438;1.03e-12;1!DOID:4418;1.03e-12;1!DOID:0050686;6.03e-08;137!DOID:200;5.44e-07;2!DOID:4305;5.44e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.22e-94,31;DOID:1240,1.06e-74,39;DOID:1036,8.19e-72,8;DOID:2531,4.16e-64,51;DOID:0060083,4.16e-64,51;DOID:0050686,1.44e-22,137;DOID:0060085,1.09e-12,1;DOID:3165,1.09e-12,1;DOID:0060121,1.09e-12,1;DOID:2438,1.09e-12,1;DOID:4418,1.09e-12,1;DOID:162,2.26e-12,235;DOID:14566,4.50e-12,239;DOID:200,5.60e-07,2;DOID:4305,5.60e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0006915!8.28e-08!3;UBERON:0002018!8.28e-08!3;UBERON:0002217!8.28e-08!3;UBERON:0007616!8.28e-08!3;UBERON:0002384!2.09e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.69e-07,371 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,3.79200805722352,0,0,10.0632801485112,0.842391534340376,0.912938716132769,0.156679895773023,0,0,2.40882112655549,0,0,0,5.22309299324379,2.68411329470899,3.67068111766199,7.62013572067957,1.39203086947621,0,0.270455678475983,0,4.22961015263549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,5.18034846103582,0,12.6333569945621,12.1558771276999,15.4395860017775,10.8159627652785,4.4502242114506,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19228767021794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.77625595446959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.803892390468535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:68595369..68595417,- | |||
}} |
Latest revision as of 02:47, 31 July 2015
Short description: | p@chr6:68595369..68595417, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:68595369..68595417, - |
Coexpression cluster: | C93_chronic_acute_leukemia_acantholytic_medulloblastoma_testis_papillotubular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 4.54e-29 | 108 |
common myeloid progenitor | 4.54e-29 | 108 |
hematopoietic oligopotent progenitor cell | 6.10e-19 | 161 |
hematopoietic multipotent progenitor cell | 6.10e-19 | 161 |
hematopoietic stem cell | 4.47e-18 | 168 |
hematopoietic cell | 4.61e-17 | 177 |
mesenchymal cell | 1.68e-07 | 354 |
connective tissue cell | 2.59e-07 | 361 |
bone matrix secreting cell | 5.60e-07 | 2 |
osteocyte | 5.60e-07 | 2 |
osteoclast | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.69e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.22e-94 | 31 |
leukemia | 1.06e-74 | 39 |
chronic leukemia | 8.19e-72 | 8 |
hematologic cancer | 4.16e-64 | 51 |
immune system cancer | 4.16e-64 | 51 |
organ system cancer | 1.44e-22 | 137 |
organ system benign neoplasm | 1.09e-12 | 1 |
skin benign neoplasm | 1.09e-12 | 1 |
integumentary system benign neoplasm | 1.09e-12 | 1 |
dermis tumor | 1.09e-12 | 1 |
cutaneous fibrous histiocytoma | 1.09e-12 | 1 |
cancer | 2.26e-12 | 235 |
disease of cellular proliferation | 4.50e-12 | 239 |
giant cell tumor | 5.60e-07 | 2 |
bone giant cell tumor | 5.60e-07 | 2 |