FFCP PHASE1:Mm9::chr2:121097091..121097133,-: Difference between revisions
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{{FFCP|EntrezGene=27223|HGNC=|MCL_coexpression_id=321|UniProt=E9QL34,A2AU91,P70399,Q3V1P7,Q8BZ87,A2AU89|association_with_transcript=0bp_to_ENSMUST00000110645,ENSMUST00000124060,ENSMUST00000136617,ENSMUST00000140285,NM_013735,uc008lye.2,uc008lyg.2,uc008lyh.2,uc012cco.1_5end|description=CAGE_peak_1_at_Trp53bp1_5end|id=chr2:121097091..121097133,-|ontology_enrichment_celltype=CL:0000540!5.02e-12!33;CL:0000047!5.02e-12!33;CL:0000031!5.02e-12!33;CL:0000404!5.02e-12!33;CL:0000117!1.56e-11!23;CL:0000337!1.56e-11!23;CL:0000393!3.04e-08!39;CL:0000211!3.04e-08!39|ontology_enrichment_celltype_v019_2=CL:0000540,5.02e-12,33;CL:0000047,5.02e-12,33;CL:0000031,5.02e-12,33;CL:0000404,5.02e-12,33;CL:0000117,1.56e-11,23;CL:0000337,1.56e-11,23;CL:0000393,3.04e-08,39;CL:0000211,3.04e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.38e-18!71;UBERON:0003075!2.38e-18!71;UBERON:0007284!2.38e-18!71;UBERON:0000033!2.73e-18!63;UBERON:0000153!2.15e-17!94;UBERON:0003056!2.43e-17!49;UBERON:0001017!5.32e-16!73;UBERON:0005743!5.32e-16!73;UBERON:0004121!2.44e-15!102;UBERON:0000924!2.44e-15!102;UBERON:0006601!2.44e-15!102;UBERON:0007811!3.08e-15!86;UBERON:0001049!7.82e-15!52;UBERON:0005068!7.82e-15!52;UBERON:0006241!7.82e-15!52;UBERON:0007135!7.82e-15!52;UBERON:0000073!1.41e-14!75;UBERON:0001016!1.41e-14!75;UBERON:0000955!1.99e-14!50;UBERON:0006238!1.99e-14!50;UBERON:0003080!5.75e-14!40;UBERON:0002616!7.36e-14!49;UBERON:0002780!2.31e-13!39;UBERON:0001890!2.31e-13!39;UBERON:0006240!2.31e-13!39;UBERON:0002020!2.32e-10!34;UBERON:0002791!6.41e-09!29;UBERON:0003528!6.41e-09!29;UBERON:0001893!6.41e-09!29|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.41e-18,64;UBERON:0003075,1.41e-18,64;UBERON:0007284,1.41e-18,64;UBERON:0003056,2.43e-17,49;UBERON:0010314,4.34e-16,92;UBERON:0010371,4.49e-16,73;UBERON:0001017,5.32e-16,73;UBERON:0000073,1.93e-15,54;UBERON:0004121,4.42e-15,95;UBERON:0000924,4.42e-15,95;UBERON:0006601,4.42e-15,95;UBERON:0001049,7.82e-15,52;UBERON:0005068,7.82e-15,52;UBERON:0006241,7.82e-15,52;UBERON:0007135,7.82e-15,52;UBERON:0001016,1.41e-14,75;UBERON:0003080,5.75e-14,40;UBERON:0000955,2.23e-13,47;UBERON:0006238,2.23e-13,47;UBERON:0002780,2.31e-13,39;UBERON:0001890,2.31e-13,39;UBERON:0006240,2.31e-13,39;UBERON:0002616,8.09e-13,46;UBERON:0002020,2.32e-10,34;UBERON:0003528,6.41e-09,29;UBERON:0002791,6.41e-09,29;UBERON:0001893,6.41e-09,29|phase1_expression=26.1042620780814,3.48975407639361,5.0049916332849,3.32710632437513,3.50627010962443,11.5836697619204,8.64366770203445,16.2695387536386,19.7104211012333,28.0877431586392,12.4989116804619,16.2735204350486,12.1552518251156,15.4734112281625,5.3297561890506,4.45445588257617,0,11.6721001182548,10.1464680868247,12.3072999021429,16.8385714499118,11.3191684369009,10.1867917764185,4.7997726838022,3.67054849707472,2.8711598205751,1.7230479846363,5.17130958446134,3.6104449696711,4.03248207615889,5.98672378769323,4.44521471421742,2.46025915033828,0,8.66554859253824,9.47537478543406,11.0251452381679,5.02237956884289,3.1253413780952,6.28228492768558,8.2352408324342,4.09827290975067,6.79714494243615,11.2048167998264,11.2528393653661,12.664725899156,1.56478268869608,3.70642765846759,2.19686182734472,3.69416808241138,4.05960622713551,4.31257693094915,13.5903910906766,7.97898356212479,11.0910953717013,5.14518872071894,4.58453503902011,3.09403255366465,54.4231279712318,35.9713865904982,43.7343668419264,2.37191172448392,4.4464739805557,1.3498495759221,1.97773272513395,1.4209602298922,1.49800055259202,1.53687322128622,36.7061227572011,33.616478644591,40.8030425021681,16.5677570954206,15.4607978666129,39.1970557487853,41.1177070668234,25.7381260250806,20.9220173898839,22.7283461791634,28.5708151856613,54.2052642571097,48.5799387528795,58.8632108729139,16.7509799400829,24.7615548413939,32.0876320331301,32.9984015730508,41.2877874317399,57.9702276516685,3.7863096666592,5.97015324843606,15.3628179011889,3.44169550792555,0,3.2382191498269,4.54843492213368,3.13618820968135,5.47733238513832,8.69194645148094,8.83272415649754,6.00677276667578,21.8307300653855,21.815501160434,12.7402619853323,28.4426681261332,5.41227602528035,5.06719730950197,4.04419556011827,5.709193985953,20.1971549244794,23.4538579722423,18.5629299639765,14.0054120023585,12.9144678463393,15.8258772580254,19.0493705559842,13.571991863605,6.92145909656247,7.66376591675532,4.42305275974937,12.1325137460557,7.50861162765338,8.727754556434,5.59175283654366,21.958559775866,17.1746299587033,5.8755122697976,10.3041007075091,2.99951365496704,7.62421362438388,37.4476598512057,22.4175295381127,42.2198623099224,22.0756886644191,24.8043993610421,28.6747501492193,27.418773458451,17.3126918545538,8.21086006026614,9.09801930361229,13.0473950649614,34.2216764991911,28.7377630541841,29.5301892880773,29.086029842293,30.6164246180975,32.0284300712124,30.7341656555911,17.3331258395141,33.1974709116577,41.7924437170881,30.0876422320353,18.1932457914887,21.1315909411454,15.3230953269753,16.25678877622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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=27223 | |||
|HGNC= | |||
|MCL_coexpression_id=321 | |||
|TSSclassifier=NA | |||
|UniProt=E9QL34,A2AU91,P70399,Q3V1P7,Q8BZ87,A2AU89 | |||
|association_with_transcript=0bp_to_ENSMUST00000110645,ENSMUST00000124060,ENSMUST00000136617,ENSMUST00000140285,NM_013735,uc008lye.2,uc008lyg.2,uc008lyh.2,uc012cco.1_5end | |||
|cluster_id=chr2:121097091..121097133,- | |||
|description=CAGE_peak_1_at_Trp53bp1_5end | |||
|id=chr2:121097091..121097133,- | |||
|ontology_enrichment_celltype=CL:0000540!5.02e-12!33;CL:0000047!5.02e-12!33;CL:0000031!5.02e-12!33;CL:0000404!5.02e-12!33;CL:0000117!1.56e-11!23;CL:0000337!1.56e-11!23;CL:0000393!3.04e-08!39;CL:0000211!3.04e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.02e-12,33;CL:0000047,5.02e-12,33;CL:0000031,5.02e-12,33;CL:0000404,5.02e-12,33;CL:0000117,1.56e-11,23;CL:0000337,1.56e-11,23;CL:0000393,3.04e-08,39;CL:0000211,3.04e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.38e-18!71;UBERON:0003075!2.38e-18!71;UBERON:0007284!2.38e-18!71;UBERON:0000033!2.73e-18!63;UBERON:0000153!2.15e-17!94;UBERON:0003056!2.43e-17!49;UBERON:0001017!5.32e-16!73;UBERON:0005743!5.32e-16!73;UBERON:0004121!2.44e-15!102;UBERON:0000924!2.44e-15!102;UBERON:0006601!2.44e-15!102;UBERON:0007811!3.08e-15!86;UBERON:0001049!7.82e-15!52;UBERON:0005068!7.82e-15!52;UBERON:0006241!7.82e-15!52;UBERON:0007135!7.82e-15!52;UBERON:0000073!1.41e-14!75;UBERON:0001016!1.41e-14!75;UBERON:0000955!1.99e-14!50;UBERON:0006238!1.99e-14!50;UBERON:0003080!5.75e-14!40;UBERON:0002616!7.36e-14!49;UBERON:0002780!2.31e-13!39;UBERON:0001890!2.31e-13!39;UBERON:0006240!2.31e-13!39;UBERON:0002020!2.32e-10!34;UBERON:0002791!6.41e-09!29;UBERON:0003528!6.41e-09!29;UBERON:0001893!6.41e-09!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.41e-18,64;UBERON:0003075,1.41e-18,64;UBERON:0007284,1.41e-18,64;UBERON:0003056,2.43e-17,49;UBERON:0010314,4.34e-16,92;UBERON:0010371,4.49e-16,73;UBERON:0001017,5.32e-16,73;UBERON:0000073,1.93e-15,54;UBERON:0004121,4.42e-15,95;UBERON:0000924,4.42e-15,95;UBERON:0006601,4.42e-15,95;UBERON:0001049,7.82e-15,52;UBERON:0005068,7.82e-15,52;UBERON:0006241,7.82e-15,52;UBERON:0007135,7.82e-15,52;UBERON:0001016,1.41e-14,75;UBERON:0003080,5.75e-14,40;UBERON:0000955,2.23e-13,47;UBERON:0006238,2.23e-13,47;UBERON:0002780,2.31e-13,39;UBERON:0001890,2.31e-13,39;UBERON:0006240,2.31e-13,39;UBERON:0002616,8.09e-13,46;UBERON:0002020,2.32e-10,34;UBERON:0003528,6.41e-09,29;UBERON:0002791,6.41e-09,29;UBERON:0001893,6.41e-09,29 | |||
|phase1_expression=26.1042620780814,3.48975407639361,5.0049916332849,3.32710632437513,3.50627010962443,11.5836697619204,8.64366770203445,16.2695387536386,19.7104211012333,28.0877431586392,12.4989116804619,16.2735204350486,12.1552518251156,15.4734112281625,5.3297561890506,4.45445588257617,0,11.6721001182548,10.1464680868247,12.3072999021429,16.8385714499118,11.3191684369009,10.1867917764185,4.7997726838022,3.67054849707472,2.8711598205751,1.7230479846363,5.17130958446134,3.6104449696711,4.03248207615889,5.98672378769323,4.44521471421742,2.46025915033828,0,8.66554859253824,9.47537478543406,11.0251452381679,5.02237956884289,3.1253413780952,6.28228492768558,8.2352408324342,4.09827290975067,6.79714494243615,11.2048167998264,11.2528393653661,12.664725899156,1.56478268869608,3.70642765846759,2.19686182734472,3.69416808241138,4.05960622713551,4.31257693094915,13.5903910906766,7.97898356212479,11.0910953717013,5.14518872071894,4.58453503902011,3.09403255366465,54.4231279712318,35.9713865904982,43.7343668419264,2.37191172448392,4.4464739805557,1.3498495759221,1.97773272513395,1.4209602298922,1.49800055259202,1.53687322128622,36.7061227572011,33.616478644591,40.8030425021681,16.5677570954206,15.4607978666129,39.1970557487853,41.1177070668234,25.7381260250806,20.9220173898839,22.7283461791634,28.5708151856613,54.2052642571097,48.5799387528795,58.8632108729139,16.7509799400829,24.7615548413939,32.0876320331301,32.9984015730508,41.2877874317399,57.9702276516685,3.7863096666592,5.97015324843606,15.3628179011889,3.44169550792555,0,3.2382191498269,4.54843492213368,3.13618820968135,5.47733238513832,8.69194645148094,8.83272415649754,6.00677276667578,21.8307300653855,21.815501160434,12.7402619853323,28.4426681261332,5.41227602528035,5.06719730950197,4.04419556011827,5.709193985953,20.1971549244794,23.4538579722423,18.5629299639765,14.0054120023585,12.9144678463393,15.8258772580254,19.0493705559842,13.571991863605,6.92145909656247,7.66376591675532,4.42305275974937,12.1325137460557,7.50861162765338,8.727754556434,5.59175283654366,21.958559775866,17.1746299587033,5.8755122697976,10.3041007075091,2.99951365496704,7.62421362438388,37.4476598512057,22.4175295381127,42.2198623099224,22.0756886644191,24.8043993610421,28.6747501492193,27.418773458451,17.3126918545538,8.21086006026614,9.09801930361229,13.0473950649614,34.2216764991911,28.7377630541841,29.5301892880773,29.086029842293,30.6164246180975,32.0284300712124,30.7341656555911,17.3331258395141,33.1974709116577,41.7924437170881,30.0876422320353,18.1932457914887,21.1315909411454,15.3230953269753,16.2567887762275,25.6754204195856,6.31991868581911,5.91900186363845,5.11494298912067,16.5700618028402,18.0585066185444,23.0479438670099,24.3847077652767,23.2181793461937,18.357786433598,17.9051137457814,12.8771232671817,14.7124331382634,15.6331857417806,16.2525789438304,10.8632204791447,12.8655988934292,13.173006917463,10.1996878257883,26.2862435705159,41.7792726259895,3.63460661282178,5.02456076660734,27.9407608201156,30.8874773574383,16.4950350492279,15.7313149206207,14.0098167622268,11.7939888189787,5.69434873853414,6.91735609840846,6.53471542880701,10.7436494902221,9.55324026883689,3.59527763461689,5.61958929674205,6.57166201739412,19.1564579962612,24.5634302110917,22.5415471346161,21.5870407516033,19.3952487167626,20.1289803085214,17.3900477091708,14.0229640580622,13.0308944108341,8.63780147452604,4.15033677922008,6.50695912292767,7.86235980452812,4.72210436008193,6.08580364165509,9.40590923034426,8.91190481234969,13.8094145976389,5.5125977103512,5.49122826376163,7.18841032636773,7.81495990103857,8.11297950097858,4.2938409251009,5.02312757861354,4.3419916922703,12.7479701214957,25.012866353704,25.422536324956,19.0114496068211,16.4283173801951,15.7455881995307,15.2347930167049,9.56154874503214,18.2856767163182,10.6303051031412,19.4534817762134,10.3233888270915,9.49767400262426,9.40218880779825,9.04747703635634,5.4390568381871,7.37646409528554,7.17435540392304,22.4770825982909,24.8488775575471,9.3442918864705,8.07906967053994,18.2994767261429,16.3984272604588,21.7577631710127,17.6836910484888,21.3886727119098,20.0984336860071,19.8357243820698,16.3663280430335,16.602086673754,34.7027021735552,18.8780313326997,16.9162323483892,15.8000350572969,19.4664745107592,13.2745138339963,19.1796702562435,12.9999129494843,9.8074641473067,9.7449624650655,13.5271465095328,11.3708448994017,16.3590178264877,7.12994756769443,9.16506598013866,14.7586052004998,15.470331487228,36.4270378156553,34.2116078659489,22.5084109781993,30.4358589744861,28.9064580836906,23.3663151058712,27.8087844817584,24.6616608782825,7.97883807416615,5.50763384245932,13.0111754852428,9.23363016472288,13.2400829890643,10.4944489374991,11.340372680298,10.9974402829191,9.03590593552537,27.8137953015765,5.98048082792484,14.2406938894624,8.70414278637645,6.59289599516419,4.78429797023588,7.32090154260872,18.8676057293179,15.8145141125734,15.7547970137043,4.77335309007557,27.0467274511871,20.5352661798117,18.3609079397062,14.0089158329694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| |||
|short_description=p1@Trp53bp1 | |||
}} |
Latest revision as of 14:50, 25 September 2015
Short description: | p1@Trp53bp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Trp53bp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:321 |
Association with transcript: | 0bp_to_ENSMUST00000110645, ENSMUST00000124060, ENSMUST00000136617, ENSMUST00000140285, NM_013735, uc008lye.2, uc008lyg.2, uc008lyh.2, uc012cco.1_5end |
EntrezGene: | Trp53bp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.02e-12 | 33 |
neuronal stem cell | 5.02e-12 | 33 |
neuroblast | 5.02e-12 | 33 |
electrically signaling cell | 5.02e-12 | 33 |
CNS neuron (sensu Vertebrata) | 1.56e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.56e-11 | 23 |
electrically responsive cell | 3.04e-08 | 39 |
electrically active cell | 3.04e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.41e-18 | 64 |
neural plate | 1.41e-18 | 64 |
presumptive neural plate | 1.41e-18 | 64 |
pre-chordal neural plate | 2.43e-17 | 49 |
structure with developmental contribution from neural crest | 4.34e-16 | 92 |
ecto-epithelium | 4.49e-16 | 73 |
central nervous system | 5.32e-16 | 73 |
regional part of nervous system | 1.93e-15 | 54 |
ectoderm-derived structure | 4.42e-15 | 95 |
ectoderm | 4.42e-15 | 95 |
presumptive ectoderm | 4.42e-15 | 95 |
neural tube | 7.82e-15 | 52 |
neural rod | 7.82e-15 | 52 |
future spinal cord | 7.82e-15 | 52 |
neural keel | 7.82e-15 | 52 |
nervous system | 1.41e-14 | 75 |
anterior neural tube | 5.75e-14 | 40 |
brain | 2.23e-13 | 47 |
future brain | 2.23e-13 | 47 |
regional part of forebrain | 2.31e-13 | 39 |
forebrain | 2.31e-13 | 39 |
future forebrain | 2.31e-13 | 39 |
regional part of brain | 8.09e-13 | 46 |
gray matter | 2.32e-10 | 34 |
brain grey matter | 6.41e-09 | 29 |
regional part of telencephalon | 6.41e-09 | 29 |
telencephalon | 6.41e-09 | 29 |