FFCP PHASE1:Hg19::chr8:133879193..133879209,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7038 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11764 | |||
|TSSclassifier=strong | |||
|UniProt=P01266,E5RG33 | |||
|association_with_transcript=0bp_to_ENST00000220616,ENST00000377869,ENST00000523901,ENST00000543313,NM_003235,uc003ytw.2_5end | |||
|cluster_id=chr8:133879193..133879209,+ | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_1_at_TG_5end | |||
|id=chr8:133879193..133879209,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;6.06e-29;2!UBERON:0004874;1.78e-15;1!UBERON:0005425;2.06e-15;1!UBERON:0000358;2.56e-15;1!UBERON:0007123;1.19e-12;5!UBERON:0004872;5.59e-09;7 | |||
|ontology_enrichment_disease=DOID:178!1.48e-09!1;DOID:326!1.48e-09!1;DOID:3978!1.48e-09!1;DOID:3394!1.48e-09!1;DOID:5844!1.48e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!2.24e-18!2;UBERON:0003127!3.16e-18!2;UBERON:0007023!1.39e-13!115;UBERON:0000989!7.50e-10!1;UBERON:0008811!7.50e-10!1;UBERON:0006258!7.50e-10!1;UBERON:0005876!7.50e-10!1;UBERON:0004874!7.50e-10!1;UBERON:0000941!8.17e-10!1;UBERON:0004904!8.17e-10!1;UBERON:0002464!8.17e-10!1;UBERON:0001021!8.17e-10!1;UBERON:0001785!8.17e-10!1;UBERON:0007029!8.91e-10!1;UBERON:0001301!1.76e-09!1;UBERON:0002372!1.91e-09!1;UBERON:0001961!1.91e-09!1;UBERON:0001744!1.91e-09!1;UBERON:0001735!1.91e-09!1;UBERON:0007190!2.26e-09!1;UBERON:0001882!2.46e-09!1;UBERON:0005403!2.46e-09!1;UBERON:0002022!2.67e-09!1;UBERON:0000974!3.22e-08!10;UBERON:0002046!6.08e-08!5;UBERON:0004117!6.08e-08!5;UBERON:0007689!6.08e-08!5;UBERON:0007123!6.08e-08!5;UBERON:0003091!6.08e-08!5;UBERON:0009722!1.50e-07!11;UBERON:0007690!1.50e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;8.05e-30;2!UBERON:0003127;1.44e-29;2!UBERON:0000989;1.78e-15;1!UBERON:0008811;1.78e-15;1!UBERON:0000941;2.06e-15;1!UBERON:0001785;2.06e-15;1!UBERON:0002464;2.06e-15;1!UBERON:0004904;2.06e-15;1!UBERON:0001021;2.06e-15;1!UBERON:0007029;2.56e-15;1!UBERON:0002046;1.19e-12;5!UBERON:0000974;1.30e-10;6!UBERON:0003126;3.73e-09;7!UBERON:0001005;3.73e-09;7!UBERON:0003714;2.31e-08;2!UBERON:0005162;2.31e-08;2!UBERON:0000122;2.31e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,8.05e-30,2;UBERON:0003127,1.44e-29,2;UBERON:0000989,1.78e-15,1;UBERON:0008811,1.78e-15,1;UBERON:0006258,1.78e-15,1;UBERON:0005876,1.78e-15,1;UBERON:0004874,1.78e-15,1;UBERON:0000941,2.06e-15,1;UBERON:0001785,2.06e-15,1;UBERON:0002464,2.06e-15,1;UBERON:0004904,2.06e-15,1;UBERON:0001021,2.06e-15,1;UBERON:0003902,2.06e-15,1;UBERON:0005425,2.06e-15,1;UBERON:0007029,2.38e-15,1;UBERON:0002046,1.19e-12,5;UBERON:0004117,1.19e-12,5;UBERON:0007689,1.19e-12,5;UBERON:0007123,1.19e-12,5;UBERON:0003091,1.19e-12,5;UBERON:0003126,3.73e-09,7;UBERON:0001005,3.73e-09,7;UBERON:0003714,2.31e-08,2;UBERON:0005162,2.31e-08,2;UBERON:0000122,2.31e-08,2;UBERON:0007023,2.91e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.0789261084222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853828638089378,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,8.56616521554926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,9.42801238939659,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,74.429333075908,0,0,0,0,0,0,0,0,0,0,0,0,7.77137588894623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,883.854854979566,7774.47013831137,0,0.434523000071005,0,17454.4057447291,21081.4291599091,0,0,0.134704106029175,87.5010905790651,125.745614774393,0,0,0,0,7.03922827210363,0,0.813792356631477,0,3.01910690386539,0 | |||
|short_description=p1@TG | |||
}} |
Latest revision as of 11:29, 16 September 2015
Short description: | p1@TG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TG_5end |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | 0bp_to_ENST00000220616, ENST00000377869, ENST00000523901, ENST00000543313, NM_003235, uc003ytw.2_5end |
EntrezGene: | TG |
HGNC: | 11764 |
UniProt: | P01266E5RG33 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 8.05e-30 | 2 |
open tracheal system trachea | 1.44e-29 | 2 |
penis | 1.78e-15 | 1 |
intromittent organ | 1.78e-15 | 1 |
lateral plate mesenchyme | 1.78e-15 | 1 |
undifferentiated genital tubercle | 1.78e-15 | 1 |
somatopleure | 1.78e-15 | 1 |
cranial nerve II | 2.06e-15 | 1 |
cranial nerve | 2.06e-15 | 1 |
nerve trunk | 2.06e-15 | 1 |
nerve connecting eye with brain | 2.06e-15 | 1 |
nerve | 2.06e-15 | 1 |
retinal neural layer | 2.06e-15 | 1 |
presumptive neural retina | 2.06e-15 | 1 |
surface | 2.38e-15 | 1 |
thyroid gland | 1.19e-12 | 5 |
pharyngeal pouch | 1.19e-12 | 5 |
thyroid diverticulum | 1.19e-12 | 5 |
pharyngeal pouch 2 | 1.19e-12 | 5 |
thyroid primordium | 1.19e-12 | 5 |
trachea | 3.73e-09 | 7 |
respiratory airway | 3.73e-09 | 7 |
neural tissue | 2.31e-08 | 2 |
multi cell component structure | 2.31e-08 | 2 |
neuron projection bundle | 2.31e-08 | 2 |
adult organism | 2.91e-07 | 114 |