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FFCP PHASE1:Mm9::chr5:29704877..29704941,-: Difference between revisions

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{{FFCP|EntrezGene=56873|HGNC=|MCL_coexpression_id=1301|UniProt=Q9JIT0|association_with_transcript=0bp_to_ENSMUST00000055195,NM_020295,uc008wug.1,uc008wuh.1,uc008wui.1,uc012dtv.1_5end|description=CAGE_peak_1_at_Lmbr1_5end|id=chr5:29704877..29704941,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!1.70e-10!333;UBERON:0004111!3.37e-10!122;UBERON:0001049!8.21e-10!52;UBERON:0005068!8.21e-10!52;UBERON:0006241!8.21e-10!52;UBERON:0007135!8.21e-10!52;UBERON:0000033!1.93e-09!63;UBERON:0000025!2.58e-09!114;UBERON:0000955!4.40e-09!50;UBERON:0006238!4.40e-09!50;UBERON:0007023!9.04e-09!51;UBERON:0002616!1.20e-08!49;UBERON:0002020!4.49e-08!34;UBERON:0004121!1.06e-07!102;UBERON:0000924!1.06e-07!102;UBERON:0006601!1.06e-07!102;UBERON:0002346!1.88e-07!71;UBERON:0003075!1.88e-07!71;UBERON:0007284!1.88e-07!71;UBERON:0002021!2.14e-07!10;UBERON:0000411!2.14e-07!10;UBERON:0001950!2.14e-07!10;UBERON:0000922!2.94e-07!328;UBERON:0003056!4.03e-07!49;UBERON:0003080!7.46e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.44e-11,73;UBERON:0010314,1.10e-10,92;UBERON:0000073,1.68e-10,54;UBERON:0004111,3.37e-10,122;UBERON:0001049,8.21e-10,52;UBERON:0005068,8.21e-10,52;UBERON:0006241,8.21e-10,52;UBERON:0007135,8.21e-10,52;UBERON:0000025,2.58e-09,114;UBERON:0002346,4.43e-09,64;UBERON:0003075,4.43e-09,64;UBERON:0007284,4.43e-09,64;UBERON:0004121,5.78e-09,95;UBERON:0000924,5.78e-09,95;UBERON:0006601,5.78e-09,95;UBERON:0007023,9.04e-09,51;UBERON:0002020,4.49e-08,34;UBERON:0000955,6.45e-08,47;UBERON:0006238,6.45e-08,47;UBERON:0002616,1.68e-07,46;UBERON:0002021,2.14e-07,10;UBERON:0000411,2.14e-07,10;UBERON:0001950,2.14e-07,10;UBERON:0003056,4.03e-07,49;UBERON:0003080,7.46e-07,40|phase1_expression=20.979498970728,16.0528687514106,23.2049612088663,26.9193148063079,21.0376206577466,19.3061162698673,20.0906870912152,5.16493293766305,0.985521055061667,1.40438715793196,2.39705155515707,2.55270908785077,6.33442700745461,4.45844052336887,5.3297561890506,4.25198061518635,2.79824751251259,2.99689057090326,5.07323404341233,2.54633791078818,28.2343723301552,0.198581902401771,0,14.7193028969934,17.2056960800378,23.5435105287158,18.0920038386811,15.9448712187558,16.1519906537918,15.6258680451157,15.9645967671819,6.98533740805594,7.38077745101484,0,20.7973166220918,19.2832188615851,16.9460565697766,2.92972141515835,1.5626706890476,2.61761871986899,3.52938892818609,0.683045484958446,1.45653105909346,34.1180376713814,28.0814099478055,23.4939842766952,4.69434806608824,5.66865406589161,7.68901639570651,10.8880743481599,6.99932108126813,4.31257693094915,2.01339127269284,5.07753499407941,4.7053131879945,19.294457702696,32.951345592957,26.814948798427,19.8270131642406,26.9785399428737,25.3532561402472,5.42151251310611,5.33576877666684,2.2497492932035,1.97773272513395,6.3943210345149,7.78960287347852,7.68436610643109,14.7239249478038,15.5256829081444,16.6156719467592,31.4216082844184,28.2711732418065,13.9639511105048,13.801747826626,13.7882817991503,42.9451935897616,31.5387725070414,34.1006503828861,24.0033043668953,22.4144726825904,31.7757156039624,34.8978748751726,34.8912818219642,33.4628162631214,41.5426305517871,34.7386901149811,32.4335035736023,5.98236927332154,10.8067330952703,26.3776684718527,12.9063581547208,2.719885334831,6.47643829965381,12.3457519315057,12.5447528387254,14.3253308534387,16.3613109674935,10.6512261887176,8.48014978824817,21.6898866456088,24.3820307087204,28.028576367731,21.3320010945999,14.2884087067401,12.1612735428047,14.6602089054287,15.6431915215112,25.63485048107,23.0085315550478,12.4909435271618,14.3098774806706,12.4532368518272,13.7157602902887,20.5780237487483,12.1896593589785,60.809962062656,30.0766662393416,8.84610551949874,14.3972496453194,15.0172232553068,16.9706338597328,27.9587641827183,60.6056249813903,50.4766563420427,17.1156226989756,3.11519323715393,3.59941638596045,3.17675567682662,52.8760957099024,37.5150494311274,34.1779837746991,52.6687690182598,46.7959286914505,47.3756741595797,47.2122075527175,21.7936238639677,19.1586734739543,38.6665820403522,43.1405804567272,17.1758984710769,16.0931473103431,17.8261508507296,18.0845781402858,25.3776141834453,25.8789714975397,19.7710638821028,34.9249550497671,8.191583731448,15.5066985737612,18.8267702855425,15.1245055375027,20.8535436919198,28.9049298213398,30.6615383247836,14.3304672109315,3.51106593656617,3.60287069960601,2.55747149456033,15.7415587126981,14.540615718828,22.8678818055489,24.1479630296914,24.2020005049307,24.8370051748679,29.5318109833018,27.0956135413615,26.2722020326131,24.1902979372816,32.1768229595027,35.0217257238097,36.9885968186091,34.2498179854039,34.0884303651344,40.1653801757483,33.5469036356467,22.1380584599145,25.6517049663638,13.4371597837197,19.5078804362768,25.5157573417745,26.0171746764112,28.4643896121434,26.8218132818708,15.6594590309689,26.5165317105658,23.3741744184251,27.2570366696377,24.9554031512474,16.1787493557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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=56873
|HGNC=
|MCL_coexpression_id=1301
|TSSclassifier=NA
|UniProt=Q9JIT0
|association_with_transcript=0bp_to_ENSMUST00000055195,NM_020295,uc008wug.1,uc008wuh.1,uc008wui.1,uc012dtv.1_5end
|cluster_id=chr5:29704877..29704941,-
|description=CAGE_peak_1_at_Lmbr1_5end
|id=chr5:29704877..29704941,-
|ontology_enrichment_celltype=
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|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.44e-11,73;UBERON:0010314,1.10e-10,92;UBERON:0000073,1.68e-10,54;UBERON:0004111,3.37e-10,122;UBERON:0001049,8.21e-10,52;UBERON:0005068,8.21e-10,52;UBERON:0006241,8.21e-10,52;UBERON:0007135,8.21e-10,52;UBERON:0000025,2.58e-09,114;UBERON:0002346,4.43e-09,64;UBERON:0003075,4.43e-09,64;UBERON:0007284,4.43e-09,64;UBERON:0004121,5.78e-09,95;UBERON:0000924,5.78e-09,95;UBERON:0006601,5.78e-09,95;UBERON:0007023,9.04e-09,51;UBERON:0002020,4.49e-08,34;UBERON:0000955,6.45e-08,47;UBERON:0006238,6.45e-08,47;UBERON:0002616,1.68e-07,46;UBERON:0002021,2.14e-07,10;UBERON:0000411,2.14e-07,10;UBERON:0001950,2.14e-07,10;UBERON:0003056,4.03e-07,49;UBERON:0003080,7.46e-07,40
|phase1_expression=20.979498970728,16.0528687514106,23.2049612088663,26.9193148063079,21.0376206577466,19.3061162698673,20.0906870912152,5.16493293766305,0.985521055061667,1.40438715793196,2.39705155515707,2.55270908785077,6.33442700745461,4.45844052336887,5.3297561890506,4.25198061518635,2.79824751251259,2.99689057090326,5.07323404341233,2.54633791078818,28.2343723301552,0.198581902401771,0,14.7193028969934,17.2056960800378,23.5435105287158,18.0920038386811,15.9448712187558,16.1519906537918,15.6258680451157,15.9645967671819,6.98533740805594,7.38077745101484,0,20.7973166220918,19.2832188615851,16.9460565697766,2.92972141515835,1.5626706890476,2.61761871986899,3.52938892818609,0.683045484958446,1.45653105909346,34.1180376713814,28.0814099478055,23.4939842766952,4.69434806608824,5.66865406589161,7.68901639570651,10.8880743481599,6.99932108126813,4.31257693094915,2.01339127269284,5.07753499407941,4.7053131879945,19.294457702696,32.951345592957,26.814948798427,19.8270131642406,26.9785399428737,25.3532561402472,5.42151251310611,5.33576877666684,2.2497492932035,1.97773272513395,6.3943210345149,7.78960287347852,7.68436610643109,14.7239249478038,15.5256829081444,16.6156719467592,31.4216082844184,28.2711732418065,13.9639511105048,13.801747826626,13.7882817991503,42.9451935897616,31.5387725070414,34.1006503828861,24.0033043668953,22.4144726825904,31.7757156039624,34.8978748751726,34.8912818219642,33.4628162631214,41.5426305517871,34.7386901149811,32.4335035736023,5.98236927332154,10.8067330952703,26.3776684718527,12.9063581547208,2.719885334831,6.47643829965381,12.3457519315057,12.5447528387254,14.3253308534387,16.3613109674935,10.6512261887176,8.48014978824817,21.6898866456088,24.3820307087204,28.028576367731,21.3320010945999,14.2884087067401,12.1612735428047,14.6602089054287,15.6431915215112,25.63485048107,23.0085315550478,12.4909435271618,14.3098774806706,12.4532368518272,13.7157602902887,20.5780237487483,12.1896593589785,60.809962062656,30.0766662393416,8.84610551949874,14.3972496453194,15.0172232553068,16.9706338597328,27.9587641827183,60.6056249813903,50.4766563420427,17.1156226989756,3.11519323715393,3.59941638596045,3.17675567682662,52.8760957099024,37.5150494311274,34.1779837746991,52.6687690182598,46.7959286914505,47.3756741595797,47.2122075527175,21.7936238639677,19.1586734739543,38.6665820403522,43.1405804567272,17.1758984710769,16.0931473103431,17.8261508507296,18.0845781402858,25.3776141834453,25.8789714975397,19.7710638821028,34.9249550497671,8.191583731448,15.5066985737612,18.8267702855425,15.1245055375027,20.8535436919198,28.9049298213398,30.6615383247836,14.3304672109315,3.51106593656617,3.60287069960601,2.55747149456033,15.7415587126981,14.540615718828,22.8678818055489,24.1479630296914,24.2020005049307,24.8370051748679,29.5318109833018,27.0956135413615,26.2722020326131,24.1902979372816,32.1768229595027,35.0217257238097,36.9885968186091,34.2498179854039,34.0884303651344,40.1653801757483,33.5469036356467,22.1380584599145,25.6517049663638,13.4371597837197,19.5078804362768,25.5157573417745,26.0171746764112,28.4643896121434,26.8218132818708,15.6594590309689,26.5165317105658,23.3741744184251,27.2570366696377,24.9554031512474,16.178749355776,24.8558757355898,25.490082976559,7.96605184002943,17.8227679671177,19.1603150644237,20.3651327845314,21.3347735884388,21.7421041659988,27.5711301861762,22.2891323449199,21.351826986427,22.7050781616113,19.862326014839,12.0128476115588,11.7935397067922,15.0657615297852,14.6059287399722,11.0941493486112,11.4581633301639,14.9601991474422,11.6737363278025,6.04035109013779,23.0029130443767,13.7692150637346,14.6657706363843,16.1650481886152,11.8402292924462,13.9908621195376,28.6367444758237,11.1799932944586,15.4816727619925,16.2955282344181,22.7649540839847,28.3085575076669,24.2804513703734,30.050581770101,27.5861502185834,24.3611158613652,24.556034373253,27.2013102428125,22.2763626607005,29.2191098334653,9.04747703635634,5.4390568381871,29.5058563811422,34.2161565417868,40.9404004468869,47.1190980100657,10.3279015587306,24.9946217932329,11.6738041184015,12.1036010731958,18.3109888072879,10.5146271099123,13.8135177931084,16.4184387857523,9.71545684019746,11.3979784585412,11.4633455604492,38.5585579706168,25.2653351670718,14.2452482933804,25.0845917404507,35.9634868080127,18.5843193675948,15.0523994416088,13.6045600634138,17.9174825768103,9.15435867930396,24.2873766875703,24.0338312646446,18.1766864738753,16.3988794056972,14.2216541071117,15.8127912862498,13.4076206222643,40.8527526904546,16.7456817449118,11.3835641728824,16.5039516974326,21.4581682707151,20.5124140242381,24.517804069716,15.5277124048446,20.4164386015428,34.7404596216665,25.3607657763206,57.0506435177521,44.8871106214617,32.0261631368508,28.7687349047559,26.4266848589549,23.9014286036478,48.766854428764,5.12612642393558,13.2087595496462,14.6303676622072,13.5625289043378,9.02181902958766,7.0921233694022,6.11922347977879,5.73800954526998,7.18639863783004,18.1387417422872,11.5462637657114,22.9750997853339,20.088993392855,23.8360657456494,25.5484199583028,23.7361249637284,27.0276800221848,20.4169634747543,35.3848877086595,19.8828580187816,33.8215763210514,13.6060056900021,10.9202603701684,14.9727415024917,14.7242198764613,16.2197880471147,19.9507305697782,21.2233147295639,31.6675220165647,38.895043452987,43.2045009386798,8.53230025696081,10.5417111950885,9.86025188782342,11.5629532450238,11.6367352183863,10.9274745129696,9.97622231015741,11.6674726467916,12.1159739937777,14.707913684415,12.3007945866945,9.35595655101623,8.37043022270866,10.6357980985228,28.3412979519014,6.65957860122194,5.65197296639697,8.22634620183984,45.9791233796613,22.5218970541418,20.8792851664682,21.6512062869857,21.5676004735206,48.5686584650677,44.6515479411962,52.7063872364245,44.6818274093588,36.309373547844,46.8344216381614,42.5264175146038,45.032120322422,43.5016712624836,47.6339486811674,8.40677515431831,22.7444177838588,17.4148277869217,19.2054306483952,8.59413966774727,13.7882631337511,29.7810615254164,30.4931884713563,26.9572136057125,28.3020877175453,23.3200955899021,27.350819500981,23.87858440482,28.5552179725717,23.0890585201565,23.8146845641537,21.7862532776328,27.3931093058461,17.3076078337389,24.8766175027131,25.7151939289062,27.6862257608566,26.2279808942053,28.4878976599364,25.5977514729699,24.4536216806945,26.8904120122976,26.83311056666,22.6792870122589,30.3016826695179,22.7779234798414,23.6410757701352,20.4615521584845,26.4941998428002,23.7275131506804,25.4806789496705,21.5217079769776,30.941431782955,32.3277281196345,21.397367654593,24.1142549045238
|short_description=p1@Lmbr1
}}

Latest revision as of 21:32, 25 September 2015

Short description:p1@Lmbr1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lmbr1_5end
Coexpression cluster:MCL_coexpression_mm9:1301
Association with transcript: 0bp_to_ENSMUST00000055195, NM_020295, uc008wug.1, uc008wuh.1, uc008wui.1, uc012dtv.1_5end
EntrezGene:Lmbr1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lmbr1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G720.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I516.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I623.20
CD326+ enterocyte, pool1.CNhs13542.11848-124I326.92
CD326+ enterocyte, pool2.CNhs13197.11849-124I421.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I719.31
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I820.09
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.16
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.55
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.33
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.46
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.25
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.07
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A328.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D114.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D217.21
GP2+ M cell, pool1.CNhs13228.11845-124H923.54
GP2+ M cell, pool2.CNhs13231.11846-124I118.09
GP2+ M cell, pool3.CNhs13240.11847-124I215.94
Ileum epithelium, pool1.CNhs13199.10252-104B916.15
Ileum epithelium, pool2.CNhs13232.10253-104C115.63
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C815.96
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G67.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F520.80
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F619.28
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F716.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D834.12
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D928.08
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B323.49
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.67
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.69
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.89
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C119.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E132.95
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C526.81
Mouse Granule cells, donor1.CNhs12131.11713-123C319.83
Mouse Granule cells, donor2.CNhs12357.11731-123E326.98
Mouse Granule cells, donor3.CNhs12108.11636-122C725.35
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.42
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D26.39
Mouse Microglia, donor1.CNhs12629.11718-123C87.79
Mouse Microglia, donor2.CNhs12634.11736-123E87.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.72
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F515.53
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D916.62
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F131.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D528.27
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D213.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F213.80
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D613.79
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D342.95
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F331.54
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D734.10
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D424.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F422.41
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D831.78
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E434.90
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E534.89
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I633.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D641.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F634.74
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E132.43
Mouse Schwann, donor1.CNhs12507.11728-123D95.98
Mouse Schwann, donor2.CNhs12573.11746-123F910.81
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G326.38
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.91
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C86.48
Mouse hepatocyte, donor6.CNhs13090.11822-124F412.35
Mouse hepatocyte, donor8.CNhs13091.11824-124F612.54
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A714.33
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I716.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E310.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.48
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G621.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H124.38
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I828.03
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G114.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G212.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G314.66
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.64
accessory axillary lymph node, adult.CNhs10475.1063-29H925.63
adrenal gland, adult.CNhs10508.49-24D723.01
adrenal gland, embryo E14.CNhs11038.406-44C512.49
adrenal gland, embryo E16.CNhs11004.1254-43D614.31
adrenal gland, embryo E17.CNhs11043.1263-45I112.45
adrenal gland, embryo E18.CNhs11026.1262-18F513.72
adrenal gland, neonate N00.CNhs11191.1311-23C120.58
adrenal gland, neonate N25.CNhs11223.1377-27I312.19
amnion, adult pregnant day17.5.CNhs10488.583-22A860.81
aorta, adult.CNhs10498.46-23H130.08
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F514.40
bone (os femoris), neonate N16.CNhs11225.1525-43A615.02
bone (os femoris), neonate N20.CNhs11195.1350-25C316.97
cecum, adult.CNhs10467.37-13H427.96
cerebellum, adult.CNhs10494.15-8B260.61
cerebellum, neonate N30.CNhs11135.1395-42I250.48
colon, adult.CNhs10468.36-18H717.12
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.18
corpora quadrigemina, adult.CNhs10501.16-22A452.88
corpus striatum, adult.CNhs10487.19-21D837.52
corpus striatum, neonate N00.CNhs11226.630-43F134.18
cortex, adult.CNhs10473.12-14D552.67
cortex, neonate N30.CNhs11107.1392-42F246.80
diencephalon, adult.CNhs10482.20-12F247.38
diencephalon, neonate N30.CNhs11201.1388-42B247.21
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B121.79
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A219.16
epididymis, adult.CNhs10490.58-23B238.67
eyeball, adult.CNhs10484.31-12G443.14
eyeball, embryo E12.CNhs11016.345-16C617.18
eyeball, embryo E14.CNhs10521.399-16E216.09
eyeball, embryo E15.CNhs10593.426-16C917.83
eyeball, embryo E17.CNhs11023.1261-18D418.08
eyeball, neonate N00.CNhs11207.633-15C625.38
eyeball, neonate N01.CNhs11140.1532-43E725.88
eyeball, neonate N02.CNhs11205.1551-44G819.77
eyeball, neonate N16.CNhs11188.777-19A234.92
forelimb, embryo E11.CNhs10596.335-25E28.19
forelimb, embryo E12.CNhs10600.359-14H215.51
forelimb, embryo E13.CNhs10589.384-1E218.83
forelimb, embryo E14.CNhs10577.413-26A815.12
forelimb, embryo E15.CNhs11007.437-20E720.85
forelimb, embryo E17.CNhs10598.1517-43C428.90
forelimb, embryo E18.CNhs11008.1520-43B530.66
gonad, embryo E13.CNhs11044.1564-45I614.33
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.60
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.56
heart, embryo E11.CNhs10586.331-24E915.74
heart, embryo E12.CNhs11015.353-12F514.54
heart, embryo E13.CNhs11013.376-3I922.87
heart, embryo E14.CNhs10597.403-26D424.15
heart, embryo E15.CNhs11017.431-16C824.20
heart, embryo E16.CNhs11021.457-17C624.84
heart, embryo E17.CNhs11025.479-18E529.53
heart, embryo E18.CNhs11030.1283-20G327.10
heart, neonate N00.CNhs11213.639-21E326.27
heart, neonate N03.CNhs11221.1349-25I224.19
heart, neonate N10.CNhs11118.749-24G132.18
heart, neonate N16.CNhs11209.782-15G135.02
heart, neonate N20.CNhs11127.821-26I636.99
heart, neonate N25.CNhs11196.1351-25D334.25
heart, neonate N30.CNhs11202.1390-42D234.09
hippocampus, adult.CNhs10478.13-16E840.17
hippocampus, neonate N00.CNhs11228.627-43G133.55
intestinal mucosa, adult.CNhs10506.860-29I322.14
intestine, adult.CNhs10496.178-9A325.65
intestine, embryo E12.CNhs11019.1251-16I513.44
intestine, embryo E13.CNhs11010.381-16D519.51
intestine, embryo E15.CNhs10602.976-16D825.52
intestine, embryo E16.CNhs10585.463-22H426.02
intestine, embryo E17.CNhs10582.482-18D328.46
intestine, embryo E18.CNhs10526.1289-20F726.82
intestine, neonate N00.CNhs11126.644-26D115.66
intestine, neonate N01.CNhs11192.1322-23E926.52
intestine, neonate N06.CNhs11102.688-20B823.37
intestine, neonate N07.CNhs11095.720-20F227.26
intestine, neonate N10.CNhs11098.755-23A524.96
intestine, neonate N20.CNhs11187.827-18D116.18
intestine, neonate N25.CNhs11121.1352-25E324.86
intestine, neonate N30.CNhs11131.1384-42G125.49
kidney, embryo E14.CNhs10606.411-4I97.97
kidney, embryo E15.CNhs10997.434-16F817.82
kidney, embryo E16.CNhs10584.464-22A519.16
kidney, embryo E17.CNhs11028.483-18I220.37
kidney, embryo E18.CNhs11001.1288-20C721.33
kidney, neonate N00.CNhs11214.646-21G721.74
kidney, neonate N10.CNhs11206.758-6D527.57
kidney, neonate N20.CNhs11113.832-19I122.29
kidney, neonate N25.CNhs11122.1353-25F321.35
kidney, neonate N30.CNhs11203.1385-42H122.71
liver, adult pregnant day01.CNhs10466.508-5B219.86
liver, embryo E12.CNhs10601.355-15F812.01
liver, embryo E13.CNhs10524.378-3H611.79
liver, embryo E14.CNhs10594.409-16E115.07
liver, embryo E15.CNhs10520.433-16D714.61
liver, embryo E16.CNhs10523.462-17F511.09
liver, embryo E17.CNhs10510.481-18A311.46
liver, embryo E18.CNhs10579.499-43G414.96
liver, neonate N00.CNhs11117.641-24F411.67
liver, neonate N03.CNhs11123.1345-25G26.04
liver, neonate N06.CNhs11101.684-20A823.00
liver, neonate N07.CNhs11103.716-20H213.77
liver, neonate N10.CNhs11115.751-24B914.67
liver, neonate N20.CNhs11220.823-25A316.17
liver, neonate N25.CNhs11198.1368-26H111.84
liver, neonate N30.CNhs11106.1382-42D113.99
lung, adult.CNhs10474.28-22B128.64
lung, embryo E12.CNhs10522.354-16G211.18
lung, embryo E14.CNhs10604.404-26F815.48
lung, embryo E15.CNhs11020.432-17C516.30
lung, embryo E16.CNhs10998.458-17B622.76
lung, embryo E17.CNhs10605.480-44A628.31
lung, embryo E18.CNhs10583.1287-20I624.28
lung, neonate N00.CNhs11224.640-42C630.05
lung, neonate N06.CNhs11212.683-20E527.59
lung, neonate N07.CNhs11111.715-19A324.36
lung, neonate N10.CNhs11219.750-23E624.56
lung, neonate N20.CNhs11109.822-18A427.20
lung, neonate N25.CNhs11119.1359-25C722.28
lung, neonate N30.CNhs11133.1394-42H229.22
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.44
mammary gland, adult lactating day02.CNhs10480.595-22B629.51
mammary gland, adult pregnant day19.CNhs10476.588-5H234.22
medulla oblongata, adult.CNhs10477.17-12C240.94
medulla oblongata, neonate N30.CNhs11200.1396-42A347.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C710.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C224.99
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.67
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.10
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E318.31
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.51
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D813.81
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D916.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D49.72
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.40
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.46
olfactory brain, adult.CNhs10489.18-22I938.56
ovary, adult.CNhs10507.91-2I725.27
ovary, embryo E18.CNhs11040.505-44H714.25
ovary, neonate N00.CNhs11217.1299-22I425.08
oviduct, adult pregnant day01.CNhs10500.988-6G635.96
pancreas, adult.CNhs10486.34-16E418.58
pancreas, embryo E14.CNhs11012.405-44F415.05
pancreas, embryo E15.CNhs11042.1556-45F213.60
pancreas, embryo E16.CNhs11003.460-26E517.92
pancreas, embryo E17.CNhs10599.1558-45G39.15
pancreas, embryo E18.CNhs10580.1535-43I724.29
pancreas, neonate N00.CNhs11105.645-26G924.03
pancreas, neonate N01.CNhs11138.1531-43D718.18
pancreas, neonate N02.CNhs11139.1539-43D816.40
pancreas, neonate N16.CNhs11136.787-43B614.22
pancreas, neonate N25.CNhs11094.1555-45E215.81
pancreas, neonate N30.CNhs11182.1548-44H513.41
pituitary gland, adult.CNhs10493.21-1G840.85
pituitary gland, embryo E12.CNhs11018.346-16E616.75
pituitary gland, embryo E13.CNhs11009.370-44C711.38
pituitary gland, embryo E14.CNhs11037.398-44A516.50
pituitary gland, embryo E15.CNhs10592.427-16B921.46
pituitary gland, embryo E16.CNhs11036.449-43F620.51
pituitary gland, embryo E17.CNhs11039.1265-44F524.52
pituitary gland, neonate N00.CNhs11190.1308-22E915.53
placenta, adult pregnant day10.CNhs10472.539-13I720.42
placenta, adult pregnant day17.CNhs10464.577-18G334.74
prostate, adult.CNhs10470.859-1F825.36
skin, adult.CNhs10492.30-1C357.05
skin, neonate N00.CNhs11124.650-25G444.89
skin, neonate N03.CNhs11215.662-22H332.03
skin, neonate N06.CNhs11097.693-20I528.77
skin, neonate N10.CNhs11108.762-6C426.43
small intestine, neonate N16.CNhs11114.790-21I123.90
spinal cord, adult.CNhs10505.24-13C948.77
spleen, adult.CNhs10465.25-2G25.13
spleen, embryo E16.CNhs11035.461-43C113.21
spleen, embryo E18.CNhs11011.1271-21F214.63
spleen, neonate N10.CNhs11116.752-24D113.56
spleen, neonate N20.CNhs11112.824-19H19.02
spleen, neonate N25.CNhs11099.1354-25G37.09
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.19
stomach, adult.CNhs10503.33-1H618.14
stomach, embryo E12.CNhs10588.356-43E311.55
stomach, embryo E15.CNhs10603.1252-16G822.98
stomach, embryo E16.CNhs11022.459-17D420.09
stomach, embryo E17.CNhs11006.1035-18D523.84
stomach, embryo E18.CNhs10999.1286-20C625.55
stomach, neonate N03.CNhs11193.1340-24B823.74
stomach, neonate N07.CNhs11210.718-18A927.03
stomach, neonate N25.CNhs11104.1355-25E420.42
stomach, neonate N30.CNhs11134.1386-42I135.38
submandibular gland, adult.CNhs10469.59-29C119.88
testis, adult.CNhs10504.57-7G533.82
testis, embryo E13.CNhs11031.389-23F513.61
testis, embryo E15.CNhs11034.443-27C510.92
testis, embryo E16.CNhs11033.470-26G514.97
testis, embryo E17.CNhs11029.486-18I514.72
testis, embryo E18.CNhs11027.503-18G516.22
testis, neonate N00.CNhs11189.1300-22B719.95
testis, neonate N07.CNhs11222.726-26I421.22
testis, neonate N10.CNhs11204.763-44D931.67
testis, neonate N20.CNhs11110.839-18H338.90
testis, neonate N30.CNhs11130.1391-42E243.20
thymus, adult.CNhs10471.38-12B58.53
thymus, embryo E14.CNhs11041.402-44I410.54
thymus, embryo E15.CNhs11005.430-45I29.86
thymus, embryo E16.CNhs11002.456-26C511.56
thymus, embryo E17.CNhs10581.478-18C111.64
thymus, embryo E18.CNhs10595.1273-19G410.93
thymus, neonate N02.CNhs11181.1541-43F89.98
thymus, neonate N03.CNhs11137.2104-43C711.67
thymus, neonate N06.CNhs11197.681-26C412.12
thymus, neonate N07.CNhs11211.713-19D314.71
thymus, neonate N10.CNhs11194.748-24E412.30
thymus, neonate N20.CNhs11186.820-7A29.36
thymus, neonate N25.CNhs11125.1362-25G78.37
thymus, neonate N30.CNhs11132.1393-42G210.64
tongue, adult.CNhs10499.32-1B428.34
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.65
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.23
urinary bladder, adult.CNhs10481.879-12E445.98
uterus, adult pregnant day19.CNhs10497.590-15F522.52
uterus, adult.CNhs10509.92-27E520.88
vagina, adult.CNhs10502.89-27D521.65
vesicular gland, adult.CNhs10491.51-27F821.57
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A148.57
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A244.65
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A352.71
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D744.68
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A436.31
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A546.83
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A642.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A745.03
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A843.50
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A947.63
whole body, embryo E11.CNhs11014.324-5I88.41
whole body, embryo E12.CNhs10587.857-27C922.74
whole body, embryo E13.CNhs10512.372-23H217.41
whole body, embryo E14.5.CNhs10578.420-27D219.21
whole body, embryo E14.CNhs10519.395-14B18.59
whole body, embryo E16.CNhs10514.453-14F213.79
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G529.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G530.49
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G526.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G528.30
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G523.32
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G527.35
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G523.88
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G528.56
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G523.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G523.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G521.79
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G527.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G517.31
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G524.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G525.72
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G527.69
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G526.23
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G528.49
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G525.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G524.45
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G526.89
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G526.83
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G522.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G530.30
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G522.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G523.64
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G520.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G526.49
whole body, embryo E17.5.CNhs10513.490-9F923.73
whole body, embryo E17.CNhs10517.475-3I525.48
whole body, embryo E18.CNhs10516.493-3B321.52
whole body, neonate N00.CNhs10525.657-19C230.94
whole body, neonate N01.CNhs10576.659-23C632.33
whole body, neonate N06.CNhs10515.692-21D121.40
whole body, neonate N10.CNhs10518.761-6B424.11





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ecto-epithelium1.44e-1173
structure with developmental contribution from neural crest1.10e-1092
regional part of nervous system1.68e-1054
anatomical conduit3.37e-10122
neural tube8.21e-1052
neural rod8.21e-1052
future spinal cord8.21e-1052
neural keel8.21e-1052
tube2.58e-09114
neurectoderm4.43e-0964
neural plate4.43e-0964
presumptive neural plate4.43e-0964
ectoderm-derived structure5.78e-0995
ectoderm5.78e-0995
presumptive ectoderm5.78e-0995
adult organism9.04e-0951
gray matter4.49e-0834
brain6.45e-0847
future brain6.45e-0847
regional part of brain1.68e-0746
occipital lobe2.14e-0710
visual cortex2.14e-0710
neocortex2.14e-0710
pre-chordal neural plate4.03e-0749
anterior neural tube7.46e-0740
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