FFCP PHASE1:Hg19::chr9:127023648..127023661,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10783 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7749 | |||
|TSSclassifier=strong | |||
|UniProt=Q5TBG1,Q5TBH1 | |||
|association_with_transcript=-90bp_to_ENST00000373596,ENST00000425237_5end | |||
|cluster_id=chr9:127023648..127023661,+ | |||
|description=CAGE_peak_11_at_NEK6_5end | |||
|id=chr9:127023648..127023661,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.43e-24!76;CL:0000738!2.84e-23!140;CL:0000839!5.46e-23!70;CL:0000557!1.12e-22!71;CL:0002031!8.57e-22!124;CL:0000037!4.49e-21!172;CL:0000566!4.49e-21!172;CL:0002032!4.96e-21!165;CL:0000837!4.96e-21!165;CL:0000988!1.74e-20!182;CL:0000763!1.79e-20!112;CL:0000049!1.79e-20!112;CL:0002009!3.21e-18!65;CL:0002194!8.98e-18!63;CL:0000576!8.98e-18!63;CL:0000040!8.98e-18!63;CL:0000559!8.98e-18!63;CL:0002087!1.12e-17!119;CL:0002057!1.54e-12!42;CL:0000860!3.20e-11!45;CL:0000945!2.34e-09!24;CL:0000826!2.34e-09!24;CL:0002274!2.21e-08!5;CL:0000457!2.21e-08!5;CL:0002191!2.21e-08!5;CL:0000097!2.21e-08!5;CL:0000831!2.21e-08!5;CL:0002028!2.21e-08!5;CL:0000134!1.16e-07!358;CL:0002320!4.08e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.30e-17;5!CL:0000163;7.56e-10;9!CL:0000235;4.92e-09;6!CL:0000840;5.41e-09;5!CL:0000766;9.01e-09;69!CL:0000775;1.10e-08;3!CL:0000081;2.90e-08;11!CL:0000094;7.21e-07;8!CL:0000738;7.38e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.32e-23,72;CL:0000097,7.63e-18,5;CL:0002028,7.63e-18,5;CL:0000738,1.03e-17,136;CL:0000839,3.15e-17,66;CL:0000557,6.35e-17,67;CL:0002031,3.82e-15,120;CL:0002032,3.48e-14,161;CL:0000837,3.48e-14,161;CL:0000763,7.14e-14,108;CL:0000049,7.14e-14,108;CL:0000988,9.70e-14,177;CL:0000037,2.20e-13,168;CL:0002194,1.40e-10,59;CL:0000576,1.40e-10,59;CL:0000040,1.40e-10,59;CL:0000559,1.40e-10,59;CL:0002009,3.64e-10,61;CL:0000163,5.66e-10,9;CL:0002087,8.72e-10,115;CL:0000840,4.74e-09,5;CL:0001029,4.74e-09,5;CL:0000235,5.43e-09,6;CL:0000775,1.01e-08,3;CL:0000081,3.17e-08,11;CL:0000094,7.01e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:630,7.82e-07,1;DOID:0050177,7.82e-07,1;DOID:0050427,7.82e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.35e-31!102;UBERON:0003061!3.35e-31!102;UBERON:0002193!1.73e-30!112;UBERON:0002371!7.30e-21!80;UBERON:0001474!1.90e-18!86;UBERON:0002405!9.64e-18!115;UBERON:0004765!9.60e-14!101;UBERON:0001434!9.60e-14!101;UBERON:0003081!1.75e-12!216;UBERON:0000178!7.93e-11!15;UBERON:0000179!7.93e-11!15;UBERON:0000463!7.93e-11!15;UBERON:0002204!7.59e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.61e-22;15!UBERON:0000179;1.61e-22;15!UBERON:0000463;1.61e-22;15!UBERON:0002390;2.07e-09;32!UBERON:0002193;4.99e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.18e-26,98;UBERON:0003061,1.18e-26,98;UBERON:0002193,6.23e-26,108;UBERON:0000178,1.12e-22,15;UBERON:0000179,1.12e-22,15;UBERON:0000463,1.12e-22,15;UBERON:0002371,1.51e-14,76;UBERON:0001474,3.00e-13,82;UBERON:0002405,6.87e-13,93;UBERON:0004765,8.66e-12,90;UBERON:0003081,2.19e-11,203;UBERON:0001434,2.72e-10,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0.487932798790507,0,0,0.313454721478088,0,0.136874425072884,0.251085279189606,0.382067028739756,0.328402357799783,0.472264687882075,0,0,0.154816123316076,0,0,0,0.0774672005803016,0.142169232487422,0,1.10799081706375,0.200544447470142,0,1.79132379391939,0.647787332037959,0,0.726991193897824,1.13362783106643,0,0.464858073811369,0,0.619412741790207,0,0.768482119587302,0.47296445977717,0,0,0,1.12945403725563,1.09162460023138,0.224723484445085,0,0.320929027076094,0,0.659702600373432,0.398927315243264,0.426224750532694,0,1.13477044938228,0.622822248995575,0.75374599577023,0,0.217188844705117,0.605399502633369,0.368277635987565,0.632924774881769,0,0,0,0.112328631146495,0,0.32145117339416,0,0,0,1.75996244461323,1.63841583378639,0.889509253863555,1.28019066769952,0,0,0.661044872784862,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,1.5905718941022,0,0.283604451492204,0.221729397462564,0,0.130979075497713,0,0,2.92092654289215,1.56716763569341,3.72282289452822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0.144366447761074,0,0,0,0,1.23108503043699,5.85010662848094,2.67536092119711,0,0,0,0,0,0,0.985326475791887,1.40877494421162,2.48793738648926,1.44119953416961,1.8936365013957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0.239624855491583,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99602809578873,0,4.14415513436035,0,0,0,0,0,0,0,0.601892199455438,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0.256450125116389,0.656029291399411,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.52234282769651,3.82318603571188,3.41788312304498,1.19115887728894,0.822724546172388,1.94541993357815,3.7802200606668,1.58625035258854,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0.456469358066384,0,0,0,0,0,0.425846237690326,0.343505344755765,0.614481528616916,0.671028323677248,0.667396566847634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,2.86352311006033,0.123084805461069,0,0,0,0.511572370226872,0.0986434056369336,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470940769185074,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0.0607495566580247,0,0.0788057072991982,0,0.211200673038813,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0.113312091520126,0.146552233678082,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0.496166021811951,0,1.33971858218986,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0.453692771289717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0.337884881306145,0.256241518587947,0,0.303859956177382,0,0.194860308839388,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0,0.193373663920732,0.199882311849858,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0.535928260312357,0,0,0,0,0.129177819672012,0.124149428591716,0,0,0,0,0,1.01028079521881,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,1.60284246151616 | |||
|short_description=p11@NEK6 | |||
}} |
Latest revision as of 00:05, 25 September 2015
Short description: | p11@NEK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_NEK6_5end |
Coexpression cluster: | NA |
Association with transcript: | -90bp_to_ENST00000373596, ENST00000425237_5end |
EntrezGene: | NEK6 |
HGNC: | 7749 |
UniProt: | Q5TBG1Q5TBH1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 9.32e-23 | 72 |
mast cell | 7.63e-18 | 5 |
basophil mast progenitor cell | 7.63e-18 | 5 |
leukocyte | 1.03e-17 | 136 |
myeloid lineage restricted progenitor cell | 3.15e-17 | 66 |
granulocyte monocyte progenitor cell | 6.35e-17 | 67 |
hematopoietic lineage restricted progenitor cell | 3.82e-15 | 120 |
hematopoietic oligopotent progenitor cell | 3.48e-14 | 161 |
hematopoietic multipotent progenitor cell | 3.48e-14 | 161 |
myeloid cell | 7.14e-14 | 108 |
common myeloid progenitor | 7.14e-14 | 108 |
hematopoietic cell | 9.70e-14 | 177 |
hematopoietic stem cell | 2.20e-13 | 168 |
monopoietic cell | 1.40e-10 | 59 |
monocyte | 1.40e-10 | 59 |
monoblast | 1.40e-10 | 59 |
promonocyte | 1.40e-10 | 59 |
macrophage dendritic cell progenitor | 3.64e-10 | 61 |
endocrine cell | 5.66e-10 | 9 |
nongranular leukocyte | 8.72e-10 | 115 |
immature conventional dendritic cell | 4.74e-09 | 5 |
common dendritic progenitor | 4.74e-09 | 5 |
macrophage | 5.43e-09 | 6 |
neutrophil | 1.01e-08 | 3 |
blood cell | 3.17e-08 | 11 |
granulocyte | 7.01e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.18e-26 | 98 |
blood island | 1.18e-26 | 98 |
hemolymphoid system | 6.23e-26 | 108 |
blood | 1.12e-22 | 15 |
haemolymphatic fluid | 1.12e-22 | 15 |
organism substance | 1.12e-22 | 15 |
bone marrow | 1.51e-14 | 76 |
bone element | 3.00e-13 | 82 |
immune system | 6.87e-13 | 93 |
skeletal element | 8.66e-12 | 90 |
lateral plate mesoderm | 2.19e-11 | 203 |
skeletal system | 2.72e-10 | 100 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 7.82e-07 | 1 |
monogenic disease | 7.82e-07 | 1 |
xeroderma pigmentosum | 7.82e-07 | 1 |